Atomistry » Calcium » PDB 1rpz-1s26 » 1s02
Atomistry »
  Calcium »
    PDB 1rpz-1s26 »
      1s02 »

Calcium in PDB 1s02: Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn'

Enzymatic activity of Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn'

All present enzymatic activity of Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn':
3.4.21.14;

Protein crystallography data

The structure of Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn', PDB code: 1s02 was solved by C.R.Erwin, B.L.Barnett, J.D.Oliver, J.F.Sullivan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.300, 72.900, 75.400, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn' (pdb code 1s02). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn', PDB code: 1s02:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 1s02

Go back to Calcium Binding Sites List in 1s02
Calcium binding site 1 out of 2 in the Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn'


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn' within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca276

b:3.8
occ:1.00
O A:ILE79 2.2 7.2 1.0
OE1 A:GLN2 2.2 8.7 1.0
O A:LEU75 2.3 8.0 1.0
O A:VAL81 2.3 7.5 1.0
OD1 A:ASP41 2.4 6.0 1.0
OD1 A:ASN77 2.4 7.5 1.0
OD2 A:ASP41 2.6 6.5 1.0
CG A:ASP41 2.9 6.2 1.0
CG A:ASN77 3.3 8.6 1.0
CD A:GLN2 3.4 9.4 1.0
C A:ILE79 3.4 8.7 1.0
C A:LEU75 3.5 8.0 1.0
C A:VAL81 3.5 7.1 1.0
N A:VAL81 3.8 7.6 1.0
ND2 A:ASN77 3.8 8.1 1.0
N A:ASN77 3.9 9.8 1.0
CG A:GLN2 3.9 9.5 1.0
C A:GLY80 4.1 7.6 1.0
CA A:VAL81 4.2 7.1 1.0
N A:GLY80 4.3 8.2 1.0
CB A:GLN2 4.3 10.4 1.0
CA A:LEU75 4.3 7.7 1.0
N A:ILE79 4.4 10.6 1.0
N A:LEU75 4.4 7.0 1.0
CB A:ASP41 4.4 6.5 1.0
CA A:GLY80 4.4 8.0 1.0
N A:ASN76 4.4 9.0 1.0
CA A:ILE79 4.4 9.2 1.0
CG1 A:ILE79 4.4 10.6 1.0
NE2 A:GLN2 4.5 9.3 1.0
N A:LEU82 4.6 6.6 1.0
CA A:ASN77 4.6 9.8 1.0
CB A:ASN77 4.6 9.1 1.0
CA A:ASN76 4.6 9.5 1.0
C A:ASN77 4.7 10.0 1.0
C A:ALA74 4.7 6.1 1.0
C A:ASN76 4.7 10.0 1.0
CB A:LEU75 4.7 7.7 1.0
O A:GLY80 4.8 7.6 1.0
O A:ASN77 4.8 10.4 1.0
CA A:LEU82 4.9 6.6 1.0
O A:ALA74 4.9 6.6 1.0

Calcium binding site 2 out of 2 in 1s02

Go back to Calcium Binding Sites List in 1s02
Calcium binding site 2 out of 2 in the Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn'


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn' within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca277

b:20.8
occ:0.60
O A:VAL174 2.5 8.2 1.0
O A:GLY169 2.9 12.1 1.0
O A:TYR171 2.9 6.7 1.0
OD2 A:ASP197 2.9 6.9 1.0
O A:HOH335 3.1 17.1 1.0
O A:GLU195 3.4 8.5 1.0
C A:VAL174 3.6 8.5 1.0
C A:TYR171 3.8 7.5 1.0
CG A:ASP197 3.9 7.2 1.0
CB A:ALA176 3.9 5.8 1.0
N A:ALA176 3.9 6.2 1.0
OD1 A:ASP197 4.1 8.1 1.0
C A:GLY169 4.1 11.5 1.0
NH2 A:ARG247 4.2 8.3 1.0
CA A:PRO172 4.3 7.3 1.0
O A:LYS170 4.4 10.0 1.0
O A:PRO172 4.4 7.6 1.0
N A:PRO172 4.4 7.2 1.0
C A:LYS170 4.4 10.3 1.0
CA A:VAL174 4.4 8.9 1.0
N A:VAL174 4.4 8.7 1.0
C A:PRO172 4.5 7.5 1.0
C A:GLU195 4.5 8.9 1.0
N A:ILE175 4.6 8.0 1.0
CA A:ALA176 4.6 5.9 1.0
CB A:GLU195 4.6 9.3 1.0
N A:TYR171 4.6 9.3 1.0
CB A:VAL174 4.6 8.9 1.0
CA A:ILE175 4.6 7.4 1.0
C A:ILE175 4.7 7.0 1.0
CA A:GLU195 4.8 8.9 1.0
CA A:LYS170 4.9 11.0 1.0
CA A:TYR171 4.9 8.2 1.0
N A:LYS170 4.9 11.2 1.0

Reference:

C.R.Erwin, B.L.Barnett, J.D.Oliver, J.F.Sullivan. Effects of Engineered Salt Bridges on the Stability of Subtilisin Bpn'. Protein Eng. V. 4 87 1990.
ISSN: ISSN 0269-2139
PubMed: 2127106
DOI: 10.1093/PROTEIN/4.1.87
Page generated: Sat Dec 12 03:18:17 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy