Calcium in PDB 1nmb: The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody

Enzymatic activity of The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody

All present enzymatic activity of The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody:
3.2.1.18;

Protein crystallography data

The structure of The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody, PDB code: 1nmb was solved by R.L.Malby, W.R.Tulip, P.M.Colman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	6.00 / 2.20
*Space group*	I 4 2 2
*Cell size a, b, c (Å), α, β, γ (°)*	169.400, 169.400, 156.900, 90.00, 90.00, 90.00
*R / R_free (%)*	21 / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody (pdb code 1nmb). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody, PDB code: 1nmb:

Calcium binding site 1 out of 1 in 1nmb

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Calcium Binding Sites List in 1nmb

Calcium binding site 1 out of 1 in the The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody

Mono view

Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
N:Ca478 b:5.3 occ:1.00	O	N:GLY297	2.3	11.1	1.0
	O	N:ASP293	2.4	4.5	1.0
	O	N:HOH499	2.6	4.3	1.0
	O	N:ASN347	2.6	9.1	1.0
	OD2	N:ASP324	3.1	4.2	1.0
	C	N:GLY297	3.5	9.7	1.0
	C	N:ASP293	3.5	3.8	1.0
	CG	N:ASP324	3.7	2.6	1.0
	C	N:ASN347	3.9	7.4	1.0
	CA	N:ASN294	4.1	5.1	1.0
	O	N:ASN294	4.1	2.4	1.0
	OD1	N:ASP324	4.2	2.0	1.0
	O	N:HOH538	4.2	21.2	1.0
	C	N:ASN294	4.2	6.4	1.0
	N	N:ASN294	4.3	3.7	1.0
	CA	N:GLY348	4.3	6.9	1.0
	N	N:GLY297	4.3	15.4	1.0
	CA	N:GLY297	4.4	12.1	1.0
	N	N:SER298	4.4	9.8	1.0
	CA	N:SER298	4.6	6.6	1.0
	N	N:GLY348	4.6	6.8	1.0
	CB	N:ASP324	4.6	3.3	1.0
	CA	N:ASP293	4.6	5.0	1.0
	CB	N:ASP293	4.7	8.7	1.0
	N	N:ASP293	4.8	4.5	1.0
	N	N:ASN347	4.9	8.8	1.0
	C	N:GLN296	4.9	16.2	1.0
	CA	N:ASN347	5.0	5.8	1.0

Reference:

R.L.Malby, W.R.Tulip, V.R.Harley, J.L.Mckimm-Breschkin, W.G.Laver, R.G.Webster, P.M.Colman. The Structure of A Complex Between the NC10 Antibody and Influenza Virus Neuraminidase and Comparison with the Overlapping Binding Site of the NC41 Antibody Structure V. 2 733 1994.
ISSN: ISSN 0969-2126
PubMed: 7994573
DOI: 10.1016/S0969-2126(00)00074-5

Page generated: Thu Jul 11 12:57:36 2024

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