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Calcium in PDB 1tgb: Crystal Structure of Bovine Trypsinogen at 1.8 Angstroms Resolution. II. Crystallographic Refinement, Refined Crystal Structure and Comparison with Bovine Trypsin

Protein crystallography data

The structure of Crystal Structure of Bovine Trypsinogen at 1.8 Angstroms Resolution. II. Crystallographic Refinement, Refined Crystal Structure and Comparison with Bovine Trypsin, PDB code: 1tgb was solved by W.Bode, H.Fehlhammer, R.Huber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.80
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 55.100, 55.100, 109.400, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Bovine Trypsinogen at 1.8 Angstroms Resolution. II. Crystallographic Refinement, Refined Crystal Structure and Comparison with Bovine Trypsin (pdb code 1tgb). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Bovine Trypsinogen at 1.8 Angstroms Resolution. II. Crystallographic Refinement, Refined Crystal Structure and Comparison with Bovine Trypsin, PDB code: 1tgb:

Calcium binding site 1 out of 1 in 1tgb

Go back to Calcium Binding Sites List in 1tgb
Calcium binding site 1 out of 1 in the Crystal Structure of Bovine Trypsinogen at 1.8 Angstroms Resolution. II. Crystallographic Refinement, Refined Crystal Structure and Comparison with Bovine Trypsin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Bovine Trypsinogen at 1.8 Angstroms Resolution. II. Crystallographic Refinement, Refined Crystal Structure and Comparison with Bovine Trypsin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca480

b:1.3
occ:0.63
OE2 A:GLU80 2.2 1.2 0.6
OE1 A:GLU70 2.3 1.3 0.6
O A:ASN72 2.4 1.2 0.6
O A:HOH714 2.4 1.3 0.3
O A:VAL75 2.4 1.1 0.6
O A:HOH711 2.7 1.3 0.6
CD A:GLU70 3.3 1.3 0.6
CD A:GLU80 3.3 1.2 0.6
C A:ASN72 3.5 1.2 0.6
C A:VAL75 3.5 1.2 0.6
OE2 A:GLU70 3.7 1.3 0.6
CG A:GLU80 3.9 1.3 0.6
N A:GLU77 4.1 1.4 0.5
CA A:VAL76 4.1 1.2 0.5
N A:VAL76 4.3 1.1 0.6
N A:ASN72 4.3 1.3 0.6
N A:ILE73 4.3 1.3 0.6
CA A:ILE73 4.3 1.3 0.6
CG A:GLU77 4.3 1.5 0.5
O A:HOH706 4.3 1.3 0.4
OE1 A:GLU80 4.3 1.2 0.6
CA A:ASN72 4.4 1.6 0.6
N A:VAL75 4.4 1.2 0.7
OE1 A:GLU77 4.4 1.3 0.5
N A:ASP71 4.5 1.2 0.6
CA A:VAL75 4.5 1.5 0.6
CG A:GLU70 4.6 1.2 0.6
C A:ILE73 4.6 1.3 0.6
C A:VAL76 4.6 1.4 0.5
CA A:GLU70 4.7 1.3 0.6
CB A:ASN72 4.8 1.3 0.6
CB A:GLU70 4.8 1.2 0.6
CB A:GLU77 4.8 1.2 0.5
CD A:GLU77 4.8 1.6 0.5
N A:ASN74 4.9 1.3 0.6
C A:ASP71 5.0 1.3 0.6
O A:HOH733 5.0 1.3 0.4

Reference:

H.Fehlhammer, W.Bode, R.Huber. Crystal Structure of Bovine Trypsinogen at 1-8 A Resolution. II. Crystallographic Refinement, Refined Crystal Structure and Comparison with Bovine Trypsin. J.Mol.Biol. V. 111 415 1977.
ISSN: ISSN 0022-2836
PubMed: 864704
DOI: 10.1016/S0022-2836(77)80062-4
Page generated: Thu Jul 11 23:02:15 2024

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