Calcium in PDB 1sw8: Solution Structure of the N-Terminal Domain of Human N60D Calmodulin Refined with Paramagnetism Based Strategy

The binding sites of Calcium atom in the Solution Structure of the N-Terminal Domain of Human N60D Calmodulin Refined with Paramagnetism Based Strategy (pdb code 1sw8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure of the N-Terminal Domain of Human N60D Calmodulin Refined with Paramagnetism Based Strategy, PDB code: 1sw8:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Solution Structure of the N-Terminal Domain of Human N60D Calmodulin Refined with Paramagnetism Based Strategy


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of the N-Terminal Domain of Human N60D Calmodulin Refined with Paramagnetism Based Strategy within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca80 b:1.2 occ:1.00 OD1 A:ASP22 1.0 4.0 1.0 CG A:ASP22 1.8 2.1 1.0 H A:ASP24 1.9 0.6 1.0 H A:GLY23 2.0 0.7 1.0 OD2 A:ASP22 2.3 2.4 1.0 OD1 A:ASP20 2.3 1.0 1.0 O A:THR26 2.4 0.5 1.0 OE2 A:GLU31 2.8 1.9 1.0 OD1 A:ASP24 2.8 1.2 1.0 N A:GLY23 2.8 0.7 1.0 OE1 A:GLU31 2.9 2.3 1.0 N A:ASP24 2.9 0.7 1.0 CD A:GLU31 3.1 1.0 1.0 H A:THR26 3.1 0.8 1.0 CG A:ASP20 3.2 0.7 1.0 CB A:ASP22 3.2 0.8 1.0 H A:GLY25 3.4 0.8 1.0 H A:ASP22 3.4 0.9 1.0 C A:THR26 3.5 0.4 1.0 CA A:GLY23 3.6 0.7 1.0 HA2 A:GLY23 3.6 0.7 1.0 C A:ASP22 3.7 0.7 1.0 HA A:ASP20 3.7 0.4 1.0 HB3 A:ASP24 3.7 1.3 1.0 C A:GLY23 3.7 0.7 1.0 N A:ASP22 3.7 0.8 1.0 CA A:ASP22 3.7 0.7 1.0 CG A:ASP24 3.7 1.3 1.0 HB3 A:ASP22 3.7 2.4 1.0 N A:THR26 3.7 0.4 1.0 OD2 A:ASP20 3.8 1.1 1.0 CA A:ASP24 3.8 0.7 1.0 N A:GLY25 3.8 0.4 1.0 HB2 A:ASP22 3.9 2.1 1.0 CB A:ASP24 3.9 0.8 1.0 HA A:ILE27 4.0 0.4 1.0 C A:ASP24 4.1 0.8 1.0 HD13 A:ILE27 4.2 1.7 1.0 CA A:THR26 4.2 0.4 1.0 CB A:ASP20 4.2 0.7 1.0 CA A:ASP20 4.2 0.4 1.0 H A:LYS21 4.3 0.8 1.0 C A:ASP20 4.4 0.5 1.0 HB A:THR26 4.4 1.3 1.0 N A:LYS21 4.4 0.6 1.0 H A:THR28 4.5 0.4 1.0 N A:ILE27 4.6 0.4 1.0 C A:GLY25 4.6 0.6 1.0 HA3 A:GLY23 4.6 0.8 1.0 C A:LYS21 4.6 0.8 1.0 HB3 A:ASP20 4.6 0.8 1.0 CG A:GLU31 4.6 1.0 1.0 HA A:ASP24 4.7 0.8 1.0 CA A:GLY25 4.8 0.5 1.0 O A:ASP22 4.8 0.8 1.0 HA A:ASP22 4.8 0.8 1.0 CA A:ILE27 4.8 0.4 1.0 HG13 A:ILE27 4.8 0.7 1.0 OD2 A:ASP24 4.9 2.3 1.0 CB A:THR26 4.9 0.5 1.0 O A:GLY23 4.9 0.8 1.0 HG1 A:THR28 4.9 1.4 1.0 HG2 A:GLU31 5.0 1.2 1.0

Calcium binding site 2 out of 2 in the Solution Structure of the N-Terminal Domain of Human N60D Calmodulin Refined with Paramagnetism Based Strategy


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of the N-Terminal Domain of Human N60D Calmodulin Refined with Paramagnetism Based Strategy within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca81 b:0.5 occ:1.00 OD2 A:ASP60 2.2 0.9 1.0 OD1 A:ASP56 2.2 0.6 1.0 O A:THR62 2.2 0.5 1.0 H A:THR62 2.5 1.1 1.0 HB A:THR62 2.6 0.7 1.0 C A:THR62 2.8 0.5 1.0 OD1 A:ASP58 2.8 1.4 1.0 OE1 A:GLU67 2.9 1.5 1.0 CG A:ASP60 2.9 1.0 1.0 OE2 A:GLU67 3.0 1.5 1.0 OD1 A:ASP60 3.0 2.8 1.0 N A:THR62 3.2 0.7 1.0 CA A:THR62 3.2 0.6 1.0 CD A:GLU67 3.3 0.4 1.0 CG A:ASP56 3.3 0.5 1.0 CB A:THR62 3.3 0.7 1.0 H A:GLY61 3.5 0.7 1.0 OD2 A:ASP64 3.6 3.1 1.0 HB2 A:ASP56 3.6 0.4 1.0 CG A:ASP58 3.6 0.9 1.0 HA A:ASP56 3.7 0.3 1.0 N A:ILE63 3.8 0.5 1.0 OD2 A:ASP58 3.8 2.1 1.0 CB A:ASP56 3.9 0.4 1.0 HA A:ILE63 4.0 0.5 1.0 HG1 A:THR62 4.2 1.4 1.0 HA A:THR62 4.3 0.6 1.0 OG1 A:THR62 4.3 0.8 1.0 N A:GLY61 4.3 0.6 1.0 CA A:ASP56 4.3 0.3 1.0 CA A:ILE63 4.3 0.4 1.0 O A:ILE63 4.3 0.7 1.0 HG23 A:THR62 4.3 1.6 1.0 CB A:ASP60 4.4 0.7 1.0 C A:GLY61 4.4 0.7 1.0 OD2 A:ASP56 4.4 0.8 1.0 CG A:ASP64 4.4 1.8 1.0 CG2 A:THR62 4.5 0.7 1.0 H A:GLY59 4.5 0.5 1.0 H A:ILE63 4.5 0.6 1.0 C A:ILE63 4.5 0.4 1.0 HB3 A:ASP60 4.6 1.4 1.0 OD1 A:ASP64 4.7 2.7 1.0 CG A:GLU67 4.8 0.4 1.0 H A:ALA57 4.9 0.5 1.0 CA A:GLY61 4.9 0.6 1.0 HB3 A:ASP56 4.9 0.5 1.0 H A:ASP60 5.0 0.6 1.0

I.Bertini, C.Del Bianco, I.Gelis, N.Katsaros, C.Luchinat, G.Parigi, M.Peana, A.Provenzani, M.A.Zoroddu. Experimentally Exploring the Conformational Space Sampled By Domain Reorientation in Calmodulin Proc.Natl.Acad.Sci.Usa V. 101 6841 2004.
ISSN: ISSN 0027-8424
PubMed: 15100408
DOI: 10.1073/PNAS.0308641101