Calcium in PDB 1rk9: Solution Structure of Human Alpha-Parvalbumin (Minimized Average Structure)

The binding sites of Calcium atom in the Solution Structure of Human Alpha-Parvalbumin (Minimized Average Structure) (pdb code 1rk9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure of Human Alpha-Parvalbumin (Minimized Average Structure), PDB code: 1rk9:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Solution Structure of Human Alpha-Parvalbumin (Minimized Average Structure)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of Human Alpha-Parvalbumin (Minimized Average Structure) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca111 b:0.0 occ:1.00 OD2 A:ASP95 2.1 0.0 1.0 OE1 A:GLU102 2.1 0.0 1.0 HB3 A:ASP93 2.4 0.0 1.0 HB2 A:ASP93 2.8 0.0 1.0 CD A:GLU102 3.0 0.0 1.0 CB A:ASP93 3.0 0.0 1.0 OD2 A:ASP93 3.0 0.0 1.0 OD1 A:ASP91 3.0 0.0 1.0 O A:LYS97 3.1 0.0 1.0 OE2 A:GLU102 3.3 0.0 1.0 CG A:ASP95 3.3 0.0 1.0 HB2 A:ASP95 3.4 0.0 1.0 CG A:ASP93 3.5 0.0 1.0 H A:ASP95 3.9 0.0 1.0 H A:GLY99 3.9 0.0 1.0 CB A:ASP95 3.9 0.0 1.0 H A:ASP93 4.1 0.0 1.0 HA A:ASP91 4.2 0.0 1.0 HG2 A:GLU102 4.2 0.0 1.0 CG A:GLU102 4.2 0.0 1.0 CG A:ASP91 4.3 0.0 1.0 HA3 A:GLY99 4.3 0.0 1.0 C A:LYS97 4.3 0.0 1.0 OD1 A:ASP95 4.3 0.0 1.0 N A:GLY99 4.3 0.0 1.0 CA A:ASP93 4.4 0.0 1.0 H A:LYS97 4.4 0.0 1.0 N A:ASP93 4.6 0.0 1.0 N A:ASP95 4.7 0.0 1.0 HB3 A:ASP95 4.7 0.0 1.0 HA A:ILE98 4.7 0.0 1.0 H A:GLY94 4.8 0.0 1.0 OD1 A:ASP93 4.8 0.0 1.0 HB2 A:LYS97 4.8 0.0 1.0 HG3 A:GLU102 4.8 0.0 1.0 C A:ASP93 4.9 0.0 1.0 CA A:GLY99 4.9 0.0 1.0 CA A:ASP95 4.9 0.0 1.0 HD1 A:PHE58 4.9 0.0 1.0 C A:ILE98 5.0 0.0 1.0

Calcium binding site 2 out of 2 in the Solution Structure of Human Alpha-Parvalbumin (Minimized Average Structure)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of Human Alpha-Parvalbumin (Minimized Average Structure) within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca112 b:0.0 occ:1.00 OD2 A:ASP54 2.2 0.0 1.0 OD1 A:ASP54 2.4 0.0 1.0 OE1 A:GLU63 2.4 0.0 1.0 O A:PHE58 2.5 0.0 1.0 CG A:ASP54 2.7 0.0 1.0 OE2 A:GLU60 3.0 0.0 1.0 OD1 A:ASP52 3.0 0.0 1.0 OG A:SER56 3.0 0.0 1.0 CD A:GLU63 3.1 0.0 1.0 OE2 A:GLU63 3.3 0.0 1.0 HG A:SER56 3.4 0.0 1.0 HA A:ILE59 3.5 0.0 1.0 H A:PHE58 3.6 0.0 1.0 H A:SER56 3.6 0.0 1.0 C A:PHE58 3.7 0.0 1.0 HB3 A:SER56 4.0 0.0 1.0 CB A:SER56 4.0 0.0 1.0 H A:ASP54 4.0 0.0 1.0 HA A:ASP52 4.0 0.0 1.0 CG A:ASP52 4.0 0.0 1.0 H A:GLU60 4.1 0.0 1.0 CB A:ASP54 4.1 0.0 1.0 CD A:GLU60 4.2 0.0 1.0 HB2 A:PHE58 4.3 0.0 1.0 CA A:ILE59 4.4 0.0 1.0 CG A:GLU63 4.4 0.0 1.0 N A:PHE58 4.4 0.0 1.0 N A:SER56 4.4 0.0 1.0 HG2 A:GLU60 4.5 0.0 1.0 HG3 A:GLU63 4.5 0.0 1.0 HB3 A:ASP54 4.5 0.0 1.0 N A:ILE59 4.5 0.0 1.0 H A:GLY57 4.6 0.0 1.0 CA A:PHE58 4.6 0.0 1.0 CA A:SER56 4.7 0.0 1.0 OD2 A:ASP52 4.7 0.0 1.0 HB2 A:ASP54 4.8 0.0 1.0 N A:ASP54 4.8 0.0 1.0 N A:GLU60 4.8 0.0 1.0 HB2 A:GLU63 4.8 0.0 1.0 CA A:ASP52 4.9 0.0 1.0 HB2 A:SER56 4.9 0.0 1.0 CA A:ASP54 4.9 0.0 1.0 H A:LYS55 4.9 0.0 1.0 CG A:GLU60 4.9 0.0 1.0 CB A:PHE58 5.0 0.0 1.0 N A:GLY57 5.0 0.0 1.0 CB A:ASP52 5.0 0.0 1.0

I.Baig, I.Bertini, C.Del Bianco, Y.K.Gupta, Y.-M.Lee, C.Luchinat, A.Quattrone. Paramagnetism-Based Refinement Strategy For the Solution Structure of Human Alpha-Parvalbumin Biochemistry V. 43 5562 2004.
ISSN: ISSN 0006-2960
PubMed: 15122922
DOI: 10.1021/BI035879K