Atomistry » Calcium » PDB 1rc8-1rpk » 1rp1
Atomistry »
  Calcium »
    PDB 1rc8-1rpk »
      1rp1 »

Calcium in PDB 1rp1: Dog Pancreatic Lipase Related Protein 1

Enzymatic activity of Dog Pancreatic Lipase Related Protein 1

All present enzymatic activity of Dog Pancreatic Lipase Related Protein 1:
3.1.1.3;

Protein crystallography data

The structure of Dog Pancreatic Lipase Related Protein 1, PDB code: 1rp1 was solved by A.Roussel, C.Cambillau, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.00 / 2.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 54.026, 150.748, 132.006, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 25.6

Calcium Binding Sites:

The binding sites of Calcium atom in the Dog Pancreatic Lipase Related Protein 1 (pdb code 1rp1). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Dog Pancreatic Lipase Related Protein 1, PDB code: 1rp1:

Calcium binding site 1 out of 1 in 1rp1

Go back to Calcium Binding Sites List in 1rp1
Calcium binding site 1 out of 1 in the Dog Pancreatic Lipase Related Protein 1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Dog Pancreatic Lipase Related Protein 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:21.5
occ:1.00
O A:GLU187 2.2 30.8 1.0
O A:HOH722 2.3 22.9 1.0
O A:ARG190 2.3 24.7 1.0
OD1 A:ASP192 2.4 23.2 1.0
OD1 A:ASP195 2.5 22.3 1.0
OD2 A:ASP195 2.5 23.7 1.0
CG A:ASP195 2.9 25.0 1.0
C A:GLU187 3.4 30.1 1.0
C A:ARG190 3.4 24.0 1.0
CG A:ASP192 3.6 24.9 1.0
N A:ASP192 4.0 19.8 1.0
CA A:LEU191 4.1 23.9 1.0
N A:LEU191 4.2 24.6 1.0
C A:LEU191 4.3 22.3 1.0
N A:GLU188 4.3 29.3 1.0
N A:ARG190 4.3 25.4 1.0
CA A:GLU187 4.3 32.9 1.0
O A:GLY159 4.3 22.6 1.0
CB A:ASP195 4.4 21.8 1.0
CB A:ASP192 4.4 23.6 1.0
O A:HOH843 4.4 24.2 1.0
C A:GLU188 4.4 28.7 1.0
CA A:GLU188 4.4 31.0 1.0
CA A:ARG190 4.4 25.6 1.0
CB A:GLU187 4.5 34.1 1.0
O A:GLU188 4.5 27.5 1.0
OD2 A:ASP192 4.5 28.4 1.0
C A:GLY159 4.7 20.8 1.0
CA A:ASP192 4.8 21.8 1.0
CB A:SER163 4.8 29.4 1.0
OG1 A:THR194 4.8 21.5 1.0
CA A:GLY159 4.8 20.4 1.0
O A:ASP192 4.9 21.0 1.0
O A:HOH833 5.0 44.4 1.0
N A:VAL189 5.0 27.8 1.0

Reference:

A.Roussel, J.De Caro, S.Bezzine, L.Gastinel, A.De Caro, F.Carriere, S.Leydier, R.Verger, C.Cambillau. Reactivation of the Totally Inactive Pancreatic Lipase RP1 By Structure-Predicted Point Mutations. Proteins V. 32 523 1998.
ISSN: ISSN 0887-3585
PubMed: 9726421
DOI: 10.1002/(SICI)1097-0134(19980901)32:4<523::AID-PROT10>3.3.CO;2-9
Page generated: Thu Jul 11 22:14:48 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy