Atomistry » Calcium » PDB 1mts-1n7d » 1n6x
Atomistry »
  Calcium »
    PDB 1mts-1n7d »
      1n6x »

Calcium in PDB 1n6x: Rip-Phasing on Bovine Trypsin

Enzymatic activity of Rip-Phasing on Bovine Trypsin

All present enzymatic activity of Rip-Phasing on Bovine Trypsin:
3.4.21.4;

Protein crystallography data

The structure of Rip-Phasing on Bovine Trypsin, PDB code: 1n6x was solved by R.B.G.Ravelli, H.-K.S.Leiros, B.Pan, M.Caffrey, S.Mcsweeney, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.89 / 1.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.209, 56.658, 66.126, 90.00, 90.00, 90.00
R / Rfree (%) 13.8 / 16.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Rip-Phasing on Bovine Trypsin (pdb code 1n6x). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Rip-Phasing on Bovine Trypsin, PDB code: 1n6x:

Calcium binding site 1 out of 1 in 1n6x

Go back to Calcium Binding Sites List in 1n6x
Calcium binding site 1 out of 1 in the Rip-Phasing on Bovine Trypsin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Rip-Phasing on Bovine Trypsin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:8.8
occ:1.00
OE1 A:GLU70 2.2 9.6 1.0
O A:VAL75 2.3 10.0 1.0
OE2 A:GLU80 2.3 9.9 1.0
O A:ASN72 2.3 9.6 1.0
O A:HOH1123 2.3 10.1 1.0
O A:HOH1124 2.4 9.9 1.0
CD A:GLU70 3.3 9.1 1.0
CD A:GLU80 3.4 10.1 1.0
C A:VAL75 3.4 9.4 1.0
C A:ASN72 3.5 9.4 1.0
OE2 A:GLU70 3.7 9.5 1.0
CG A:GLU80 3.7 10.6 1.0
CA A:VAL76 4.1 11.0 1.0
N A:GLU77 4.1 11.2 1.0
N A:VAL76 4.2 10.9 1.0
N A:VAL75 4.2 8.6 1.0
CA A:ILE73 4.3 9.7 1.0
OE1 A:GLU77 4.3 11.9 1.0
N A:ILE73 4.3 9.4 1.0
N A:ASN72 4.4 9.4 1.0
CA A:VAL75 4.4 9.2 1.0
CA A:ASN72 4.5 9.3 1.0
O A:HOH1135 4.5 12.2 1.0
OE1 A:GLU80 4.5 11.1 1.0
C A:ILE73 4.5 8.4 1.0
CG A:GLU77 4.5 12.7 1.0
N A:ASP71 4.6 8.8 1.0
C A:VAL76 4.6 12.0 1.0
CG A:GLU70 4.6 8.5 1.0
CA A:GLU70 4.7 8.6 1.0
CB A:GLU77 4.8 12.8 1.0
CD A:GLU77 4.8 13.6 1.0
CB A:ASN72 4.9 9.6 1.0
CB A:GLU70 4.9 9.1 1.0
N A:ASN74 4.9 9.0 1.0
O A:ILE73 4.9 9.1 1.0

Reference:

R.B.G.Ravelli, H.-K.S.Leiros, B.Pan, M.Caffrey, S.Mcsweeney. Specific Radiation-Damage Can Be Used to Solve Macromolecular Crystal Structures Structure V. 11 217 2003.
ISSN: ISSN 0969-2126
PubMed: 12575941
DOI: 10.1016/S0969-2126(03)00006-6
Page generated: Thu Jul 11 12:44:45 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy