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Calcium in PDB 1osa: Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution

Protein crystallography data

The structure of Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution, PDB code: 1osa was solved by M.Sundaralingam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.68
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 29.890, 53.420, 25.350, 93.67, 96.88, 89.24
R / Rfree (%) 19.4 / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution (pdb code 1osa). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution, PDB code: 1osa:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 1osa

Go back to Calcium Binding Sites List in 1osa
Calcium binding site 1 out of 4 in the Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca149

b:3.6
occ:1.00
O A:THR26 2.1 2.0 1.0
OD1 A:ASP24 2.3 13.7 1.0
OD1 A:ASP20 2.3 2.0 1.0
OE1 A:GLU31 2.4 6.2 1.0
OD1 A:ASP22 2.5 13.8 1.0
OE2 A:GLU31 2.5 5.4 1.0
O A:HOH153 2.6 10.2 1.0
CD A:GLU31 2.8 11.2 1.0
CG A:ASP24 3.3 11.9 1.0
C A:THR26 3.4 2.0 1.0
CG A:ASP20 3.4 6.8 1.0
CG A:ASP22 3.6 15.0 1.0
OD2 A:ASP24 4.0 8.0 1.0
OG1 A:THR26 4.0 9.2 1.0
CA A:ASP20 4.1 4.3 1.0
N A:THR26 4.1 2.0 1.0
CB A:ASP20 4.2 5.5 1.0
N A:ASP24 4.2 6.2 1.0
OD2 A:ASP20 4.2 9.8 1.0
OD2 A:ASP22 4.3 16.9 1.0
CA A:THR26 4.3 5.1 1.0
CB A:ASP24 4.3 8.5 1.0
N A:ASP22 4.3 12.5 1.0
CG A:GLU31 4.3 10.7 1.0
C A:ASP20 4.4 9.6 1.0
N A:ILE27 4.4 4.6 1.0
N A:GLY23 4.5 11.8 1.0
CA A:ILE27 4.5 3.7 1.0
N A:LYS21 4.5 9.9 1.0
O A:HOH229 4.6 35.5 1.0
O A:HOH200 4.7 27.0 1.0
CB A:ASP22 4.7 11.8 1.0
CA A:ASP24 4.8 3.5 1.0
N A:GLY25 4.8 2.2 1.0
CB A:THR26 4.8 3.9 1.0
CA A:ASP22 4.8 14.3 1.0
O A:ASP20 4.9 12.7 1.0
C A:ASP22 4.9 11.9 1.0

Calcium binding site 2 out of 4 in 1osa

Go back to Calcium Binding Sites List in 1osa
Calcium binding site 2 out of 4 in the Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca150

b:7.8
occ:1.00
O A:THR62 2.2 8.2 1.0
OD1 A:ASP58 2.2 10.9 1.0
OD1 A:ASP56 2.2 10.5 1.0
O A:HOH157 2.2 34.3 1.0
OD1 A:ASN60 2.3 14.2 1.0
OE1 A:GLU67 2.4 6.5 1.0
OE2 A:GLU67 2.6 5.4 1.0
CD A:GLU67 2.9 9.4 1.0
CG A:ASP58 3.2 15.9 1.0
CG A:ASN60 3.3 18.3 1.0
CG A:ASP56 3.4 15.1 1.0
C A:THR62 3.4 3.4 1.0
OD2 A:ASP58 3.6 16.8 1.0
O A:HOH201 3.7 17.1 1.0
ND2 A:ASN60 3.9 12.2 1.0
OD2 A:ASP56 4.2 16.0 1.0
N A:ASN60 4.2 17.6 1.0
N A:ASP58 4.3 21.6 1.0
N A:ILE63 4.4 8.1 1.0
CG A:GLU67 4.4 9.2 1.0
N A:THR62 4.4 8.6 1.0
CB A:ASP56 4.4 14.6 1.0
CA A:ASP56 4.4 14.7 1.0
CB A:ASP58 4.4 15.4 1.0
CA A:ILE63 4.4 5.6 1.0
N A:GLY59 4.5 18.9 1.0
CB A:ASN60 4.5 15.5 1.0
CA A:THR62 4.5 9.6 1.0
C A:ASP56 4.6 15.8 1.0
N A:ALA57 4.6 15.2 1.0
N A:ASP64 4.7 8.3 1.0
OD2 A:ASP64 4.7 15.3 1.0
CA A:ASP58 4.7 20.3 1.0
O A:HOH158 4.7 27.3 1.0
OG1 A:THR62 4.8 9.4 1.0
CA A:ASN60 4.8 15.1 1.0
C A:ASP58 4.8 20.3 1.0
CG A:ASP64 4.9 9.3 1.0
N A:GLY61 4.9 10.2 1.0
C A:ILE63 5.0 5.3 1.0

Calcium binding site 3 out of 4 in 1osa

Go back to Calcium Binding Sites List in 1osa
Calcium binding site 3 out of 4 in the Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca151

b:15.5
occ:1.00
O A:LEU99 2.1 16.7 1.0
OD1 A:ASP93 2.2 19.5 1.0
O A:HOH189 2.4 27.4 1.0
OE1 A:GLU104 2.4 13.6 1.0
OD1 A:ASP95 2.4 25.9 1.0
OD1 A:ASN97 2.4 16.6 1.0
OE2 A:GLU104 2.5 12.8 1.0
CD A:GLU104 2.8 13.5 1.0
CG A:ASP95 3.3 26.8 1.0
C A:LEU99 3.3 16.9 1.0
CG A:ASP93 3.4 18.4 1.0
CG A:ASN97 3.5 11.7 1.0
OD2 A:ASP95 3.7 27.0 1.0
OD2 A:ASP93 4.1 20.2 1.0
N A:LEU99 4.2 15.5 1.0
N A:ASN97 4.2 20.7 1.0
N A:ASP95 4.2 20.1 1.0
N A:ILE100 4.2 10.5 1.0
ND2 A:ASN97 4.2 13.6 1.0
CA A:LEU99 4.3 14.7 1.0
CA A:ILE100 4.3 12.9 1.0
CG A:GLU104 4.3 8.8 1.0
CA A:ASP93 4.3 15.8 1.0
CB A:ASP93 4.4 16.2 1.0
C A:ASP93 4.4 19.1 1.0
CB A:ASP95 4.4 23.8 1.0
N A:SER101 4.5 10.2 1.0
CB A:ASN97 4.5 17.4 1.0
N A:ARG94 4.6 19.4 1.0
CB A:LEU99 4.6 15.6 1.0
CA A:ASP95 4.7 21.6 1.0
N A:GLY96 4.7 22.0 1.0
CA A:ASN97 4.8 16.7 1.0
C A:ILE100 4.8 16.1 1.0
O A:ASP93 4.8 20.2 1.0
O A:HOH276 4.9 55.8 1.0
C A:ASP95 4.9 22.2 1.0
N A:GLY98 4.9 18.3 1.0

Calcium binding site 4 out of 4 in 1osa

Go back to Calcium Binding Sites List in 1osa
Calcium binding site 4 out of 4 in the Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Crystal Structure of Recombinant Paramecium Tetraurelia Calmodulin at 1.68 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca152

b:10.0
occ:1.00
OD1 A:ASP129 2.0 9.0 1.0
OD1 A:ASP131 2.1 17.7 1.0
OD1 A:ASP133 2.2 14.1 1.0
O A:HOH181 2.2 13.2 1.0
O A:HIS135 2.3 16.5 1.0
OE1 A:GLU140 2.5 17.5 1.0
OE2 A:GLU140 2.7 17.2 1.0
CD A:GLU140 3.0 15.9 1.0
CG A:ASP131 3.2 18.7 1.0
CG A:ASP129 3.2 10.7 1.0
CG A:ASP133 3.3 15.6 1.0
C A:HIS135 3.5 16.2 1.0
OD2 A:ASP131 3.7 18.8 1.0
OD2 A:ASP133 3.8 14.5 1.0
OD2 A:ASP129 3.9 15.4 1.0
N A:ASP133 4.1 20.8 1.0
N A:HIS135 4.1 14.9 1.0
N A:ASP131 4.2 17.5 1.0
CB A:ASP129 4.2 9.2 1.0
CA A:HIS135 4.3 15.6 1.0
CA A:ASP129 4.4 12.2 1.0
N A:GLY132 4.4 20.9 1.0
N A:ILE136 4.4 15.1 1.0
CB A:ASP131 4.4 20.7 1.0
N A:ILE130 4.4 16.9 1.0
CG A:GLU140 4.5 15.9 1.0
CB A:ASP133 4.5 17.1 1.0
CA A:ILE136 4.5 13.4 1.0
N A:ASN137 4.5 9.0 1.0
CA A:ASP131 4.6 18.3 1.0
N A:GLY134 4.7 17.0 1.0
C A:ASP131 4.7 19.9 1.0
CA A:ASP133 4.7 18.2 1.0
CB A:HIS135 4.8 11.8 1.0
C A:ASP129 4.9 15.2 1.0
C A:ASP133 4.9 17.4 1.0
C A:ILE136 4.9 12.8 1.0

Reference:

C.Ban, B.Ramakrishnan, K.Y.Ling, C.Kung, M.Sundaralingam. Structure of the Recombinant Paramecium Tetraurelia Calmodulin at 1.68 A Resolution. Acta Crystallogr.,Sect.D V. 50 50 1994.
ISSN: ISSN 0907-4449
PubMed: 15299476
DOI: 10.1107/S0907444993007991
Page generated: Thu Jul 11 13:29:02 2024

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