Calcium in PDB 1qlk: Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures

Calcium Binding Sites:

The binding sites of Calcium atom in the Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures (pdb code 1qlk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures, PDB code: 1qlk:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 1qlk

Go back to Calcium Binding Sites List in 1qlk
Calcium binding site 1 out of 4 in the Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca92

b:0.0
occ:1.00
OE1 A:GLU31 2.6 0.0 1.0
HB2 A:SER18 2.6 0.0 1.0
O A:ASP23 2.7 0.0 1.0
HD13 A:LEU27 2.8 0.0 1.0
O A:LYS26 2.9 0.0 1.0
O A:SER18 3.0 0.0 1.0
HA A:LEU27 3.0 0.0 1.0
HA A:SER18 3.0 0.0 1.0
HB2 A:ASP23 3.4 0.0 1.0
CD A:GLU31 3.4 0.0 1.0
CB A:SER18 3.5 0.0 1.0
CA A:SER18 3.5 0.0 1.0
OE2 A:GLU31 3.5 0.0 1.0
C A:SER18 3.6 0.0 1.0
OE1 A:GLU21 3.6 0.0 1.0
HB3 A:ASP23 3.8 0.0 1.0
CD1 A:LEU27 3.8 0.0 1.0
C A:ASP23 3.8 0.0 1.0
C A:LYS26 4.0 0.0 1.0
CB A:ASP23 4.0 0.0 1.0
CA A:LEU27 4.0 0.0 1.0
H A:LYS28 4.1 0.0 1.0
OE2 A:GLU21 4.1 0.0 1.0
CD A:GLU21 4.1 0.0 1.0
HD12 A:LEU27 4.1 0.0 1.0
HB3 A:SER18 4.1 0.0 1.0
HA A:LYS24 4.2 0.0 1.0
HB2 A:GLU21 4.2 0.0 1.0
HG A:LEU27 4.2 0.0 1.0
OG A:SER18 4.4 0.0 1.0
N A:LEU27 4.5 0.0 1.0
HD11 A:LEU27 4.5 0.0 1.0
H A:LYS26 4.5 0.0 1.0
CG A:LEU27 4.5 0.0 1.0
H A:GLU21 4.5 0.0 1.0
CA A:ASP23 4.5 0.0 1.0
N A:LYS24 4.7 0.0 1.0
N A:LYS28 4.8 0.0 1.0
HB2 A:GLU31 4.8 0.0 1.0
CB A:LEU27 4.8 0.0 1.0
CG A:GLU31 4.9 0.0 1.0
CA A:LYS24 4.9 0.0 1.0
N A:GLY19 4.9 0.0 1.0
N A:SER18 5.0 0.0 1.0
C A:LEU27 5.0 0.0 1.0
H A:ASP23 5.0 0.0 1.0
HB3 A:GLU31 5.0 0.0 1.0

Calcium binding site 2 out of 4 in 1qlk

Go back to Calcium Binding Sites List in 1qlk
Calcium binding site 2 out of 4 in the Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca93

b:0.0
occ:1.00
OE2 A:GLU72 2.1 0.0 1.0
OD1 A:ASP65 2.3 0.0 1.0
OE1 A:GLU72 2.5 0.0 1.0
CD A:GLU72 2.5 0.0 1.0
H A:ASP65 2.7 0.0 1.0
O A:GLU67 2.9 0.0 1.0
OD1 A:ASP63 3.0 0.0 1.0
OD1 A:ASP61 3.0 0.0 1.0
HA A:ASP61 3.1 0.0 1.0
CG A:ASP65 3.2 0.0 1.0
HB3 A:ASP61 3.4 0.0 1.0
CG A:ASP61 3.6 0.0 1.0
N A:ASP65 3.6 0.0 1.0
H A:GLY64 3.7 0.0 1.0
H A:GLU62 3.7 0.0 1.0
OD2 A:ASP65 3.7 0.0 1.0
HA A:CYS68 3.8 0.0 1.0
H A:GLY66 3.8 0.0 1.0
CB A:ASP61 3.8 0.0 1.0
H A:ASP63 3.8 0.0 1.0
CA A:ASP61 3.9 0.0 1.0
H A:GLU67 3.9 0.0 1.0
HA2 A:GLY64 4.0 0.0 1.0
CG A:GLU72 4.0 0.0 1.0
C A:GLU67 4.0 0.0 1.0
N A:GLY64 4.1 0.0 1.0
CG A:ASP63 4.1 0.0 1.0
CB A:ASP65 4.3 0.0 1.0
HG2 A:GLU72 4.3 0.0 1.0
N A:GLU62 4.3 0.0 1.0
CA A:GLY64 4.4 0.0 1.0
HB3 A:ASP65 4.4 0.0 1.0
N A:GLY66 4.5 0.0 1.0
C A:GLY64 4.5 0.0 1.0
N A:GLU67 4.5 0.0 1.0
CA A:ASP65 4.5 0.0 1.0
HG3 A:GLU72 4.5 0.0 1.0
C A:ASP61 4.5 0.0 1.0
OD2 A:ASP61 4.6 0.0 1.0
OD2 A:ASP63 4.6 0.0 1.0
N A:ASP63 4.6 0.0 1.0
CA A:CYS68 4.7 0.0 1.0
HB3 A:GLU72 4.8 0.0 1.0
N A:CYS68 4.8 0.0 1.0
C A:ASP63 4.8 0.0 1.0
HB3 A:CYS68 4.9 0.0 1.0
HB2 A:ASP61 4.9 0.0 1.0
C A:ASP65 4.9 0.0 1.0
H A:ASP69 4.9 0.0 1.0
CB A:GLU72 4.9 0.0 1.0
CA A:GLU67 5.0 0.0 1.0

Calcium binding site 3 out of 4 in 1qlk

Go back to Calcium Binding Sites List in 1qlk
Calcium binding site 3 out of 4 in the Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca92

b:0.0
occ:1.00
HB2 B:SER18 2.5 0.0 1.0
O B:ASP23 2.5 0.0 1.0
O B:LYS26 2.7 0.0 1.0
HD11 B:LEU27 2.9 0.0 1.0
O B:SER18 2.9 0.0 1.0
OE1 B:GLU31 2.9 0.0 1.0
HA B:LEU27 3.1 0.0 1.0
HA B:SER18 3.1 0.0 1.0
CB B:SER18 3.4 0.0 1.0
HB2 B:ASP23 3.4 0.0 1.0
CA B:SER18 3.5 0.0 1.0
C B:SER18 3.6 0.0 1.0
C B:ASP23 3.6 0.0 1.0
HB3 B:ASP23 3.7 0.0 1.0
CD B:GLU31 3.7 0.0 1.0
C B:LYS26 3.8 0.0 1.0
OE2 B:GLU31 3.8 0.0 1.0
OE1 B:GLU21 3.9 0.0 1.0
HA B:LYS24 3.9 0.0 1.0
CD1 B:LEU27 3.9 0.0 1.0
CB B:ASP23 3.9 0.0 1.0
HB3 B:SER18 4.0 0.0 1.0
CA B:LEU27 4.1 0.0 1.0
HG B:SER18 4.2 0.0 1.0
HD13 B:LEU27 4.2 0.0 1.0
H B:LYS26 4.2 0.0 1.0
H B:LYS28 4.3 0.0 1.0
OG B:SER18 4.3 0.0 1.0
HB2 B:GLU21 4.3 0.0 1.0
CD B:GLU21 4.3 0.0 1.0
OE2 B:GLU21 4.4 0.0 1.0
HG B:LEU27 4.4 0.0 1.0
N B:LEU27 4.4 0.0 1.0
CA B:ASP23 4.4 0.0 1.0
N B:LYS24 4.5 0.0 1.0
CA B:LYS24 4.6 0.0 1.0
HD12 B:LEU27 4.6 0.0 1.0
H B:GLU21 4.6 0.0 1.0
CG B:LEU27 4.6 0.0 1.0
N B:LYS26 4.8 0.0 1.0
N B:GLY19 4.8 0.0 1.0
CB B:LEU27 4.9 0.0 1.0
C B:LYS24 4.9 0.0 1.0
H B:ASP23 5.0 0.0 1.0
N B:SER18 5.0 0.0 1.0
CA B:LYS26 5.0 0.0 1.0
N B:LYS28 5.0 0.0 1.0

Calcium binding site 4 out of 4 in 1qlk

Go back to Calcium Binding Sites List in 1qlk
Calcium binding site 4 out of 4 in the Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Solution Structure of Ca(2+)-Loaded Rat S100B (Betabeta) uc(Nmr), 20 Structures within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca93

b:0.0
occ:1.00
OD1 B:ASP65 2.1 0.0 1.0
OE2 B:GLU72 2.2 0.0 1.0
H B:ASP65 2.5 0.0 1.0
OE1 B:GLU72 2.7 0.0 1.0
CD B:GLU72 2.7 0.0 1.0
O B:GLU67 2.9 0.0 1.0
OD1 B:ASP63 2.9 0.0 1.0
CG B:ASP65 3.0 0.0 1.0
OD1 B:ASP61 3.1 0.0 1.0
HA B:ASP61 3.2 0.0 1.0
N B:ASP65 3.4 0.0 1.0
HB3 B:ASP61 3.5 0.0 1.0
OD2 B:ASP65 3.6 0.0 1.0
H B:GLY66 3.6 0.0 1.0
H B:GLY64 3.6 0.0 1.0
CG B:ASP61 3.7 0.0 1.0
H B:GLU67 3.7 0.0 1.0
H B:GLU62 3.8 0.0 1.0
HA2 B:GLY64 3.8 0.0 1.0
H B:ASP63 3.8 0.0 1.0
HA B:CYS68 3.9 0.0 1.0
CB B:ASP61 3.9 0.0 1.0
N B:GLY64 4.0 0.0 1.0
CA B:ASP61 4.0 0.0 1.0
C B:GLU67 4.0 0.0 1.0
CG B:ASP63 4.0 0.0 1.0
CB B:ASP65 4.1 0.0 1.0
CG B:GLU72 4.2 0.0 1.0
CA B:GLY64 4.2 0.0 1.0
HB3 B:ASP65 4.3 0.0 1.0
CA B:ASP65 4.3 0.0 1.0
N B:GLY66 4.3 0.0 1.0
C B:GLY64 4.3 0.0 1.0
N B:GLU67 4.4 0.0 1.0
N B:GLU62 4.4 0.0 1.0
HG2 B:GLU72 4.5 0.0 1.0
OD2 B:ASP63 4.5 0.0 1.0
OD2 B:ASP61 4.6 0.0 1.0
N B:ASP63 4.6 0.0 1.0
C B:ASP61 4.6 0.0 1.0
HG3 B:GLU72 4.6 0.0 1.0
C B:ASP65 4.7 0.0 1.0
C B:ASP63 4.7 0.0 1.0
CA B:CYS68 4.8 0.0 1.0
N B:CYS68 4.8 0.0 1.0
CA B:GLU67 4.9 0.0 1.0
HB2 B:ASP61 4.9 0.0 1.0
HB3 B:GLU72 4.9 0.0 1.0
H B:ASP69 5.0 0.0 1.0
HB3 B:CYS68 5.0 0.0 1.0

Reference:

A.C.Drohat, D.M.Baldisseri, R.R.Rustandi, D.J.Weber. Solution Structure of Calcium-Bound Rat S100B(Betabeta) As Determined By Nuclear Magnetic Resonance Spectroscopy,. Biochemistry V. 37 2729 1998.
ISSN: ISSN 0006-2960
PubMed: 9485423
DOI: 10.1021/BI972635P
Page generated: Sat Dec 12 03:16:55 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy