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Calcium in PDB 1q55: W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography

Calcium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 48;

Binding sites:

The binding sites of Calcium atom in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography (pdb code 1q55). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 48 binding sites of Calcium where determined in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography, PDB code: 1q55:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Calcium binding site 1 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 1 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca905

b:22.4
occ:1.00
 CA B:SER508 0.2 0.0 1.0
CB B:ARG443 0.7 95.2 1.0
N B:ASN526 0.8 0.0 1.0
CG B:ARG443 0.8 95.2 1.0
NZ A:LYS107 0.9 100.0 1.0
CD A:LYS107 1.0 100.0 1.0
C B:VAL525 1.1 0.0 1.0
O A:ARG105 1.1 90.2 1.0
CG A:LYS107 1.2 100.0 1.0
CB A:LYS107 1.2 100.0 1.0
CE A:LYS107 1.2 100.0 1.0
N B:SER508 1.2 0.0 1.0
OD1 A:ASN102 1.3 55.7 1.0
C B:SER508 1.4 0.0 1.0
CA B:VAL525 1.4 0.0 1.0
C A:ARG105 1.5 90.2 1.0
O A:ASN104 1.5 47.5 1.0
CB B:SER508 1.5 76.8 1.0
OD1 A:ASN143 1.6 34.4 1.0
OD2 A:ASP134 1.6 51.6 1.0
CA B:ARG443 1.7 83.8 1.0
O B:SER508 1.7 0.0 1.0
CG A:ASN143 1.8 34.4 1.0
CA B:ASN526 1.8 0.0 1.0
NH1 B:ARG443 1.8 95.2 1.0
C A:PRO106 1.9 47.0 1.0
CD B:ARG443 1.9 95.2 1.0
N A:PRO106 1.9 47.0 1.0
O B:ARG443 1.9 83.8 1.0
CA A:PRO106 1.9 47.0 1.0
CG A:ASP134 1.9 51.6 1.0
O A:PRO106 1.9 47.0 1.0
O A:ASN143 2.0 41.2 1.0
OD1 A:ASP134 2.0 51.6 1.0
CB A:ASN143 2.0 34.4 1.0
N B:VAL525 2.0 0.0 1.0
O B:VAL525 2.1 0.0 1.0
CA A:ASN143 2.2 41.2 1.0
N B:ILE509 2.3 85.9 1.0
CG A:ASN102 2.3 55.7 1.0
ND2 A:ASN143 2.3 34.4 1.0
C B:TYR507 2.3 0.0 1.0
CA A:LYS107 2.3 33.5 1.0
N A:LYS107 2.3 33.5 1.0
OG B:SER508 2.4 76.8 1.0
C B:ARG443 2.4 83.8 1.0
C A:ASN104 2.5 47.5 1.0
OD1 B:ASN526 2.6 97.7 1.0
N B:ARG443 2.6 83.8 1.0
CD2 B:LEU481 2.7 72.1 1.0
OD2 A:ASP136 2.7 42.7 1.0
C A:ASN143 2.7 41.2 1.0
CA A:ARG105 2.7 90.2 1.0
CB B:VAL525 2.7 54.0 1.0
OD2 A:ASP195 2.8 34.4 1.0
CB A:ASN102 2.8 55.7 1.0
C B:VAL524 2.8 0.0 1.0
O B:TYR507 2.8 0.0 1.0
CZ B:ARG443 2.9 95.2 1.0
CB B:ASN526 2.9 97.7 1.0
NE B:ARG443 2.9 95.2 1.0
N A:ARG105 2.9 90.2 1.0
OD1 A:ASP195 2.9 34.4 1.0
O B:VAL524 3.0 0.0 1.0
C B:ASN526 3.0 0.0 1.0
CG B:ASN526 3.0 97.7 1.0
CG1 B:VAL525 3.1 54.0 1.0
O B:SER441 3.1 0.0 1.0
CD A:PRO106 3.2 47.0 1.0
CG A:ASP195 3.2 34.4 1.0
N A:ASN143 3.2 41.2 1.0
CB B:TYR507 3.3 0.0 1.0
O A:THR133 3.3 87.0 1.0
CB A:ASP134 3.3 51.6 1.0
CA A:ASN102 3.3 33.5 1.0
CG2 B:VAL525 3.3 54.0 1.0
CB A:PRO106 3.3 47.0 1.0
CA B:TYR507 3.3 0.0 1.0
ND2 A:ASN102 3.3 55.7 1.0
CD1 B:TYR507 3.4 0.0 1.0
CA A:ASP134 3.4 47.4 1.0
O B:ASN526 3.4 0.0 1.0
C B:PRO442 3.5 82.0 1.0
CA A:ASN104 3.5 47.5 1.0
CB A:ASN104 3.5 79.0 1.0
C A:LYS107 3.6 33.5 1.0
CG A:ASP136 3.6 42.7 1.0
CD2 A:LEU196 3.6 32.8 1.0
CB A:ASP136 3.6 42.7 1.0
CA B:ILE509 3.7 85.9 1.0
O B:PRO442 3.7 82.0 1.0
N B:VAL444 3.7 0.0 1.0
N B:ALA527 3.7 90.4 1.0
CG B:TYR507 3.8 0.0 1.0
OD1 A:ASP111 3.8 85.6 1.0
CA B:VAL524 3.8 0.0 1.0
CG B:LEU481 3.9 72.1 1.0
CG A:ASP111 3.9 85.6 1.0
N A:ASN102 3.9 33.5 1.0
CB A:ASP111 3.9 85.6 1.0
CG2 B:ILE509 3.9 50.8 1.0
CB A:ARG105 4.0 71.2 1.0
CG A:PRO106 4.0 47.0 1.0
NH2 B:ARG443 4.0 95.2 1.0
N A:GLY144 4.0 31.3 1.0
N A:PHE108 4.1 20.8 1.0
CB B:VAL524 4.1 0.0 1.0
N A:ASN104 4.1 47.5 1.0
N A:GLU135 4.2 26.0 1.0
C B:SER441 4.2 0.0 1.0
C A:LEU142 4.2 73.0 1.0
O A:LYS107 4.3 33.5 1.0
OD2 A:ASP111 4.3 85.6 1.0
O A:PHE108 4.3 20.8 1.0
C A:THR133 4.3 87.0 1.0
CA B:PRO442 4.3 82.0 1.0
ND2 B:ASN526 4.3 97.7 1.0
O B:ILE509 4.3 85.9 1.0
C A:ASP134 4.3 47.4 1.0
OG A:SER141 4.4 71.4 1.0
CG A:ARG105 4.4 71.2 1.0
CB A:SER141 4.4 71.4 1.0
C A:ASN102 4.4 33.5 1.0
O B:PRO440 4.4 75.5 1.0
O A:LEU142 4.5 73.0 1.0
C B:ILE509 4.5 85.9 1.0
N A:ASP134 4.5 47.4 1.0
CB B:ILE509 4.5 50.8 1.0
CE1 B:TYR507 4.5 0.0 1.0
CD1 B:LEU481 4.5 72.1 1.0
CA B:VAL444 4.6 0.0 1.0
CB A:ASP195 4.6 34.4 1.0
CA A:GLY144 4.7 31.3 1.0
CG2 B:VAL444 4.7 56.0 1.0
N B:TYR507 4.7 0.0 1.0
N A:ASP136 4.7 14.1 1.0
CG1 B:VAL524 4.7 0.0 1.0
OD1 A:ASP136 4.8 42.7 1.0
C A:GLN101 4.8 43.4 1.0
N A:LEU142 4.8 73.0 1.0
OD1 A:ASP100 4.8 34.3 1.0
N B:PRO442 4.9 82.0 1.0
CG A:ASN104 4.9 79.0 1.0
N A:ASP103 4.9 73.5 1.0
C1 B:NAG904 4.9 27.2 0.5
CB B:LEU481 4.9 72.1 1.0
CG A:LEU196 4.9 32.8 1.0
CA A:ASP136 4.9 14.1 1.0
CA A:ASP111 4.9 61.7 1.0

Calcium binding site 2 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 2 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca906

b:5.0
occ:1.00
 O A:ASP100 0.8 42.9 1.0
N A:GLN101 0.9 43.4 1.0
ND2 A:ASN104 0.9 79.0 1.0
CG1 B:VAL444 0.9 56.0 1.0
C A:ASP100 0.9 42.9 1.0
NZ B:LYS503 1.0 100.0 1.0
CD B:LYS503 1.2 100.0 1.0
CE B:LYS503 1.3 100.0 1.0
O B:ALA527 1.3 90.4 1.0
CB B:VAL444 1.4 56.0 1.0
N B:THR528 1.5 87.7 1.0
C B:ALA527 1.5 90.4 1.0
O B:GLY505 1.6 0.0 1.0
OD1 A:ASP136 1.7 42.7 1.0
CG A:ASN104 1.8 79.0 1.0
OE2 A:GLU69 1.8 15.8 1.0
CA A:ASP100 1.9 42.9 1.0
CD A:GLU69 2.0 15.8 1.0
CA A:GLN101 2.0 43.4 1.0
OD2 A:ASP103 2.0 33.9 1.0
O A:GLN101 2.0 43.4 1.0
N B:ASP506 2.0 0.0 1.0
OD1 A:ASN104 2.0 79.0 1.0
C B:GLY505 2.1 0.0 1.0
CD2 B:TYR507 2.1 0.0 1.0
CA B:VAL444 2.2 0.0 1.0
C B:ASP506 2.2 0.0 1.0
OE1 A:GLU11 2.2 21.0 1.0
N B:TYR507 2.2 0.0 1.0
OD1 A:ASP100 2.3 34.3 1.0
CA B:ASP506 2.3 0.0 1.0
CA B:THR528 2.4 87.7 1.0
CG A:ASP100 2.4 34.3 1.0
CG2 B:VAL444 2.4 56.0 1.0
C B:VAL444 2.4 0.0 1.0
CA B:ALA527 2.5 90.4 1.0
OG1 B:THR528 2.5 88.7 1.0
OE1 A:GLU69 2.5 15.8 1.0
OE1 A:GLU135 2.5 99.1 1.0
CG A:GLU69 2.6 15.8 1.0
C A:GLN101 2.7 43.4 1.0
O B:VAL444 2.7 0.0 1.0
CG B:LYS503 2.7 100.0 1.0
N B:ALA527 2.8 90.4 1.0
CG A:ASP103 2.8 33.9 1.0
N A:ASP100 2.8 42.9 1.0
OD2 A:ASP100 2.8 34.3 1.0
CB A:GLN101 2.8 71.4 1.0
N B:PHE445 2.8 97.2 1.0
CB A:ASP100 2.8 34.3 1.0
CG A:ASP136 2.9 42.7 1.0
CG2 A:ILE99 2.9 36.3 1.0
O B:ASP506 2.9 0.0 1.0
CB B:THR528 2.9 88.7 1.0
CB B:LYS503 2.9 100.0 1.0
OD1 A:ASP103 3.0 33.9 1.0
O B:PHE445 3.0 97.2 1.0
O A:ILE99 3.0 22.6 1.0
CB A:ASN104 3.0 79.0 1.0
CG B:TYR507 3.0 0.0 1.0
C A:ILE99 3.1 22.6 1.0
CE2 B:TYR507 3.1 0.0 1.0
N B:VAL444 3.1 0.0 1.0
CA B:GLY505 3.2 0.0 1.0
CB B:TYR507 3.2 0.0 1.0
CA B:TYR507 3.3 0.0 1.0
CG A:GLN101 3.4 71.4 1.0
CD A:GLU11 3.4 21.0 1.0
OE2 A:GLU11 3.5 21.0 1.0
CD A:GLU135 3.5 99.1 1.0
CB A:GLU135 3.5 99.1 1.0
C B:ASN526 3.5 0.0 1.0
CB A:ILE99 3.6 36.3 1.0
O B:ASN526 3.6 0.0 1.0
C B:THR528 3.6 87.7 1.0
CB B:ASP506 3.7 100.0 1.0
OD2 A:ASP136 3.7 42.7 1.0
O B:TYR507 3.7 0.0 1.0
CB B:ALA527 3.8 90.4 1.0
CB A:ASP136 3.8 42.7 1.0
N B:GLY505 3.8 0.0 1.0
OD1 B:ASP506 3.8 100.0 1.0
N A:ASN102 3.8 33.5 1.0
C B:PHE445 3.8 97.2 1.0
CA B:PHE445 3.9 97.2 1.0
N B:VAL529 3.9 0.0 1.0
CA A:ASP136 4.0 14.1 1.0
CD A:ARG68 4.0 39.4 1.0
CG B:ASP506 4.0 100.0 1.0
CB A:GLU69 4.0 15.8 1.0
C B:TYR507 4.0 0.0 1.0
N A:ASN104 4.0 47.5 1.0
N A:ASP103 4.1 73.5 1.0
CG A:ARG68 4.1 39.4 1.0
CA A:ASN104 4.1 47.5 1.0
N A:ASP136 4.1 14.1 1.0
NE A:ARG68 4.2 39.4 1.0
CA A:CA907 4.2 15.4 1.0
CA A:ILE99 4.2 22.6 1.0
C B:ARG443 4.2 83.8 1.0
CG A:GLU135 4.2 99.1 1.0
OE2 A:GLU135 4.2 99.1 1.0
CB A:ASP103 4.2 33.9 1.0
CB B:ASN526 4.2 97.7 1.0
CG2 B:THR528 4.3 88.7 1.0
ND2 A:ASN143 4.3 34.4 1.0
C B:LYS504 4.3 0.0 1.0
OG A:SER10 4.3 46.9 1.0
CA B:LYS503 4.3 0.0 1.0
O B:LYS503 4.3 0.0 1.0
C B:LYS503 4.3 0.0 1.0
CD1 B:TYR507 4.3 0.0 1.0
CZ B:TYR507 4.4 0.0 1.0
C A:GLU135 4.4 26.0 1.0
CD1 A:ILE99 4.4 36.3 1.0
O B:THR528 4.4 87.7 1.0
O B:ARG443 4.5 83.8 1.0
OD2 B:ASP506 4.5 100.0 1.0
O B:LYS504 4.5 0.0 1.0
N B:LYS504 4.5 0.0 1.0
CA B:ASN526 4.5 0.0 1.0
CG2 B:VAL529 4.6 80.4 1.0
C A:ASP103 4.6 73.5 1.0
CG A:GLU11 4.6 21.0 1.0
OD2 A:ASP67 4.6 32.7 1.0
CA A:GLU135 4.6 26.0 1.0
CA A:ASP103 4.6 73.5 1.0
CA A:ASN102 4.7 33.5 1.0
CB A:GLU11 4.7 21.0 1.0
CG1 A:ILE99 4.7 36.3 1.0
CD A:GLN101 4.7 71.4 1.0
O A:GLU135 4.8 26.0 1.0
CB B:PHE445 4.8 0.0 1.0
CE1 B:TYR507 4.9 0.0 1.0
N B:LYS503 5.0 0.0 1.0

Calcium binding site 3 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 3 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca907

b:15.4
occ:1.00
 C B:LYS503 0.5 0.0 1.0
O B:LYS503 0.7 0.0 1.0
OG A:SER10 0.8 46.9 1.0
O B:THR528 0.9 87.7 1.0
C B:THR528 1.0 87.7 1.0
N B:VAL529 1.1 0.0 1.0
CA B:LYS503 1.2 0.0 1.0
O B:PHE445 1.2 97.2 1.0
CB B:VAL529 1.3 80.4 1.0
CA B:VAL529 1.3 0.0 1.0
CD A:GLU11 1.3 21.0 1.0
N B:LYS504 1.4 0.0 1.0
CG A:GLU11 1.4 21.0 1.0
CB B:LYS503 1.4 100.0 1.0
CB A:SER10 1.4 46.9 1.0
C B:PHE445 1.4 97.2 1.0
CG2 B:VAL529 1.6 80.4 1.0
OG1 B:THR446 1.7 0.0 1.0
CB A:GLU11 1.7 21.0 1.0
CA B:THR446 1.7 0.0 1.0
N B:THR446 1.8 0.0 1.0
OD1 A:ASP103 1.8 33.9 1.0
CG B:LYS503 1.8 100.0 1.0
N A:GLU11 1.9 30.1 1.0
OE1 A:GLU11 2.0 21.0 1.0
OE2 A:GLU11 2.1 21.0 1.0
N B:GLY505 2.1 0.0 1.0
CA B:THR528 2.2 87.7 1.0
CA A:GLU11 2.2 30.1 1.0
O A:GLU11 2.2 30.1 1.0
OD2 A:ASP67 2.4 32.7 1.0
OE1 A:GLU69 2.4 15.8 1.0
CB B:THR446 2.4 0.0 1.0
CA B:LYS504 2.4 0.0 1.0
C A:GLU11 2.4 30.1 1.0
OD1 A:ASN12 2.5 43.9 1.0
CA A:SER10 2.5 38.6 1.0
N B:LYS503 2.6 0.0 1.0
CG1 B:VAL529 2.6 80.4 1.0
C B:VAL529 2.7 0.0 1.0
N B:THR528 2.7 87.7 1.0
CA B:GLY505 2.8 0.0 1.0
C A:SER10 2.8 38.6 1.0
C B:LYS504 2.8 0.0 1.0
CG A:ASP67 2.8 32.7 1.0
CG A:ASP103 2.9 33.9 1.0
CB B:THR528 2.9 88.7 1.0
CA B:PHE445 2.9 97.2 1.0
N B:MET447 2.9 86.8 1.0
CG A:ASN12 2.9 43.9 1.0
NE2 A:GLN101 2.9 71.4 1.0
O B:VAL529 3.0 0.0 1.0
OD1 A:ASP67 3.0 32.7 1.0
CD B:LYS503 3.1 100.0 1.0
C B:THR446 3.1 0.0 1.0
O B:VAL444 3.1 0.0 1.0
CB A:GLN101 3.1 71.4 1.0
ND2 A:ASN12 3.2 43.9 1.0
N A:ASN12 3.2 34.7 1.0
CE B:LYS503 3.2 100.0 1.0
CG A:GLN101 3.2 71.4 1.0
O A:ILE99 3.3 22.6 1.0
CD A:GLN101 3.4 71.4 1.0
OD2 A:ASP103 3.5 33.9 1.0
C B:LEU502 3.5 0.0 1.0
C B:ALA527 3.5 90.4 1.0
CG2 B:THR446 3.5 0.0 1.0
CG2 B:THR528 3.5 88.7 1.0
O B:ALA527 3.5 90.4 1.0
N B:PHE445 3.5 97.2 1.0
CB A:ASN12 3.6 43.9 1.0
N A:SER10 3.6 38.6 1.0
CB A:ASP103 3.6 33.9 1.0
CB B:LYS504 3.7 100.0 1.0
CD A:GLU69 3.7 15.8 1.0
N B:CYS530 3.7 0.0 1.0
O B:LEU502 3.7 0.0 1.0
C B:VAL444 3.7 0.0 1.0
C B:GLY505 3.8 0.0 1.0
O B:LYS504 3.8 0.0 1.0
CB B:PHE445 3.8 0.0 1.0
CB A:ASP67 3.9 32.7 1.0
O A:SER10 3.9 38.6 1.0
CE2 B:TYR507 3.9 0.0 1.0
N A:GLN101 4.0 43.4 1.0
CG B:LYS504 4.0 100.0 1.0
CB A:GLU69 4.0 15.8 1.0
CA A:ASP67 4.0 43.9 1.0
CA A:ASN12 4.1 34.7 1.0
O B:THR446 4.1 0.0 1.0
CG A:GLU69 4.1 15.8 1.0
CA A:GLN101 4.1 43.4 1.0
O B:MET447 4.1 86.8 1.0
ND2 A:ASN104 4.1 79.0 1.0
CA A:CA906 4.2 5.0 1.0
NZ B:LYS503 4.2 100.0 1.0
OE1 A:GLN101 4.2 71.4 1.0
O B:GLY505 4.2 0.0 1.0
SG B:CYS539 4.2 0.0 1.0
CA B:MET447 4.2 86.8 1.0
O A:LEU66 4.2 41.6 1.0
CB B:MET447 4.3 57.0 1.0
OG1 B:THR528 4.3 88.7 1.0
N B:ASP506 4.3 0.0 1.0
CG1 B:VAL444 4.4 56.0 1.0
C A:ASP100 4.4 42.9 1.0
CD2 B:TYR507 4.5 0.0 1.0
OD1 A:ASN104 4.5 79.0 1.0
N A:ARG68 4.5 51.6 1.0
C A:ILE99 4.5 22.6 1.0
OE2 A:GLU69 4.6 15.8 1.0
O A:GLN101 4.6 43.4 1.0
C B:MET447 4.6 86.8 1.0
C A:VAL9 4.6 14.4 1.0
O A:ASP100 4.6 42.9 1.0
CA B:ALA527 4.7 90.4 1.0
C A:ASN12 4.7 34.7 1.0
CA B:LEU502 4.7 0.0 1.0
C A:ASP67 4.7 43.9 1.0
CG A:ASN104 4.8 79.0 1.0
CD2 B:LEU502 4.8 100.0 1.0
O A:VAL9 4.8 14.4 1.0
C A:GLN101 4.8 43.4 1.0
CD B:LYS504 4.9 100.0 1.0
CG A:ARG68 4.9 39.4 1.0
CB A:ILE99 4.9 36.3 1.0
CB B:VAL444 5.0 56.0 1.0
CZ B:TYR507 5.0 0.0 1.0
N A:GLU69 5.0 33.9 1.0
CD1 A:ILE99 5.0 36.3 1.0
CG B:MET447 5.0 57.0 1.0

Calcium binding site 4 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 4 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca908

b:10.5
occ:1.00
 C B:LEU298 0.3 69.5 1.0
CE2 B:PHE290 0.3 99.0 1.0
CA A:ASP248 0.4 22.1 1.0
CA B:ALA356 0.4 52.5 1.0
CD2 B:TYR296 0.4 99.4 1.0
CZ2 A:TRP255 0.4 53.1 1.0
N B:GLN357 0.5 67.7 1.0
NE1 A:TRP255 0.6 53.1 1.0
N B:GLU349 0.6 68.4 1.0
CB B:PHE290 0.6 99.0 1.0
CD1 B:LEU354 0.6 26.1 1.0
CE2 A:TRP255 0.6 53.1 1.0
CB B:THR316 0.7 60.3 1.0
CG B:PHE290 0.7 99.0 1.0
CZ B:TYR296 0.7 99.4 1.0
CA B:LEU298 0.7 69.5 1.0
CD A:GLU119 0.7 8.7 1.0
CD1 A:TRP255 0.8 53.1 1.0
CB B:PRO313 0.8 49.6 1.0
CD2 B:PHE290 0.8 99.0 1.0
OG1 B:THR316 0.8 60.3 1.0
N B:VAL388 0.9 60.0 1.0
O A:GLU119 0.9 44.1 1.0
O B:SER346 1.0 73.7 1.0
C B:ALA356 1.0 52.5 1.0
C A:ASP248 1.0 22.1 1.0
C A:GLU276 1.0 78.0 1.0
OE2 A:GLU119 1.0 8.7 1.0
C B:GLN357 1.0 67.7 1.0
CE1 B:TYR296 1.0 99.4 1.0
CA B:GLN299 1.0 46.5 1.0
CG B:TYR296 1.1 99.4 1.0
N B:ALA356 1.1 52.5 1.0
CZ B:PHE290 1.1 99.0 1.0
O A:GLU276 1.1 78.0 1.0
O B:LEU298 1.1 69.5 1.0
C B:VAL388 1.2 60.0 1.0
CE2 B:TYR296 1.2 99.4 1.0
CD2 B:LEU298 1.2 25.3 1.0
N B:LEU298 1.2 69.5 1.0
N B:GLN299 1.2 46.5 1.0
CB B:GLN299 1.2 0.0 1.0
CA B:THR389 1.2 0.0 1.0
O A:ASP248 1.2 22.1 1.0
CA B:GLN357 1.2 67.7 1.0
CG A:GLU119 1.2 8.7 1.0
O B:GLN357 1.2 67.7 1.0
O B:VAL388 1.3 60.0 1.0
CG2 B:THR316 1.4 60.3 1.0
N A:SER277 1.4 84.8 1.0
OE1 A:GLU119 1.4 8.7 1.0
CG B:PRO313 1.4 49.6 1.0
CB A:PRO123 1.4 59.7 1.0
CB B:LEU298 1.4 25.3 1.0
OH B:TYR296 1.4 99.4 1.0
CB A:ASP248 1.4 28.0 1.0
CH2 A:TRP255 1.4 53.1 1.0
OD1 A:ASP216 1.5 10.1 1.0
CB B:ALA356 1.5 52.5 1.0
C B:SER346 1.5 73.7 1.0
O B:GLU349 1.5 68.4 1.0
C B:GLY348 1.6 77.9 1.0
C B:VAL355 1.6 83.7 1.0
CA B:VAL388 1.6 60.0 1.0
N A:ASP248 1.6 22.1 1.0
CA A:SER277 1.7 84.8 1.0
O B:THR314 1.7 71.9 1.0
N B:THR389 1.7 0.0 1.0
CD1 B:TYR296 1.7 99.4 1.0
CG B:LEU354 1.7 26.1 1.0
CD1 B:PHE290 1.7 99.0 1.0
C A:GLU119 1.7 44.1 1.0
CA B:THR316 1.7 79.8 1.0
CA B:GLU349 1.7 68.4 1.0
N B:THR316 1.7 79.8 1.0
CG B:LEU298 1.7 25.3 1.0
CA B:PRO359 1.8 92.7 1.0
CG B:GLN299 1.8 0.0 1.0
OD2 A:ASP248 1.8 28.0 1.0
O5 B:NAG805 1.8 89.5 1.0
CB A:GLU276 1.9 78.3 1.0
CB B:TYR296 1.9 99.4 1.0
CD2 A:TRP255 1.9 53.1 1.0
C1 B:NAG805 1.9 89.5 1.0
CB A:GLU119 1.9 8.7 1.0
CG A:TRP255 1.9 53.1 1.0
C B:GLU349 2.0 68.4 1.0
OE1 A:GLU182 2.0 17.1 1.0
CB B:THR389 2.0 85.1 1.0
N B:GLY348 2.0 77.9 1.0
O A:GLY176 2.0 25.3 1.0
CB B:PRO359 2.0 92.7 1.0
O B:ASP289 2.0 0.0 1.0
C B:ILE387 2.0 60.1 1.0
N B:ASP358 2.0 99.7 1.0
CB B:GLN357 2.0 96.0 1.0
CA A:GLU276 2.1 78.0 1.0
CE1 B:PHE290 2.1 99.0 1.0
O B:ILE352 2.1 76.5 1.0
CA B:PHE290 2.1 52.9 1.0
CD B:PRO313 2.1 49.6 1.0
N B:PRO359 2.1 92.7 1.0
C B:VAL297 2.1 58.8 1.0
CB B:SER346 2.2 87.9 1.0
N A:MET249 2.2 41.8 1.0
O B:PHE331 2.2 76.3 1.0
O B:ALA356 2.2 52.5 1.0
O B:VAL355 2.2 83.7 1.0
CG A:ASP248 2.2 28.0 1.0
OD2 A:ASP216 2.2 10.1 1.0
CA B:PRO313 2.2 49.6 1.0
C B:LEU354 2.2 62.9 1.0
CA B:SER315 2.2 47.2 1.0
N B:GLU291 2.2 99.8 1.0
CA B:SER346 2.2 73.7 1.0
OG B:SER315 2.2 41.5 1.0
O A:ILE175 2.2 22.2 1.0
N B:GLY390 2.2 68.6 1.0
CA B:GLY348 2.2 77.9 1.0
CE2 B:PHE331 2.3 96.7 1.0
N B:ARG347 2.3 56.1 1.0
CA B:VAL355 2.3 83.7 1.0
CB B:LEU354 2.3 26.1 1.0
C8 B:NAG806 2.3 64.2 0.8
O A:ALA214 2.3 30.5 1.0
N B:LEU292 2.4 96.5 1.0
O B:LEU354 2.4 62.9 1.0
O B:GLY386 2.4 57.8 1.0
CG A:ASP216 2.4 10.1 1.0
N B:VAL355 2.4 83.7 1.0
C B:THR389 2.4 0.0 1.0
CA B:TYR296 2.4 86.8 1.0
CG A:PRO123 2.4 59.7 1.0
CG2 A:THR177 2.4 34.9 1.0
C B:THR314 2.5 71.9 1.0
OE2 B:GLU291 2.5 52.9 1.0
C B:ARG347 2.5 56.1 1.0
C A:LEU247 2.5 48.5 1.0
OD1 A:ASP213 2.5 47.1 1.0
CA A:GLU119 2.5 44.1 1.0
CB B:GLU349 2.5 99.7 1.0
CB B:VAL388 2.5 72.7 1.0
O A:LEU179 2.5 22.6 1.0
CA B:ILE387 2.5 60.1 1.0
C B:GLN299 2.5 46.5 1.0
N A:GLY120 2.6 54.5 1.0
C B:ASP358 2.6 99.7 1.0
O B:GLY348 2.6 77.9 1.0
CD B:PRO359 2.6 92.7 1.0
CA A:PRO123 2.6 59.7 1.0
CA B:ASP358 2.6 99.7 1.0
CA B:LEU354 2.6 62.9 1.0
O B:ALA317 2.6 65.8 1.0
CD A:GLU182 2.6 17.1 1.0
C B:THR316 2.6 79.8 1.0
CG2 B:THR389 2.6 85.1 1.0
N B:LEU354 2.6 62.9 1.0
CG2 B:VAL388 2.7 72.7 1.0
CZ3 A:TRP255 2.7 53.1 1.0
CB B:ARG293 2.7 0.0 1.0
C B:SER315 2.7 47.2 1.0
C B:PRO313 2.7 49.6 1.0
CD A:PRO123 2.7 59.7 1.0
CB A:SER277 2.7 97.7 1.0
O A:VAL121 2.7 44.7 1.0
CG A:GLU276 2.7 78.3 1.0
O B:VAL297 2.7 58.8 1.0
C B:TYR296 2.7 86.8 1.0
OE1 A:GLU276 2.7 78.3 1.0
CZ B:PHE331 2.8 96.7 1.0
C B:ASP289 2.8 0.0 1.0
C B:PHE290 2.8 52.9 1.0
OD2 A:ASP213 2.8 47.1 1.0
O A:LEU247 2.8 48.5 1.0
N B:ARG293 2.8 59.5 1.0
N B:VAL297 2.8 58.8 1.0
C A:GLY176 2.8 25.3 1.0
C B:GLY386 2.8 57.8 1.0
N B:PHE290 2.8 52.9 1.0
N B:SER315 2.9 47.2 1.0
N B:PRO313 2.9 49.6 1.0
CB B:SER315 2.9 41.5 1.0
CD2 B:LEU354 2.9 26.1 1.0
CA B:ARG347 2.9 56.1 1.0
CA A:GLY120 2.9 54.5 1.0
C A:SER277 2.9 84.8 1.0
N B:ALA317 2.9 65.8 1.0
N A:PRO123 2.9 59.7 1.0
CB B:GLU291 2.9 52.9 1.0
N B:ILE300 2.9 55.1 1.0
CD2 B:PHE331 2.9 96.7 1.0
CB B:LEU292 2.9 73.5 1.0
CA B:CA911 2.9 37.4 1.0
CE3 A:TRP255 2.9 53.1 1.0
O B:GLY390 3.0 68.6 1.0
OE2 A:GLU182 3.0 17.1 1.0
N B:LYS350 3.0 96.1 1.0
CG A:ASP213 3.0 47.1 1.0
O B:ARG347 3.0 56.1 1.0
O B:ARG293 3.0 59.5 1.0
O B:ILE387 3.0 60.1 1.0
CA A:THR177 3.0 44.7 1.0
N A:ALA214 3.0 30.5 1.0
CD1 B:LEU298 3.0 25.3 1.0
C B:PRO359 3.0 92.7 1.0
CB A:TRP255 3.1 53.1 1.0
OD2 B:ASP289 3.1 99.7 1.0
O B:PRO313 3.1 49.6 1.0
C5 B:NAG805 3.1 89.5 1.0
O B:GLN295 3.1 91.9 1.0
CG B:GLU349 3.1 99.7 1.0
CD B:GLN299 3.1 0.0 1.0
OG B:SER346 3.1 87.9 1.0
N B:ILE387 3.1 60.1 1.0
CA B:VAL297 3.1 58.8 1.0
CG B:PRO359 3.2 92.7 1.0
C B:GLU291 3.2 99.8 1.0
N B:THR314 3.2 71.9 1.0
CA B:GLU291 3.2 99.8 1.0
O B:THR316 3.2 79.8 1.0
N A:ASN278 3.2 54.3 1.0
CB A:ALA214 3.2 30.5 1.0
CA B:LEU292 3.2 96.5 1.0
CG B:LEU292 3.2 73.5 1.0
C B:ALA317 3.2 65.8 1.0
C B:ILE352 3.2 76.5 1.0
CB A:THR177 3.2 34.9 1.0
O B:ASP358 3.2 99.7 1.0
OG A:SER277 3.2 97.7 1.0
OG1 B:THR389 3.3 85.1 1.0
N A:GLU276 3.3 78.0 1.0
CA A:CA909 3.3 12.9 1.0
CA B:ARG293 3.3 59.5 1.0
C A:ALA214 3.3 30.5 1.0
C B:PHE331 3.3 76.3 1.0
O B:TYR296 3.3 86.8 1.0
CD2 A:LEU174 3.3 39.9 1.0
NE2 B:GLN299 3.3 0.0 1.0
CA A:MET249 3.3 41.8 1.0
CB A:LEU179 3.3 33.9 1.0
CA B:LYS350 3.3 96.1 1.0
N B:ILE351 3.3 42.0 1.0
C A:ILE175 3.3 22.2 1.0
CG B:ARG293 3.3 0.0 1.0
CD B:GLU291 3.4 52.9 1.0
N A:PRO250 3.4 34.0 1.0
CD A:GLU276 3.4 78.3 1.0
CG B:GLN357 3.4 96.0 1.0
N2 B:NAG806 3.4 64.2 0.8
C2 B:NAG805 3.4 89.5 1.0
CE2 B:TYR369 3.4 55.3 1.0
O B:THR389 3.4 0.0 1.0
OD1 A:ASP248 3.4 28.0 1.0
N A:THR177 3.4 44.7 1.0
C B:ARG293 3.4 59.5 1.0
C A:LEU179 3.5 22.6 1.0
N B:PHE331 3.5 76.3 1.0
CA A:ALA214 3.5 30.5 1.0
O B:GLN299 3.5 46.5 1.0
CG2 B:ILE387 3.5 73.5 1.0
CA B:GLY390 3.5 68.6 1.0
O B:PRO359 3.5 92.7 1.0
C7 B:NAG806 3.5 64.2 0.8
CG B:ASP289 3.5 99.7 1.0
CA A:PRO250 3.5 34.0 1.0
CE1 B:PHE331 3.5 96.7 1.0
C A:MET249 3.6 41.8 1.0
N B:TYR296 3.6 86.8 1.0
O6 B:NAG805 3.6 89.5 1.0
CA B:PHE332 3.6 0.0 1.0
CG A:GLU182 3.6 17.1 1.0
C B:LEU292 3.6 96.5 1.0
CG B:PHE331 3.6 96.7 1.0
CA B:THR318 3.6 63.9 1.0
C A:GLY120 3.6 54.5 1.0
N B:SER346 3.6 73.7 1.0
O B:VAL319 3.6 48.1 1.0
CA B:GLY386 3.6 57.8 1.0
N A:LEU179 3.6 22.6 1.0
CA B:THR314 3.6 71.9 1.0
C B:GLY390 3.7 68.6 1.0
O A:ASP246 3.7 85.4 1.0
CD A:PRO250 3.7 34.0 1.0
CB B:VAL355 3.7 82.9 1.0
CG B:GLU291 3.7 52.9 1.0
CA A:LEU247 3.7 48.5 1.0
CB B:ILE387 3.7 73.5 1.0
NH2 A:ARG181 3.7 47.9 1.0
ND2 A:ASN278 3.7 62.2 1.0
CD1 B:PHE331 3.7 96.7 1.0
C B:GLN295 3.7 91.9 1.0
CA A:GLY176 3.7 25.3 1.0
C B:SER353 3.7 79.6 1.0
N B:THR318 3.7 63.9 1.0
CA B:SER353 3.8 79.6 1.0
CA A:LEU179 3.8 22.6 1.0
CB A:ASP216 3.8 10.1 1.0
C B:LYS350 3.8 96.1 1.0
OD1 B:ASP289 3.8 99.7 1.0
CG1 B:VAL388 3.8 72.7 1.0
OD1 A:ASP246 3.8 13.3 1.0
N A:GLU119 3.8 44.1 1.0
C A:PRO123 3.8 59.7 1.0
CG A:PRO250 3.8 34.0 1.0
O B:SER315 3.8 47.2 1.0
N A:GLY178 3.8 67.1 1.0
N A:VAL121 3.9 44.7 1.0
C6 B:NAG805 3.9 89.5 1.0
NE A:ARG181 3.9 47.9 1.0
CA B:ALA317 3.9 65.8 1.0
CG A:LEU179 3.9 33.9 1.0
CD1 B:LEU292 3.9 73.5 1.0
C A:GLN122 3.9 41.9 1.0
O B:PHE290 3.9 52.9 1.0
N B:SER353 3.9 79.6 1.0
O A:SER277 3.9 84.8 1.0
N A:GLY176 3.9 25.3 1.0
N B:ASP360 3.9 65.5 1.0
C A:VAL121 3.9 44.7 1.0
OD1 A:ASP180 4.0 24.0 1.0
N B:ILE352 4.0 76.5 1.0
ND2 A:ASN217 4.0 53.4 1.0
O B:ILE300 4.0 55.1 1.0
CA B:ASP289 4.0 0.0 1.0
N A:LEU247 4.0 48.5 1.0
N B:PHE332 4.0 0.0 1.0
C B:LEU312 4.0 45.9 1.0
CG2 B:THR318 4.0 70.0 1.0
CA A:TRP255 4.0 50.6 1.0
CA B:PHE331 4.0 76.3 1.0
N B:VAL319 4.0 48.1 1.0
N A:ASP216 4.0 48.2 1.0
CB B:ARG347 4.1 99.5 1.0
C A:ASP246 4.1 85.4 1.0
OE1 B:GLN299 4.1 0.0 1.0
CD2 B:TYR369 4.1 55.3 1.0
CB B:ASP358 4.1 96.2 1.0
O A:ALA254 4.1 24.4 1.0
N A:ARG181 4.1 27.8 1.0
CD1 A:LEU179 4.1 33.9 1.0
CG A:LEU174 4.1 39.9 1.0
N2 B:NAG805 4.1 89.5 1.0
CB B:ASP289 4.1 99.7 1.0
C A:ASP213 4.1 43.1 1.0
C A:THR177 4.2 44.7 1.0
CD1 B:PHE332 4.2 99.8 1.0
C B:PHE332 4.2 0.0 1.0
O A:GLY120 4.2 54.5 1.0
CB A:PRO250 4.2 34.0 1.0
CA A:ASP180 4.2 28.1 1.0
NZ B:LYS224 4.2 100.0 1.0
C4 B:NAG805 4.2 89.5 1.0
O A:MET249 4.2 41.8 1.0
CA B:ILE352 4.2 76.5 1.0
O B:GLU291 4.2 99.8 1.0
OH B:TYR369 4.2 55.3 1.0
O B:THR380 4.2 80.3 1.0
C3 B:NAG805 4.3 89.5 1.0
N B:VAL333 4.3 82.6 1.0
CA B:ILE300 4.3 55.1 1.0
NH1 A:ARG241 4.3 47.5 1.0
CB A:ARG181 4.3 47.9 1.0
N B:ASP289 4.3 0.0 1.0
CZ B:TYR369 4.3 55.3 1.0
CG1 B:ILE352 4.3 72.5 1.0
C B:ILE300 4.3 55.1 1.0
O A:TRP255 4.3 50.6 1.0
CB B:THR318 4.3 70.0 1.0
O A:PRO250 4.3 34.0 1.0
CA A:ILE175 4.3 22.2 1.0
C A:PRO275 4.3 57.9 1.0
CZ A:ARG181 4.3 47.9 1.0
CG2 B:THR301 4.3 71.7 1.0
CG1 B:ILE351 4.3 27.4 1.0
CA A:GLN122 4.4 41.9 1.0
CG2 B:VAL323 4.4 37.3 1.0
CB B:ILE351 4.4 27.4 1.0
CA B:PRO330 4.4 43.9 1.0
CA B:ILE351 4.4 42.0 1.0
CB A:ASP213 4.4 47.1 1.0
C B:PRO330 4.4 43.9 1.0
N A:ASP180 4.4 28.1 1.0
CD2 B:LEU292 4.4 73.5 1.0
CA A:ASP213 4.4 43.1 1.0
CD B:GLU349 4.4 99.7 1.0
OG1 B:THR318 4.4 70.0 1.0
O A:PRO123 4.4 59.7 1.0
OE1 B:GLU291 4.4 52.9 1.0
CD B:GLN357 4.5 96.0 1.0
CB A:ASP246 4.5 13.3 1.0
CB B:PHE332 4.5 99.8 1.0
N A:ASN215 4.5 34.3 1.0
CD1 B:ILE300 4.5 30.9 1.0
C A:PRO250 4.5 34.0 1.0
N A:GLY124 4.5 65.0 1.0
N B:LYS294 4.5 0.0 1.0
CG A:ASN278 4.5 62.2 1.0
CB B:PHE331 4.5 96.7 1.0
CE2 B:PHE269 4.5 54.5 1.0
OE1 B:GLU349 4.5 99.7 1.0
C B:THR318 4.5 63.9 1.0
CG2 B:VAL355 4.5 82.9 1.0
CB B:VAL297 4.5 77.0 1.0
OG1 A:THR177 4.5 34.9 1.0
CB B:THR314 4.6 29.6 1.0
O7 B:NAG806 4.6 64.2 0.8
ND2 B:ASN391 4.6 0.0 1.0
CB A:MET249 4.6 52.2 1.0
O A:ARG118 4.6 36.5 1.0
CA A:ASP216 4.6 48.2 1.0
CB B:PRO330 4.6 43.9 1.0
C B:LEU345 4.6 52.2 1.0
CG A:ASP246 4.6 13.3 1.0
CA B:LEU312 4.6 45.9 1.0
CA A:ASN278 4.6 54.3 1.0
CG1 B:VAL355 4.6 82.9 1.0
O A:PRO275 4.6 57.9 1.0
OE1 B:GLN357 4.6 96.0 1.0
C2 B:NAG806 4.6 64.2 0.8
CB B:LYS350 4.6 100.0 1.0
OE2 A:GLU276 4.6 78.3 1.0
CA A:VAL121 4.7 44.7 1.0
CG1 B:VAL297 4.7 77.0 1.0
CB B:ILE352 4.7 72.5 1.0
C A:GLY178 4.7 67.1 1.0
O A:GLN122 4.7 41.9 1.0
C B:VAL319 4.7 48.1 1.0
OD1 A:ASP274 4.7 0.0 1.0
O B:LEU312 4.7 45.9 1.0
CD A:ARG181 4.7 47.9 1.0
N B:ASN391 4.7 85.3 1.0
NE2 A:GLN279 4.7 47.4 1.0
O B:LEU292 4.8 96.5 1.0
C A:ARG118 4.8 36.5 1.0
CD B:ARG293 4.8 0.0 1.0
C A:TRP255 4.8 50.6 1.0
N A:GLN122 4.8 41.9 1.0
CD1 A:LEU174 4.8 39.9 1.0
CE B:LYS224 4.8 100.0 1.0
OE2 B:GLU328 4.8 0.0 1.0
O B:LEU345 4.8 52.2 1.0
C A:ALA254 4.8 24.4 1.0
C3 B:NAG806 4.8 64.2 0.8
C A:ASP180 4.8 28.1 1.0
CD2 B:LEU345 4.8 0.0 1.0
CZ B:PHE269 4.8 54.5 1.0
CG B:ARG262 4.8 61.2 1.0
C B:ILE351 4.8 42.0 1.0
CG1 B:ILE387 4.8 73.5 1.0
OE2 B:GLU232 4.8 49.7 1.0
O B:SER353 4.8 79.6 1.0
CA A:GLY178 4.9 67.1 1.0
CG B:PHE332 4.9 99.8 1.0
N A:GLU182 4.9 40.6 1.0
CA B:VAL319 4.9 48.1 1.0
CZ B:ARG293 4.9 0.0 1.0
CB A:LEU247 4.9 11.6 1.0
O B:LYS350 4.9 96.1 1.0
O B:PHE332 4.9 0.0 1.0
N A:TRP255 4.9 50.6 1.0
CG1 A:ILE175 4.9 20.3 1.0
O A:LEU174 4.9 17.0 1.0
O7 B:NAG805 4.9 89.5 1.0
CA A:ASN215 4.9 34.3 1.0
CA A:ARG181 4.9 27.8 1.0
CA A:ASP246 4.9 85.4 1.0
N B:THR301 4.9 27.7 1.0
NH1 B:ARG293 4.9 0.0 1.0
CD B:GLU232 4.9 49.7 1.0
NE B:ARG293 4.9 0.0 1.0
CG B:ASP358 4.9 96.2 1.0
CG2 B:VAL321 4.9 44.5 1.0
O3 B:NAG806 5.0 64.2 0.8
CG B:LYS350 5.0 100.0 1.0
CB A:ASN278 5.0 62.2 1.0
O B:ASN385 5.0 70.8 1.0
C7 B:NAG805 5.0 89.5 1.0
O A:ASP274 5.0 85.4 1.0
N B:GLY386 5.0 57.8 1.0
CG A:ASP180 5.0 24.0 1.0
CD2 B:LEU312 5.0 28.0 1.0
CG2 A:VAL121 5.0 45.8 1.0
CG2 B:VAL333 5.0 68.3 1.0

Calcium binding site 5 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 5 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca909

b:12.9
occ:1.00
 OG A:SER277 0.1 97.7 1.0
CA B:LYS350 0.2 96.1 1.0
CG B:ARG293 0.3 0.0 1.0
CD B:GLN299 0.4 0.0 1.0
OE2 A:GLU182 0.4 17.1 1.0
CB A:THR177 0.4 34.9 1.0
CA A:LEU247 0.5 48.5 1.0
CA B:SER353 0.5 79.6 1.0
CG B:GLU349 0.6 99.7 1.0
O B:VAL297 0.7 58.8 1.0
CA B:LEU292 0.8 96.5 1.0
N B:LEU354 0.8 62.9 1.0
CG B:GLN357 0.8 96.0 1.0
N B:LYS350 0.8 96.1 1.0
C5 B:NAG805 0.9 89.5 1.0
C A:LEU247 0.9 48.5 1.0
CB B:LEU292 0.9 73.5 1.0
C B:SER353 0.9 79.6 1.0
C4 B:NAG805 1.0 89.5 1.0
NE2 B:GLN299 1.1 0.0 1.0
CB A:SER277 1.1 97.7 1.0
O A:ASP246 1.1 85.4 1.0
C B:LEU354 1.2 62.9 1.0
CA B:VAL355 1.2 83.7 1.0
N B:VAL355 1.3 83.7 1.0
CB B:VAL355 1.3 82.9 1.0
CB B:GLN357 1.3 96.0 1.0
CD B:GLU349 1.3 99.7 1.0
CA A:THR177 1.3 44.7 1.0
CA B:LEU354 1.3 62.9 1.0
CB B:GLU349 1.3 99.7 1.0
C B:GLU349 1.4 68.4 1.0
CG2 A:THR177 1.4 34.9 1.0
OG B:SER346 1.4 87.9 1.0
C B:LEU292 1.4 96.5 1.0
N B:SER353 1.4 79.6 1.0
O5 B:NAG805 1.5 89.5 1.0
CD A:GLU182 1.5 17.1 1.0
CG2 B:VAL355 1.5 82.9 1.0
CB B:ARG293 1.5 0.0 1.0
N A:GLY178 1.5 67.1 1.0
OG1 A:THR177 1.5 34.9 1.0
CG B:GLN299 1.5 0.0 1.0
CB B:LYS350 1.6 100.0 1.0
CB A:LEU247 1.6 11.6 1.0
CD2 B:LEU292 1.6 73.5 1.0
OE1 B:GLN299 1.7 0.0 1.0
CA B:GLU349 1.7 68.4 1.0
CD B:GLN357 1.7 96.0 1.0
CD B:ARG293 1.7 0.0 1.0
N A:LEU247 1.7 48.5 1.0
C B:LYS350 1.7 96.1 1.0
NE B:ARG293 1.7 0.0 1.0
C A:THR177 1.7 44.7 1.0
CG B:LEU292 1.8 73.5 1.0
C B:VAL355 1.8 83.7 1.0
O B:LEU354 1.8 62.9 1.0
ND2 A:ASN217 1.8 53.4 1.0
O A:LEU247 1.8 48.5 1.0
NH2 B:ARG293 1.9 0.0 1.0
N A:ASP248 1.9 22.1 1.0
O B:SER353 1.9 79.6 1.0
C3 B:NAG805 1.9 89.5 1.0
C B:VAL297 1.9 58.8 1.0
N B:ARG293 1.9 59.5 1.0
CB B:SER346 1.9 87.9 1.0
CZ B:ARG293 2.0 0.0 1.0
N B:LEU292 2.0 96.5 1.0
C6 B:NAG805 2.0 89.5 1.0
C A:ASP246 2.0 85.4 1.0
CG A:GLU182 2.0 17.1 1.0
OE1 B:GLU349 2.0 99.7 1.0
C B:ILE352 2.1 76.5 1.0
CB B:SER353 2.1 59.3 1.0
N A:THR177 2.1 44.7 1.0
O A:LEU179 2.1 22.6 1.0
OD1 A:ASP180 2.2 24.0 1.0
O B:LEU292 2.2 96.5 1.0
CA A:GLY178 2.2 67.1 1.0
O B:VAL355 2.2 83.7 1.0
O4 B:NAG805 2.3 89.5 1.0
OE2 B:GLU349 2.3 99.7 1.0
C2 B:NAG805 2.3 89.5 1.0
N B:ILE351 2.3 42.0 1.0
C1 B:NAG805 2.3 89.5 1.0
NE2 B:GLN357 2.3 96.0 1.0
O6 B:NAG805 2.3 89.5 1.0
OE1 A:GLU182 2.4 17.1 1.0
O B:ILE352 2.4 76.5 1.0
NH1 B:ARG293 2.4 0.0 1.0
OD2 A:ASP216 2.4 10.1 1.0
CG B:LYS350 2.4 100.0 1.0
CG1 B:VAL355 2.4 82.9 1.0
CA B:ARG293 2.4 59.5 1.0
N B:ALA356 2.5 52.5 1.0
O B:GLU349 2.5 68.4 1.0
CA A:SER277 2.5 84.8 1.0
O A:THR177 2.5 44.7 1.0
OE1 A:GLU119 2.5 8.7 1.0
OE1 B:GLN357 2.6 96.0 1.0
CG A:ASN217 2.6 53.4 1.0
CG A:ASP216 2.6 10.1 1.0
CB B:GLN299 2.6 0.0 1.0
CA B:GLN357 2.6 67.7 1.0
N A:LEU179 2.7 22.6 1.0
C A:GLY178 2.7 67.1 1.0
C B:GLU291 2.7 99.8 1.0
O B:LYS350 2.7 96.1 1.0
N B:LEU298 2.7 69.5 1.0
O B:GLU291 2.7 99.8 1.0
OG B:SER353 2.7 59.3 1.0
C B:ALA356 2.7 52.5 1.0
CG A:ASP180 2.8 24.0 1.0
O B:GLN295 2.8 91.9 1.0
N B:VAL297 2.8 58.8 1.0
CB A:ASP216 2.8 10.1 1.0
N B:GLN357 2.8 67.7 1.0
CB B:LEU354 2.8 26.1 1.0
O B:ALA356 2.8 52.5 1.0
OD2 A:ASP248 2.9 28.0 1.0
C A:GLY176 2.9 25.3 1.0
OD1 A:ASP216 2.9 10.1 1.0
OG1 B:THR316 2.9 60.3 1.0
NE1 A:TRP255 2.9 53.1 1.0
CA B:LEU298 2.9 69.5 1.0
N B:GLU349 2.9 68.4 1.0
OD1 A:ASN217 3.0 53.4 1.0
CA A:ASP248 3.0 22.1 1.0
CA B:VAL297 3.0 58.8 1.0
CG1 B:VAL297 3.0 77.0 1.0
CB A:GLU182 3.0 17.1 1.0
CD1 B:LEU292 3.1 73.5 1.0
O3 B:NAG805 3.1 89.5 1.0
CG A:LEU247 3.1 11.6 1.0
C A:LEU179 3.1 22.6 1.0
CA B:ALA356 3.1 52.5 1.0
O3 B:NAG806 3.1 64.2 0.8
CB A:ASP180 3.1 24.0 1.0
CB B:VAL297 3.1 77.0 1.0
O A:GLY176 3.2 25.3 1.0
O B:VAL388 3.2 60.0 1.0
N A:ASP246 3.3 85.4 1.0
CE2 B:TYR296 3.3 99.4 1.0
CA A:CA908 3.3 10.5 1.0
NE2 A:GLN279 3.3 47.4 1.0
CA A:ASP246 3.3 85.4 1.0
CD2 B:TYR296 3.3 99.4 1.0
N B:ILE352 3.3 76.5 1.0
CA B:ILE352 3.3 76.5 1.0
C B:LEU298 3.3 69.5 1.0
N B:GLN299 3.3 46.5 1.0
CB B:PRO313 3.3 49.6 1.0
OD2 A:ASP180 3.3 24.0 1.0
CE2 B:PHE290 3.4 99.0 1.0
CD2 B:PHE290 3.4 99.0 1.0
N A:SER277 3.4 84.8 1.0
CA A:ASP180 3.4 28.1 1.0
O B:SER346 3.4 73.7 1.0
CA B:SER346 3.4 73.7 1.0
O A:ASP248 3.5 22.1 1.0
OH B:TYR296 3.5 99.4 1.0
C A:SER277 3.5 84.8 1.0
CZ B:TYR296 3.5 99.4 1.0
CB A:ASN217 3.5 53.4 1.0
CD1 A:TRP255 3.5 53.1 1.0
CA B:TYR296 3.5 86.8 1.0
O B:GLY386 3.5 57.8 1.0
CZ2 A:TRP255 3.5 53.1 1.0
CD1 A:LEU247 3.5 11.6 1.0
O B:GLY348 3.6 77.9 1.0
CZ B:PHE331 3.6 96.7 1.0
CA A:GLY176 3.6 25.3 1.0
CA A:LEU179 3.6 22.6 1.0
N2 B:NAG805 3.6 89.5 1.0
O A:GLY178 3.6 67.1 1.0
CB B:THR316 3.6 60.3 1.0
CD A:GLU119 3.6 8.7 1.0
CG A:ASP248 3.6 28.0 1.0
O B:THR314 3.7 71.9 1.0
O A:VAL244 3.7 0.0 1.0
CG2 B:THR316 3.7 60.3 1.0
O A:SER277 3.7 84.8 1.0
CB B:GLU291 3.7 52.9 1.0
CG B:PHE290 3.7 99.0 1.0
CG2 B:ILE387 3.7 73.5 1.0
CG B:LEU354 3.7 26.1 1.0
C B:GLY348 3.7 77.9 1.0
CA B:ILE351 3.7 42.0 1.0
C B:ILE351 3.7 42.0 1.0
C B:GLN357 3.7 67.7 1.0
C8 B:NAG806 3.7 64.2 0.8
OD1 A:ASP246 3.7 13.3 1.0
C3 B:NAG806 3.8 64.2 0.8
CG2 B:VAL333 3.8 68.3 1.0
CE2 A:TRP255 3.8 53.1 1.0
CA B:GLN299 3.8 46.5 1.0
CA A:THR245 3.8 71.2 1.0
CB B:PHE290 3.8 99.0 1.0
CD B:LYS350 3.8 100.0 1.0
N A:ASP180 3.8 28.1 1.0
C B:GLN295 3.8 91.9 1.0
C B:TYR296 3.8 86.8 1.0
C A:THR245 3.8 71.2 1.0
CD1 B:LEU354 3.8 26.1 1.0
O A:ILE175 3.8 22.2 1.0
C B:ARG293 3.8 59.5 1.0
CG2 A:THR245 3.9 93.2 1.0
C A:ASP248 3.9 22.1 1.0
CZ B:PHE290 3.9 99.0 1.0
CB B:LEU298 3.9 25.3 1.0
N2 B:NAG806 3.9 64.2 0.8
C B:SER346 3.9 73.7 1.0
CA B:GLU291 4.0 99.8 1.0
N B:SER346 4.0 73.7 1.0
CG B:TYR296 4.0 99.4 1.0
CB A:ASP246 4.0 13.3 1.0
OE2 A:GLU119 4.0 8.7 1.0
N B:VAL388 4.0 60.0 1.0
CD2 B:LEU345 4.0 0.0 1.0
CG2 B:THR318 4.0 70.0 1.0
CB A:ASP248 4.0 28.0 1.0
C7 B:NAG806 4.0 64.2 0.8
CD A:GLN279 4.0 47.4 1.0
O B:LEU298 4.0 69.5 1.0
CB A:THR245 4.0 93.2 1.0
N B:ASP358 4.1 99.7 1.0
CE1 B:TYR296 4.1 99.4 1.0
CE1 B:PHE331 4.1 96.7 1.0
N B:GLU291 4.1 99.8 1.0
CA B:PRO313 4.1 49.6 1.0
OE1 A:GLU276 4.1 78.3 1.0
CD2 A:LEU247 4.1 11.6 1.0
C A:GLU276 4.2 78.0 1.0
O B:PRO359 4.2 92.7 1.0
O A:GLU119 4.2 44.1 1.0
C B:VAL388 4.2 60.0 1.0
O A:GLU276 4.2 78.0 1.0
CG A:GLN279 4.2 47.4 1.0
CE2 B:PHE331 4.2 96.7 1.0
N A:GLU182 4.2 40.6 1.0
CA B:PRO359 4.2 92.7 1.0
N B:TYR296 4.2 86.8 1.0
O B:ASP358 4.3 99.7 1.0
CA B:ILE387 4.3 60.1 1.0
N A:ASN217 4.3 65.3 1.0
CD2 B:LEU298 4.3 25.3 1.0
CG1 B:VAL333 4.3 68.3 1.0
CA A:ASP216 4.3 48.2 1.0
CB A:LEU179 4.3 33.9 1.0
CD1 B:PHE290 4.3 99.0 1.0
O B:ARG293 4.4 59.5 1.0
O B:ILE351 4.4 42.0 1.0
NH1 B:ARG338 4.4 100.0 1.0
CA A:GLU182 4.4 40.6 1.0
CG A:GLU276 4.4 78.3 1.0
CB B:TYR296 4.4 99.4 1.0
O A:THR245 4.4 71.2 1.0
CG A:GLU119 4.4 8.7 1.0
C2 B:NAG806 4.5 64.2 0.8
OD1 A:ASP248 4.5 28.0 1.0
CD1 B:TYR296 4.5 99.4 1.0
CA B:THR389 4.5 0.0 1.0
N A:ARG181 4.5 27.8 1.0
OE2 B:GLU265 4.5 85.5 1.0
C B:ASP358 4.5 99.7 1.0
O B:GLN357 4.5 67.7 1.0
CG A:ASP246 4.5 13.3 1.0
C A:ASP180 4.5 28.1 1.0
CB B:ILE352 4.5 72.5 1.0
CE1 B:PHE290 4.5 99.0 1.0
CH2 A:TRP255 4.6 53.1 1.0
N B:LYS294 4.6 0.0 1.0
CB A:PRO123 4.6 59.7 1.0
ND2 A:ASN278 4.6 62.2 1.0
CB A:GLU276 4.6 78.3 1.0
NH1 A:ARG241 4.6 47.5 1.0
CB A:GLU119 4.6 8.7 1.0
CB B:ALA356 4.6 52.5 1.0
CG B:PRO313 4.6 49.6 1.0
NE B:ARG262 4.6 61.2 1.0
O7 B:NAG805 4.6 89.5 1.0
O B:PHE331 4.6 76.3 1.0
N B:PRO359 4.6 92.7 1.0
C B:ILE387 4.6 60.1 1.0
CA A:ASN217 4.7 65.3 1.0
C B:PRO359 4.7 92.7 1.0
C7 B:NAG805 4.7 89.5 1.0
C A:ASP216 4.7 48.2 1.0
N A:GLY176 4.7 25.3 1.0
N A:ASN278 4.7 54.3 1.0
N A:ASP216 4.7 48.2 1.0
C8 A:NAG802 4.7 99.3 0.8
CB B:ILE387 4.7 73.5 1.0
CD B:GLU265 4.7 85.5 1.0
O7 B:NAG806 4.7 64.2 0.8
CG2 B:VAL297 4.7 77.0 1.0
CD A:GLU276 4.7 78.3 1.0
C A:ILE175 4.7 22.2 1.0
CG2 B:THR389 4.7 85.1 1.0
C A:VAL244 4.8 0.0 1.0
C B:GLY386 4.8 57.8 1.0
CG A:PRO123 4.8 59.7 1.0
CB B:ILE351 4.8 27.4 1.0
CG A:TRP255 4.8 53.1 1.0
NH2 A:ARG181 4.8 47.9 1.0
O4 B:NAG806 4.8 64.2 0.8
N B:VAL333 4.8 82.6 1.0
OE1 A:GLN279 4.8 47.4 1.0
O A:ALA214 4.8 30.5 1.0
CG B:GLU265 4.8 85.5 1.0
CA B:VAL388 4.8 60.0 1.0
CB B:VAL333 4.8 68.3 1.0
N B:PRO313 4.8 49.6 1.0
N B:THR314 4.8 71.9 1.0
CG B:ARG262 4.8 61.2 1.0
CB B:THR389 4.8 85.1 1.0
O B:TYR296 4.8 86.8 1.0
N B:THR389 4.9 0.0 1.0
N B:THR316 4.9 79.8 1.0
C B:THR314 4.9 71.9 1.0
N A:THR245 4.9 71.2 1.0
CD B:PRO313 4.9 49.6 1.0
CG B:LEU298 4.9 25.3 1.0
CE B:LYS350 4.9 100.0 1.0
CD2 A:TRP255 4.9 53.1 1.0
C B:PRO313 4.9 49.6 1.0
CD B:ARG262 5.0 61.2 1.0
C A:GLU119 5.0 44.1 1.0
C B:GLN299 5.0 46.5 1.0
CG B:GLU291 5.0 52.9 1.0
CA B:THR316 5.0 79.8 1.0

Calcium binding site 6 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 6 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca910

b:10.5
occ:1.00
 C B:LYS294 0.2 0.0 1.0
O B:ASN385 0.4 70.8 1.0
C A:ASN278 0.4 54.3 1.0
CZ A:ARG241 0.4 47.5 1.0
CA B:LYS294 0.5 0.0 1.0
C A:ASN215 0.5 34.3 1.0
C1 B:NAG806 0.6 64.2 0.8
CG1 B:ILE387 0.7 73.5 1.0
OE2 A:GLU276 0.7 78.3 1.0
N A:GLN279 0.7 65.4 1.0
CB B:THR318 0.8 70.0 1.0
OG1 B:THR318 0.9 70.0 1.0
C B:ASN385 0.9 70.8 1.0
OD2 A:ASP246 1.0 13.3 1.0
O B:LYS294 1.0 0.0 1.0
CG A:ASN278 1.0 62.2 1.0
N B:LYS361 1.1 71.2 1.0
NH2 A:ARG241 1.1 47.5 1.0
C B:ASP360 1.1 65.5 1.0
OD1 A:ASN278 1.1 62.2 1.0
O A:ASN215 1.1 34.3 1.0
CA A:ASN278 1.2 54.3 1.0
N A:ASP216 1.2 48.2 1.0
NH1 A:ARG241 1.3 47.5 1.0
OH B:TYR369 1.3 55.3 1.0
O A:ASN278 1.3 54.3 1.0
N B:GLN295 1.3 91.9 1.0
CD1 B:ILE387 1.4 73.5 1.0
CA B:GLN295 1.4 91.9 1.0
O7 B:NAG806 1.4 64.2 0.8
CB B:ILE387 1.4 73.5 1.0
ND2 A:ASN278 1.5 62.2 1.0
CG B:GLU291 1.5 52.9 1.0
N B:LYS294 1.5 0.0 1.0
O5 B:NAG806 1.6 64.2 0.8
CB B:LYS294 1.6 100.0 1.0
CG A:ASP246 1.6 13.3 1.0
CA B:ASP360 1.7 65.5 1.0
N B:TYR296 1.7 86.8 1.0
C2 B:NAG806 1.7 64.2 0.8
CA A:ASN215 1.7 34.3 1.0
NE A:ARG241 1.7 47.5 1.0
CB A:ASN278 1.8 62.2 1.0
OD1 A:ASP248 1.8 28.0 1.0
CD A:GLU276 1.8 78.3 1.0
O B:PRO359 1.8 92.7 1.0
OG1 B:THR320 1.8 82.8 1.0
O B:ASP360 1.8 65.5 1.0
C7 B:NAG806 1.9 64.2 0.8
CG2 B:THR318 1.9 70.0 1.0
O B:ASP358 2.0 99.7 1.0
OD1 A:ASN215 2.0 28.6 1.0
N B:GLY386 2.0 57.8 1.0
O B:TYR296 2.0 86.8 1.0
CA A:ASP216 2.0 48.2 1.0
O A:ASN217 2.0 65.3 1.0
N A:ASN278 2.0 54.3 1.0
CA B:ASN385 2.1 70.8 1.0
C B:GLN295 2.1 91.9 1.0
CA A:GLN279 2.1 65.4 1.0
O A:ALA254 2.1 24.4 1.0
CE B:LYS224 2.1 100.0 1.0
O B:ARG293 2.1 59.5 1.0
CA B:THR318 2.1 63.9 1.0
N2 B:NAG806 2.1 64.2 0.8
C B:ARG293 2.1 59.5 1.0
O B:VAL321 2.2 0.0 1.0
OD1 A:ASN304 2.2 57.1 1.0
OD1 A:ASP246 2.2 13.3 1.0
CA B:GLU291 2.2 99.8 1.0
O A:TRP255 2.2 50.6 1.0
CG2 B:ILE387 2.2 73.5 1.0
C B:PRO359 2.2 92.7 1.0
N B:ASP360 2.3 65.5 1.0
CB A:ASP246 2.3 13.3 1.0
C B:THR318 2.3 63.9 1.0
CB A:GLN279 2.4 47.4 1.0
CB B:GLU291 2.4 52.9 1.0
CZ B:TYR369 2.4 55.3 1.0
OE1 A:GLU276 2.4 78.3 1.0
CA B:LYS361 2.4 71.2 1.0
O A:SER277 2.4 84.8 1.0
CA B:THR320 2.5 81.8 1.0
C B:TYR296 2.5 86.8 1.0
ND2 A:ASN304 2.5 57.1 1.0
N B:ILE387 2.5 60.1 1.0
C A:SER277 2.5 84.8 1.0
C B:GLY386 2.5 57.8 1.0
N A:ASN217 2.5 65.3 1.0
C5 B:NAG806 2.6 64.2 0.8
O B:PHE290 2.6 52.9 1.0
CG B:LYS294 2.6 100.0 1.0
CB B:ASN385 2.6 0.0 1.0
CB B:GLN295 2.6 77.0 1.0
CG A:GLU276 2.6 78.3 1.0
O B:VAL319 2.6 48.1 1.0
C B:VAL319 2.6 48.1 1.0
CB B:THR320 2.6 82.8 1.0
ND2 B:ASN385 2.6 0.0 1.0
CB A:ASN215 2.6 28.6 1.0
O B:THR318 2.6 63.9 1.0
CG A:ASN215 2.6 28.6 1.0
CA B:GLY386 2.6 57.8 1.0
CA B:ILE387 2.6 60.1 1.0
O5 B:NAG807 2.6 62.6 0.5
O B:GLY348 2.7 77.9 1.0
CE1 B:TYR369 2.7 55.3 1.0
CG B:GLN363 2.7 0.0 1.0
O A:GLN279 2.7 65.4 1.0
C A:ASP216 2.7 48.2 1.0
CD B:GLU291 2.7 52.9 1.0
N A:ASN215 2.7 34.3 1.0
N B:VAL319 2.8 48.1 1.0
C A:GLN279 2.8 65.4 1.0
CD A:ARG241 2.8 47.5 1.0
N B:THR318 2.8 63.9 1.0
NZ B:LYS224 2.8 100.0 1.0
C A:TRP255 2.8 50.6 1.0
CA B:TYR296 2.8 86.8 1.0
N B:THR320 2.8 81.8 1.0
CG B:ASN385 2.9 0.0 1.0
C B:ASP358 2.9 99.7 1.0
CB A:SER309 2.9 93.3 1.0
C8 B:NAG806 2.9 64.2 0.8
CG2 B:VAL297 2.9 77.0 1.0
O B:GLY386 2.9 57.8 1.0
CG A:ASN304 2.9 57.1 1.0
O A:ASP274 2.9 85.4 1.0
CG B:LYS224 2.9 100.0 1.0
N B:GLU291 2.9 99.8 1.0
C1 B:NAG807 2.9 62.6 0.5
CB B:ASP358 2.9 96.2 1.0
OE1 B:GLU291 3.0 52.9 1.0
CG A:ASP248 3.0 28.0 1.0
CA A:TRP255 3.0 50.6 1.0
C3 B:NAG806 3.0 64.2 0.8
C A:ALA254 3.0 24.4 1.0
CG A:GLN279 3.0 47.4 1.0
CG B:GLN295 3.0 77.0 1.0
CG2 B:THR389 3.0 85.1 1.0
CA B:VAL297 3.0 58.8 1.0
N B:VAL321 3.0 0.0 1.0
C A:ASN217 3.0 65.3 1.0
CG2 B:THR320 3.1 82.8 1.0
CG2 B:THR225 3.1 68.6 1.0
CB B:ASP360 3.1 90.8 1.0
C B:PHE290 3.1 52.9 1.0
O A:SER309 3.1 59.9 1.0
N B:VAL297 3.1 58.8 1.0
CD B:LYS224 3.1 100.0 1.0
O A:GLY120 3.1 54.5 1.0
N B:ASP358 3.2 99.7 1.0
OG A:SER309 3.2 93.3 1.0
CA B:VAL319 3.2 48.1 1.0
OD1 B:ASP358 3.2 96.2 1.0
N B:ASN385 3.2 70.8 1.0
C B:LYS361 3.2 71.2 1.0
O B:GLN295 3.2 91.9 1.0
C B:GLU291 3.2 99.8 1.0
CB B:ASN382 3.2 64.0 1.0
CD B:GLN363 3.2 0.0 1.0
CB A:ASP216 3.3 10.1 1.0
CB A:ALA257 3.3 51.8 1.0
CA B:ASP358 3.3 99.7 1.0
CB B:LYS361 3.3 99.8 1.0
CD A:PRO123 3.3 59.7 1.0
N A:ALA257 3.3 51.8 1.0
CA A:ASN217 3.3 65.3 1.0
CG A:PRO123 3.3 59.7 1.0
OD1 A:ASP274 3.3 0.0 1.0
O B:ALA356 3.3 52.5 1.0
C B:VAL321 3.4 0.0 1.0
C4 B:NAG806 3.4 64.2 0.8
C A:ALA214 3.4 30.5 1.0
CB A:ASP274 3.4 0.0 1.0
C B:THR320 3.4 81.8 1.0
N A:TRP255 3.5 50.6 1.0
O B:LYS224 3.5 96.8 1.0
CB B:VAL297 3.5 77.0 1.0
O B:LYS361 3.5 71.2 1.0
O A:ALA214 3.5 30.5 1.0
OE2 A:GLU238 3.5 84.3 1.0
CD2 B:LEU367 3.5 55.1 1.0
CG A:ASP216 3.5 10.1 1.0
CA B:ARG293 3.5 59.5 1.0
CA B:PRO359 3.5 92.7 1.0
CE2 B:TYR369 3.5 55.3 1.0
CB B:GLN363 3.6 0.0 1.0
O A:ASP216 3.6 48.2 1.0
C B:GLY348 3.6 77.9 1.0
OD2 A:ASP248 3.6 28.0 1.0
OE1 B:GLN363 3.6 0.0 1.0
CB B:TYR296 3.6 99.4 1.0
NE2 A:GLN279 3.6 47.4 1.0
CG B:ASN382 3.6 64.0 1.0
ND2 A:ASN215 3.7 28.6 1.0
N A:GLN256 3.7 30.5 1.0
NE2 B:GLN363 3.7 0.0 1.0
C6 B:NAG806 3.7 64.2 0.8
N B:PRO359 3.7 92.7 1.0
C A:SER309 3.7 59.9 1.0
OD1 B:ASN385 3.7 0.0 1.0
CG A:GLN122 3.7 73.0 1.0
O6 B:NAG805 3.7 89.5 1.0
CD1 A:ILE281 3.7 71.3 1.0
OD2 A:ASP216 3.7 10.1 1.0
O B:GLU291 3.7 99.8 1.0
C B:ILE387 3.7 60.1 1.0
CG B:ASP358 3.7 96.2 1.0
C A:GLN256 3.7 30.5 1.0
CG2 A:VAL310 3.7 67.6 1.0
CG2 A:VAL244 3.8 58.7 1.0
N A:SER277 3.8 84.8 1.0
N B:GLN362 3.8 0.0 1.0
C5 B:NAG807 3.8 62.6 0.5
OD1 B:ASN382 3.8 64.0 1.0
CD B:LYS294 3.8 100.0 1.0
OE1 A:GLN122 3.8 73.0 1.0
CD1 B:TYR369 3.8 55.3 1.0
CD A:GLN122 3.8 73.0 1.0
CA A:ASP246 3.8 85.4 1.0
O B:THR316 3.8 79.8 1.0
OE2 B:GLU291 3.8 52.9 1.0
CA A:GLY120 3.8 54.5 1.0
OD1 A:ASP216 3.8 10.1 1.0
O B:ILE387 3.9 60.1 1.0
CA A:SER309 3.9 59.9 1.0
CA A:ALA257 3.9 51.8 1.0
CB A:ASP248 3.9 28.0 1.0
C A:ASP274 3.9 85.4 1.0
CA A:ALA254 3.9 24.4 1.0
CG A:ASP274 3.9 0.0 1.0
CD A:GLN279 3.9 47.4 1.0
CA B:VAL321 3.9 0.0 1.0
CA B:GLY348 3.9 77.9 1.0
N A:ASP274 3.9 85.4 1.0
N B:ARG293 3.9 59.5 1.0
CA A:GLN256 4.0 30.5 1.0
CG A:ARG241 4.0 47.5 1.0
CA A:SER277 4.0 84.8 1.0
CG1 B:VAL297 4.0 77.0 1.0
CD1 B:TYR296 4.0 99.4 1.0
N B:LEU292 4.0 96.5 1.0
CB A:GLU276 4.0 78.3 1.0
CG A:PRO219 4.0 52.0 1.0
C B:ALA317 4.0 65.8 1.0
C A:GLY120 4.0 54.5 1.0
N A:GLY280 4.0 0.0 1.0
CB A:ALA214 4.0 30.5 1.0
CB A:ASN217 4.1 53.4 1.0
CA A:ASP274 4.1 85.4 1.0
CB A:ALA254 4.1 24.4 1.0
OG B:SER315 4.1 41.5 1.0
O3 B:NAG806 4.1 64.2 0.8
O B:LEU354 4.1 62.9 1.0
O B:ASN382 4.1 65.2 1.0
C6 B:NAG807 4.1 62.6 0.5
CB A:TRP255 4.2 53.1 1.0
C2 B:NAG807 4.2 62.6 0.5
O6 B:NAG806 4.2 64.2 0.8
CA B:THR322 4.2 85.2 1.0
CD B:GLN295 4.2 77.0 1.0
CG B:ASP360 4.2 90.8 1.0
OE1 A:GLU238 4.2 84.3 1.0
C B:VAL297 4.2 58.8 1.0
C B:GLN357 4.2 67.7 1.0
ND2 B:ASN382 4.2 64.0 1.0
N A:SER309 4.2 59.9 1.0
CD B:LYS366 4.2 78.0 1.0
N A:ALA218 4.2 45.7 1.0
N B:LEU298 4.2 69.5 1.0
CB B:THR225 4.2 68.6 1.0
CG A:TRP255 4.2 53.1 1.0
N B:VAL323 4.2 0.0 1.0
CB B:THR389 4.2 85.1 1.0
CG2 B:VAL323 4.3 37.3 1.0
C B:ASP384 4.3 76.5 1.0
CB A:VAL310 4.3 67.6 1.0
C6 B:NAG805 4.3 89.5 1.0
NE2 A:GLN122 4.3 73.0 1.0
CD1 B:LEU367 4.3 55.1 1.0
O A:GLN256 4.3 30.5 1.0
O B:LEU298 4.3 69.5 1.0
CA B:GLN357 4.3 67.7 1.0
C B:LYS224 4.3 96.8 1.0
CG B:TYR296 4.4 99.4 1.0
CD A:GLU238 4.4 84.3 1.0
CB B:LYS224 4.4 100.0 1.0
CG B:LEU367 4.4 55.1 1.0
N B:THR322 4.4 85.2 1.0
C B:ALA356 4.4 52.5 1.0
CD1 A:TRP255 4.4 53.1 1.0
CB B:VAL323 4.4 37.3 1.0
N A:ASP246 4.4 85.4 1.0
N B:GLN363 4.4 0.0 1.0
CB A:PRO219 4.4 52.0 1.0
CA B:GLN363 4.4 0.0 1.0
CB A:ASN304 4.4 57.1 1.0
N A:GLU276 4.4 78.0 1.0
CD2 B:PHE290 4.5 99.0 1.0
CB A:GLN122 4.5 73.0 1.0
OE1 B:GLN295 4.5 77.0 1.0
CB B:ARG293 4.5 0.0 1.0
N A:VAL310 4.5 53.9 1.0
O B:ASP384 4.5 76.5 1.0
CA B:PHE290 4.5 52.9 1.0
CA A:GLN122 4.5 41.9 1.0
O4 B:NAG806 4.5 64.2 0.8
CA B:ASN382 4.5 65.2 1.0
CD2 A:TRP255 4.5 53.1 1.0
CA A:ALA214 4.5 30.5 1.0
OE1 B:GLN357 4.5 96.0 1.0
ND2 A:ASN217 4.6 53.4 1.0
O B:VAL323 4.6 0.0 1.0
CD2 B:TYR369 4.6 55.3 1.0
CG2 A:THR177 4.6 34.9 1.0
N B:ASN382 4.6 65.2 1.0
CA B:THR225 4.6 79.0 1.0
O B:THR320 4.6 81.8 1.0
OD1 B:ASP360 4.6 90.8 1.0
CB B:VAL321 4.6 44.5 1.0
CA A:ALA218 4.6 45.7 1.0
O B:ARG347 4.6 56.1 1.0
O A:VAL121 4.6 44.7 1.0
CG B:TYR369 4.6 55.3 1.0
N B:ALA356 4.6 52.5 1.0
C A:ASP246 4.6 85.4 1.0
CA B:ALA317 4.6 65.8 1.0
CE1 B:TYR296 4.7 99.4 1.0
OH A:TYR259 4.7 39.1 1.0
OG1 B:THR322 4.7 99.7 1.0
N B:GLU349 4.7 68.4 1.0
CG1 B:VAL355 4.7 82.9 1.0
N A:ASP248 4.7 22.1 1.0
CB B:VAL319 4.7 20.8 1.0
N A:PRO123 4.7 59.7 1.0
C B:THR316 4.7 79.8 1.0
CB B:PRO359 4.7 92.7 1.0
CG B:LYS361 4.7 99.8 1.0
C A:ALA218 4.7 45.7 1.0
CB A:PRO123 4.8 59.7 1.0
OD1 B:ASP325 4.8 64.5 1.0
CB A:ILE281 4.8 71.3 1.0
CG1 A:ILE281 4.8 71.3 1.0
N A:PRO219 4.8 52.0 1.0
CD A:PRO219 4.8 52.0 1.0
C B:LEU292 4.8 96.5 1.0
O B:ALA317 4.8 65.8 1.0
C A:GLU276 4.8 78.0 1.0
CB A:SER277 4.8 97.7 1.0
OD2 B:ASP360 4.8 90.8 1.0
CD1 A:LEU312 4.8 28.0 1.0
N A:LEU247 4.8 48.5 1.0
CA A:GLU276 4.8 78.0 1.0
N B:VAL388 4.8 60.0 1.0
CD1 A:PHE308 4.8 0.0 1.0
CE2 A:TRP255 4.8 53.1 1.0
CB B:PHE290 4.8 99.0 1.0
CE3 A:TRP255 4.8 53.1 1.0
C B:ASN382 4.8 65.2 1.0
CA A:PRO219 4.8 52.0 1.0
NE2 B:GLN365 4.9 0.0 1.0
CE2 B:PHE290 4.9 99.0 1.0
OG1 B:THR389 4.9 85.1 1.0
OE1 B:GLN365 4.9 0.0 1.0
N2 B:NAG807 4.9 62.6 0.5
CD B:GLN365 4.9 0.0 1.0
CG2 A:THR273 4.9 77.4 1.0
O A:LEU242 4.9 98.3 1.0
CA B:CA915 4.9 70.2 1.0
NE1 A:TRP255 4.9 53.1 1.0
C B:THR322 4.9 85.2 1.0
CG B:LYS366 4.9 78.0 1.0
CB B:GLN362 4.9 0.0 1.0
CA B:VAL355 4.9 83.7 1.0
CD B:PRO359 4.9 92.7 1.0
OE1 A:GLN279 4.9 47.4 1.0
CA B:VAL323 5.0 0.0 1.0
N B:GLN357 5.0 67.7 1.0
N B:THR225 5.0 79.0 1.0
OD2 B:ASP358 5.0 96.2 1.0
CG B:GLN299 5.0 0.0 1.0
CA B:LYS224 5.0 96.8 1.0
CG A:ASN217 5.0 53.4 1.0
CB A:ARG241 5.0 47.5 1.0
CA A:ASP248 5.0 22.1 1.0

Calcium binding site 7 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 7 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 7 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca911

b:37.4
occ:1.00
 O A:ASP289 0.5 0.0 1.0
N A:ASP414 0.5 82.6 1.0
CD1 A:PHE290 0.6 99.0 1.0
CG2 A:THR413 0.6 0.0 1.0
O A:GLU328 0.7 0.0 1.0
CB A:ASP414 0.9 82.2 1.0
C A:GLU328 0.9 0.0 1.0
CG A:PHE290 1.0 99.0 1.0
CZ A:PHE370 1.0 98.2 1.0
CB A:THR413 1.0 0.0 1.0
OE2 A:GLU265 1.2 85.5 1.0
C A:THR413 1.2 99.8 1.0
C A:ASP289 1.2 0.0 1.0
CE1 A:PHE290 1.2 99.0 1.0
OG1 A:THR413 1.3 0.0 1.0
CZ A:PHE290 1.3 99.0 1.0
CB A:PHE290 1.4 99.0 1.0
CA A:ASP414 1.4 82.6 1.0
CG A:GLU265 1.4 85.5 1.0
CA A:GLU328 1.4 0.0 1.0
CD A:GLU328 1.5 0.0 1.0
OE1 A:GLU328 1.5 0.0 1.0
OE2 A:GLU328 1.5 0.0 1.0
CD A:GLU265 1.6 85.5 1.0
CA A:THR413 1.6 99.8 1.0
N A:GLU328 1.7 0.0 1.0
CE2 A:PHE370 1.7 98.2 1.0
CA A:PHE290 1.8 52.9 1.0
CB A:GLU328 1.9 0.0 1.0
CB A:GLU265 1.9 85.5 1.0
N A:PHE290 1.9 52.9 1.0
CE1 A:PHE370 1.9 98.2 1.0
OH A:TYR296 2.0 99.4 1.0
OE2 A:GLU291 2.0 52.9 1.0
CG1 A:VAL263 2.0 60.8 1.0
CE2 A:PHE290 2.0 99.0 1.0
N A:ALA329 2.0 93.5 1.0
CG A:ASP414 2.1 82.2 1.0
CD2 A:PHE290 2.1 99.0 1.0
CG2 A:VAL263 2.1 60.8 1.0
OE2 A:GLU232 2.1 49.7 1.0
O A:THR413 2.1 99.8 1.0
OD2 A:ASP289 2.2 99.7 1.0
OD2 A:ASP414 2.3 82.2 1.0
CA A:CA912 2.3 90.9 1.0
CA A:ALA329 2.3 93.5 1.0
CG A:GLU328 2.4 0.0 1.0
C A:ASP414 2.4 82.6 1.0
OG A:SER368 2.5 0.0 1.0
NH1 A:ARG293 2.5 0.0 1.0
CA A:ASP289 2.6 0.0 1.0
CB A:VAL263 2.6 60.8 1.0
OE1 A:GLU265 2.6 85.5 1.0
CD A:GLU232 2.6 49.7 1.0
OD2 A:ASP360 2.7 90.8 1.0
CD A:PRO330 2.7 43.9 1.0
CG A:ASP289 2.7 99.7 1.0
CA A:GLY420 2.8 93.4 1.0
OD1 A:ASP360 2.8 90.8 1.0
CA A:GLU265 2.8 67.9 1.0
CG A:PRO359 2.8 92.7 1.0
OD2 A:ASP358 2.9 96.2 1.0
O A:ASP414 2.9 82.6 1.0
CB A:ASP289 2.9 99.7 1.0
OE1 A:GLU232 2.9 49.7 1.0
CA A:CA915 2.9 70.2 1.0
O A:VAL419 2.9 0.0 1.0
NZ A:LYS383 2.9 100.0 1.0
N A:THR413 2.9 99.8 1.0
C A:ASN327 2.9 0.0 1.0
C A:ALA329 3.0 93.5 1.0
C A:PHE290 3.0 52.9 1.0
N A:GLU291 3.0 99.8 1.0
CG A:ARG293 3.0 0.0 1.0
O A:GLY420 3.1 93.4 1.0
CE2 A:TYR296 3.1 99.4 1.0
CD A:GLU291 3.1 52.9 1.0
OD1 A:ASP414 3.1 82.2 1.0
CZ A:TYR296 3.1 99.4 1.0
CD1 A:PHE370 3.1 98.2 1.0
CD2 A:PHE370 3.1 98.2 1.0
CG A:PRO330 3.1 43.9 1.0
N A:ASP289 3.2 0.0 1.0
OD1 A:ASN327 3.2 0.0 1.0
CZ A:ARG293 3.2 0.0 1.0
CG A:ASP360 3.2 90.8 1.0
NH2 A:ARG293 3.2 0.0 1.0
N A:GLY420 3.2 93.4 1.0
N A:PRO330 3.3 43.9 1.0
C A:GLY420 3.3 93.4 1.0
CZ A:PHE268 3.3 68.6 1.0
OE1 A:GLU291 3.4 52.9 1.0
CB A:LEU292 3.4 73.5 1.0
N A:ASP415 3.5 66.8 1.0
C A:VAL419 3.5 0.0 1.0
O A:ALA329 3.5 93.5 1.0
CB A:ARG293 3.5 0.0 1.0
CG A:GLU232 3.5 49.7 1.0
N A:GLU265 3.6 67.9 1.0
CB A:PRO359 3.6 92.7 1.0
OD1 A:ASP289 3.6 99.7 1.0
O A:ASN327 3.6 0.0 1.0
N A:LEU292 3.7 96.5 1.0
CB A:ALA329 3.7 93.5 1.0
CG A:PHE370 3.7 98.2 1.0
CB A:SER368 3.8 0.0 1.0
CE2 A:PHE268 3.8 68.6 1.0
N A:ARG293 3.9 59.5 1.0
CA A:ASN327 3.9 0.0 1.0
O A:SER368 3.9 99.5 1.0
C A:GLU265 3.9 67.9 1.0
CG A:ASP358 4.0 96.2 1.0
O A:VAL326 4.0 0.0 1.0
CG A:LEU292 4.0 73.5 1.0
CD A:PRO359 4.0 92.7 1.0
CA A:VAL263 4.0 65.6 1.0
CD1 A:LEU292 4.0 73.5 1.0
C A:VAL412 4.0 0.0 1.0
CA A:LEU292 4.1 96.5 1.0
O A:PHE290 4.1 52.9 1.0
NE A:ARG293 4.1 0.0 1.0
CE1 A:PHE268 4.2 68.6 1.0
N A:ASP360 4.2 65.5 1.0
OD1 A:ASP358 4.2 96.2 1.0
N A:THR421 4.2 0.0 1.0
CE1 A:TYR296 4.2 99.4 1.0
CD2 A:TYR296 4.2 99.4 1.0
CD A:ARG293 4.2 0.0 1.0
O A:VAL412 4.2 0.0 1.0
N A:SER368 4.3 99.5 1.0
CA A:GLU291 4.3 99.8 1.0
CE A:LYS383 4.3 100.0 1.0
CB A:GLU291 4.3 52.9 1.0
CG A:ASN327 4.3 0.0 1.0
CG A:GLU291 4.4 52.9 1.0
NH2 A:ARG262 4.4 61.2 1.0
C A:LEU292 4.4 96.5 1.0
O A:VAL263 4.4 65.6 1.0
C A:LEU288 4.4 0.0 1.0
C A:VAL263 4.4 65.6 1.0
CA A:ARG293 4.4 59.5 1.0
CD A:LYS383 4.5 100.0 1.0
N A:GLY266 4.5 19.2 1.0
CA A:PRO330 4.5 43.9 1.0
O A:GLU265 4.5 67.9 1.0
CB A:PRO330 4.5 43.9 1.0
CB A:LEU367 4.6 55.1 1.0
CA A:SER368 4.6 99.5 1.0
C A:GLU291 4.6 99.8 1.0
CB A:ASP360 4.6 90.8 1.0
CA A:ASP415 4.6 66.8 1.0
C A:SER368 4.6 99.5 1.0
O A:ARG293 4.6 59.5 1.0
CA A:VAL419 4.7 0.0 1.0
C A:ASN264 4.7 46.2 1.0
OE1 A:GLN365 4.7 0.0 1.0
CB A:ASP415 4.8 100.0 1.0
CA A:PRO359 4.8 92.7 1.0
CB A:ASN327 4.8 0.0 1.0
N A:VAL263 4.8 65.6 1.0
CA A:ASP360 4.9 65.5 1.0
C A:VAL326 4.9 0.0 1.0
N A:ASN327 4.9 0.0 1.0
CA A:LEU367 4.9 89.4 1.0
NE2 A:GLN365 4.9 0.0 1.0
CB A:GLU232 4.9 49.7 1.0
CB A:LEU288 4.9 56.4 1.0
OD2 A:ASP325 4.9 64.5 1.0
N A:PRO359 5.0 92.7 1.0
C A:PRO359 5.0 92.7 1.0

Calcium binding site 8 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 8 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 8 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca912

b:90.9
occ:1.00
 CD2 A:PHE290 0.8 99.0 1.0
OD1 A:ASP360 0.8 90.8 1.0
CG A:ASP414 0.9 82.2 1.0
OD2 A:ASP360 0.9 90.8 1.0
OD1 A:ASP414 0.9 82.2 1.0
N A:GLU291 0.9 99.8 1.0
CA A:ASP414 0.9 82.6 1.0
OE2 A:GLU291 0.9 52.9 1.0
CG A:ASP360 1.0 90.8 1.0
CD A:GLU291 1.0 52.9 1.0
OE1 A:GLU291 1.1 52.9 1.0
CB A:PHE290 1.1 99.0 1.0
C A:ASP414 1.1 82.6 1.0
C A:PHE290 1.1 52.9 1.0
CB A:ARG293 1.2 0.0 1.0
CA A:PHE290 1.3 52.9 1.0
N A:ASP415 1.3 66.8 1.0
CE2 A:PHE290 1.3 99.0 1.0
CG A:PHE290 1.4 99.0 1.0
NH2 A:ARG293 1.5 0.0 1.0
CB A:ASP414 1.5 82.2 1.0
OD1 A:ASN327 1.5 0.0 1.0
CG A:ARG293 1.5 0.0 1.0
CA A:CA915 1.6 70.2 1.0
OG A:SER368 1.7 0.0 1.0
OD2 A:ASP414 1.7 82.2 1.0
CZ A:ARG293 1.7 0.0 1.0
N A:ARG293 1.7 59.5 1.0
O A:THR413 1.9 99.8 1.0
N A:ASP414 2.1 82.6 1.0
NH1 A:ARG293 2.1 0.0 1.0
CA A:ARG293 2.2 59.5 1.0
N A:LEU292 2.2 96.5 1.0
O A:GLU328 2.2 0.0 1.0
CG2 A:THR413 2.2 0.0 1.0
C A:THR413 2.2 99.8 1.0
CA A:GLU291 2.2 99.8 1.0
CA A:CA911 2.3 37.4 1.0
O A:PHE290 2.3 52.9 1.0
O A:ASP414 2.3 82.6 1.0
NE A:ARG293 2.4 0.0 1.0
CZ A:PHE290 2.4 99.0 1.0
OE1 A:GLU328 2.4 0.0 1.0
CB A:ASP360 2.4 90.8 1.0
CG A:GLU291 2.4 52.9 1.0
N A:GLU328 2.4 0.0 1.0
OE2 A:GLU265 2.5 85.5 1.0
OE1 A:GLN365 2.6 0.0 1.0
CB A:GLU291 2.6 52.9 1.0
N A:PHE290 2.6 52.9 1.0
OD2 A:ASP358 2.6 96.2 1.0
CD A:ARG293 2.6 0.0 1.0
OH A:TYR296 2.7 99.4 1.0
CA A:ASP415 2.7 66.8 1.0
CG A:ASN327 2.7 0.0 1.0
CB A:ASP415 2.7 100.0 1.0
O A:ASP289 2.7 0.0 1.0
CD1 A:PHE290 2.8 99.0 1.0
O A:ARG293 2.8 59.5 1.0
C A:LEU292 2.8 96.5 1.0
CZ A:PHE370 2.8 98.2 1.0
C A:GLU291 2.9 99.8 1.0
C A:ARG293 2.9 59.5 1.0
CB A:SER368 2.9 0.0 1.0
OE1 A:GLU232 2.9 49.7 1.0
N A:ASP360 3.0 65.5 1.0
CA A:LEU292 3.0 96.5 1.0
CA A:ASP360 3.0 65.5 1.0
NE2 A:GLN365 3.0 0.0 1.0
OD1 A:ASP358 3.0 96.2 1.0
CZ A:TYR296 3.1 99.4 1.0
CE1 A:PHE290 3.1 99.0 1.0
C A:ASN327 3.1 0.0 1.0
C A:GLU328 3.1 0.0 1.0
CD A:GLU265 3.1 85.5 1.0
CA A:ASN327 3.1 0.0 1.0
C A:ASP289 3.1 0.0 1.0
CB A:LEU292 3.2 73.5 1.0
OG1 A:THR413 3.2 0.0 1.0
CE2 A:TYR296 3.2 99.4 1.0
CB A:THR413 3.2 0.0 1.0
CD A:GLN365 3.3 0.0 1.0
CE1 A:PHE370 3.3 98.2 1.0
CG A:ASP358 3.3 96.2 1.0
CA A:GLU328 3.3 0.0 1.0
CD A:GLU328 3.3 0.0 1.0
O A:VAL326 3.4 0.0 1.0
O A:ASP415 3.4 66.8 1.0
ND2 A:ASN327 3.4 0.0 1.0
CD A:GLU232 3.5 49.7 1.0
N A:SER368 3.5 99.5 1.0
CA A:THR413 3.5 99.8 1.0
OD2 A:ASP325 3.5 64.5 1.0
CA A:LEU367 3.5 89.4 1.0
CB A:ASN327 3.5 0.0 1.0
O A:LYS366 3.6 87.4 1.0
CG A:PRO359 3.6 92.7 1.0
C A:ASP415 3.6 66.8 1.0
CG A:GLU265 3.7 85.5 1.0
OE2 A:GLU328 3.7 0.0 1.0
O A:GLN295 3.7 91.9 1.0
OE2 A:GLU232 3.7 49.7 1.0
CE1 A:TYR296 3.7 99.4 1.0
OE1 A:GLU265 3.7 85.5 1.0
O A:LEU292 3.7 96.5 1.0
CB A:LEU367 3.8 55.1 1.0
O A:VAL419 3.8 0.0 1.0
CE2 A:PHE370 3.9 98.2 1.0
CG2 A:VAL263 3.9 60.8 1.0
CD2 A:TYR296 3.9 99.4 1.0
CA A:SER368 4.0 99.5 1.0
O A:ASN327 4.0 0.0 1.0
CB A:GLU265 4.0 85.5 1.0
CG A:ASP415 4.0 100.0 1.0
N A:LYS294 4.1 0.0 1.0
CG A:PRO330 4.1 43.9 1.0
C A:LEU367 4.1 89.4 1.0
CB A:PRO359 4.1 92.7 1.0
CB A:GLU328 4.1 0.0 1.0
O A:GLU291 4.1 99.8 1.0
C A:PRO359 4.1 92.7 1.0
CG1 A:VAL263 4.1 60.8 1.0
NZ A:LYS383 4.2 100.0 1.0
CG A:LEU292 4.2 73.5 1.0
CB A:VAL263 4.2 60.8 1.0
OD1 A:ASP325 4.3 64.5 1.0
OD2 A:ASP415 4.3 100.0 1.0
N A:ALA329 4.3 93.5 1.0
OD2 A:ASP289 4.3 99.7 1.0
CD A:PRO330 4.3 43.9 1.0
CG A:ASP325 4.4 64.5 1.0
N A:ASN327 4.4 0.0 1.0
C A:LYS366 4.4 87.4 1.0
C A:VAL419 4.4 0.0 1.0
NH2 A:ARG262 4.4 61.2 1.0
CG A:GLU328 4.4 0.0 1.0
CG A:GLU232 4.4 49.7 1.0
C A:VAL326 4.4 0.0 1.0
N A:LEU367 4.4 89.4 1.0
C A:ASP360 4.5 65.5 1.0
N A:THR413 4.5 99.8 1.0
CA A:ASP289 4.5 0.0 1.0
CA A:ALA329 4.6 93.5 1.0
CD A:PRO359 4.6 92.7 1.0
CD A:LYS383 4.6 100.0 1.0
CA A:PRO359 4.6 92.7 1.0
O A:SER368 4.6 99.5 1.0
CD1 A:TYR296 4.6 99.4 1.0
CD1 A:PHE370 4.7 98.2 1.0
CG A:GLN365 4.7 0.0 1.0
N A:GLY420 4.7 93.4 1.0
CG A:TYR296 4.7 99.4 1.0
CB A:ASP358 4.8 96.2 1.0
O A:VAL297 4.8 58.8 1.0
C A:SER368 4.8 99.5 1.0
CA A:GLY420 4.8 93.4 1.0
C A:ALA329 4.8 93.5 1.0
N A:PRO330 4.9 43.9 1.0
N A:GLY416 4.9 99.5 1.0
C A:GLN295 4.9 91.9 1.0
CG A:ASP289 4.9 99.7 1.0
N A:PRO359 4.9 92.7 1.0
N A:ASP289 4.9 0.0 1.0
CB A:GLN365 5.0 0.0 1.0
O A:ASP360 5.0 65.5 1.0
CE A:LYS383 5.0 100.0 1.0

Calcium binding site 9 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 9 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 9 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca913

b:34.6
occ:1.00
 CB A:ARG396 0.4 100.0 1.0
ND2 A:ASN404 0.8 100.0 1.0
CG A:ARG396 0.9 100.0 1.0
OE1 A:GLU397 1.3 75.5 1.0
CD A:ARG396 1.4 100.0 1.0
CG A:ASN404 1.6 100.0 1.0
CA A:ARG396 1.6 89.7 1.0
OE1 A:GLU343 1.8 72.9 1.0
CE1 A:HIS429 1.8 69.8 1.0
OD2 A:ASP395 1.9 88.0 1.0
N A:ARG396 2.0 89.7 1.0
OD1 A:ASN404 2.0 100.0 1.0
ND1 A:HIS429 2.0 69.8 1.0
O A:VAL430 2.0 0.0 1.0
NE2 A:HIS429 2.1 69.8 1.0
N A:GLU397 2.2 0.0 1.0
OD1 A:ASP435 2.3 64.9 1.0
CD2 A:HIS429 2.3 69.8 1.0
CG A:ASP395 2.4 88.0 1.0
C A:ARG396 2.4 89.7 1.0
OD1 A:ASP395 2.4 88.0 1.0
CG A:ASP435 2.5 64.9 1.0
CD A:GLU397 2.5 75.5 1.0
OE2 A:GLU343 2.6 72.9 1.0
CG A:HIS429 2.7 69.8 1.0
OD2 A:ASP435 2.7 64.9 1.0
CD A:GLU343 2.7 72.9 1.0
C A:VAL430 2.7 0.0 1.0
NE A:ARG396 2.7 100.0 1.0
CB A:ASN404 2.8 100.0 1.0
O A:ASN404 2.8 0.0 1.0
C A:ASP395 2.9 76.5 1.0
CA A:CA916 2.9 85.4 1.0
O A:LEU431 2.9 0.0 1.0
CB A:ASP435 3.1 64.9 1.0
N A:LEU431 3.2 0.0 1.0
CB A:GLU397 3.2 75.5 1.0
CB A:VAL430 3.3 99.6 1.0
CA A:ASP395 3.3 76.5 1.0
O A:ARG396 3.3 89.7 1.0
OE2 A:GLU397 3.3 75.5 1.0
CG1 A:VAL430 3.3 99.6 1.0
CG A:GLU397 3.3 75.5 1.0
CA A:GLU397 3.4 0.0 1.0
C A:LEU431 3.4 0.0 1.0
CA A:VAL430 3.4 0.0 1.0
CB A:ASP395 3.5 88.0 1.0
N A:VAL430 3.5 0.0 1.0
CA A:LEU431 3.5 0.0 1.0
C A:ASN404 3.6 0.0 1.0
CZ A:ARG396 3.6 100.0 1.0
NH1 A:ARG396 3.7 100.0 1.0
O A:ASP395 3.7 76.5 1.0
CA A:ASN404 3.8 0.0 1.0
CB A:HIS429 3.8 69.8 1.0
CG A:GLU343 3.9 72.9 1.0
CA A:HIS429 4.1 0.0 1.0
OD1 A:ASP432 4.1 99.7 1.0
C A:HIS429 4.1 0.0 1.0
N A:ASP432 4.2 0.0 1.0
CB A:GLU343 4.4 72.9 1.0
CG2 A:VAL433 4.5 38.3 1.0
CA A:ASP432 4.5 0.0 1.0
CG2 A:VAL430 4.6 99.6 1.0
CA A:ASP435 4.6 99.6 1.0
N A:ASP395 4.6 76.5 1.0
C A:GLU397 4.7 0.0 1.0
OD1 A:ASN436 4.7 72.3 1.0
ND2 A:ASN436 4.8 72.3 1.0
NH2 A:ARG396 4.8 100.0 1.0
N A:THR405 4.9 0.0 1.0
CB A:ASP432 4.9 99.7 1.0
O A:HIS429 5.0 0.0 1.0
CB A:LEU431 5.0 65.8 1.0

Calcium binding site 10 out of 48 in 1q55

Go back to Calcium Binding Sites List in 1q55
Calcium binding site 10 out of 48 in the W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 10 of W-Shaped Trans Interactions of Cadherins Model Based on Fitting C- Cadherin (1L3W) to 3D Map of Desmosomes Obtained By Electron Tomography within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca914

b:69.9
occ:1.00
 CG A:PRO520 0.3 95.2 1.0
CG A:GLN521 0.6 0.0 1.0
C A:ILE464 0.6 88.0 1.0
O A:ILE464 0.7 88.0 1.0
CD A:GLN521 1.0 0.0 1.0
N A:PRO465 1.3 91.0 1.0
CD A:PRO520 1.4 95.2 1.0
NE2 A:GLN521 1.5 0.0 1.0
CB A:GLN521 1.6 0.0 1.0
CA A:GLY437 1.6 93.1 1.0
O A:ASN436 1.7 56.8 1.0
CB A:PRO520 1.7 95.2 1.0
OD1 A:ASN434 1.9 68.5 1.0
CB A:ASP463 1.9 90.9 1.0
O A:PRO465 2.0 91.0 1.0
CB A:ASN467 2.0 73.4 1.0
CA A:ILE464 2.0 88.0 1.0
CG1 A:ILE464 2.1 100.0 1.0
CA A:PRO520 2.1 95.2 1.0
OE1 A:GLN521 2.1 0.0 1.0
CA A:PRO465 2.1 91.0 1.0
O A:ASN467 2.2 44.5 1.0
OD2 A:ASP515 2.3 0.0 1.0
N A:PRO520 2.3 95.2 1.0
N A:GLY437 2.3 93.1 1.0
N A:GLN521 2.3 0.0 1.0
N A:ILE464 2.3 88.0 1.0
OD1 A:ASP463 2.4 90.9 1.0
C A:PRO465 2.4 91.0 1.0
C A:ASN436 2.4 56.8 1.0
OD1 A:ASP461 2.5 0.0 1.0
CA A:GLN521 2.5 0.0 1.0
CD1 A:ILE464 2.5 100.0 1.0
CB A:ILE464 2.6 100.0 1.0
C A:ASN467 2.6 44.5 1.0
CG A:ASP463 2.7 90.9 1.0
CD A:PRO465 2.7 91.0 1.0
CA A:ASN467 2.8 44.5 1.0
C A:ASP463 2.9 0.0 1.0
CG2 A:ILE464 3.0 100.0 1.0
C A:GLY437 3.0 93.1 1.0
CG2 A:THR468 3.0 0.0 1.0
CG A:ASN434 3.0 68.5 1.0
CG A:ASP461 3.1 0.0 1.0
CB A:PRO465 3.1 91.0 1.0
CA A:ASP463 3.2 0.0 1.0
C A:PRO520 3.2 95.2 1.0
ND2 A:ASN434 3.2 68.5 1.0
C A:ASN519 3.3 0.0 1.0
OD2 A:ASP461 3.3 0.0 1.0
CG A:ASN467 3.3 73.4 1.0
CD A:PRO438 3.3 75.9 1.0
CG A:ASP515 3.4 0.0 1.0
N A:ASN467 3.4 44.5 1.0
O A:ASN519 3.5 0.0 1.0
N A:THR468 3.5 0.0 1.0
O A:ASP463 3.5 0.0 1.0
OD1 A:ASN467 3.5 73.4 1.0
O A:ASN518 3.5 0.0 1.0
CB A:ASN518 3.5 88.3 1.0
C A:GLN521 3.6 0.0 1.0
N A:PRO466 3.6 0.0 1.0
N A:PRO438 3.6 75.9 1.0
O A:GLN521 3.6 0.0 1.0
CG A:PRO465 3.7 91.0 1.0
OD2 A:ASP432 3.8 99.7 1.0
OD1 A:ASP515 3.9 0.0 1.0
OD2 A:ASP463 3.9 90.9 1.0
C A:ASN518 3.9 0.0 1.0
ND2 A:ASN518 3.9 88.3 1.0
CA A:ASN436 3.9 56.8 1.0
N A:ASP463 4.0 0.0 1.0
O A:GLY437 4.0 93.1 1.0
CA A:THR468 4.1 0.0 1.0
O A:ASP435 4.2 99.6 1.0
CB A:THR468 4.2 0.0 1.0
CB A:ASN434 4.2 68.5 1.0
N A:ASN519 4.2 0.0 1.0
CB A:ASP461 4.2 0.0 1.0
CG A:ASN518 4.2 88.3 1.0
CA A:ASN519 4.2 0.0 1.0
CD A:PRO466 4.3 0.0 1.0
C A:PRO466 4.3 0.0 1.0
O A:PRO520 4.4 95.2 1.0
ND2 A:ASN467 4.4 73.4 1.0
CA A:ASN518 4.4 0.0 1.0
N A:ASN436 4.5 56.8 1.0
CA A:ASN434 4.5 0.0 1.0
CG A:PRO438 4.6 75.9 1.0
CB A:ASP515 4.6 0.0 1.0
C A:ASP435 4.6 99.6 1.0
CB A:ASN519 4.6 100.0 1.0
CA A:PRO466 4.6 0.0 1.0
N A:LEU522 4.7 0.0 1.0
CB A:ASN436 4.8 72.3 1.0
O A:PRO466 4.8 0.0 1.0
C A:ASN434 4.9 0.0 1.0
OG1 A:THR468 4.9 0.0 1.0

Reference:

W.He, P.Cowin, D.L.Stokes. Untangling Desmosomal Knots with Electron Tomography Science V. 302 109 2003.
ISSN: ISSN 0036-8075
PubMed: 14526082
DOI: 10.1126/SCIENCE.1086957
Page generated: Thu Jul 11 13:58:47 2024

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