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Calcium in PDB 1tlq: Crystal Structure of Protein Ypjq From Bacillus Subtilis, Pfam DUF64

Protein crystallography data

The structure of Crystal Structure of Protein Ypjq From Bacillus Subtilis, Pfam DUF64, PDB code: 1tlq was solved by R.Kniewel, K.R.Rajashankar, V.Solorzano, C.D.Lima, S.K.Burley, New Yorksgx Research Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.40
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 118.112, 118.112, 65.792, 90.00, 90.00, 120.00
R / Rfree (%) 23.2 / 29.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Protein Ypjq From Bacillus Subtilis, Pfam DUF64 (pdb code 1tlq). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Protein Ypjq From Bacillus Subtilis, Pfam DUF64, PDB code: 1tlq:

Calcium binding site 1 out of 1 in 1tlq

Go back to Calcium Binding Sites List in 1tlq
Calcium binding site 1 out of 1 in the Crystal Structure of Protein Ypjq From Bacillus Subtilis, Pfam DUF64


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Protein Ypjq From Bacillus Subtilis, Pfam DUF64 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca190

b:33.5
occ:1.00
O A:HOH210 2.0 37.8 1.0
O A:HOH198 2.4 27.4 1.0
O A:TYR96 2.5 26.9 1.0
OD1 A:ASP99 2.5 25.6 1.0
OD2 A:ASP99 2.6 26.6 1.0
O A:HOH199 2.7 38.6 1.0
OE2 A:GLU100 2.7 28.1 1.0
OE1 A:GLU100 2.8 32.7 1.0
CG A:ASP99 2.9 29.6 1.0
CD A:GLU100 3.1 30.1 1.0
C A:TYR96 3.6 28.5 1.0
CA A:GLY97 4.0 29.1 1.0
OD1 A:ASP92 4.2 33.3 1.0
O A:HOH196 4.3 28.9 1.0
N A:GLY97 4.3 30.1 1.0
CB A:ASP99 4.3 24.4 1.0
O A:GLU93 4.4 40.7 1.0
CG A:GLU100 4.6 17.3 1.0
CD2 A:TYR96 4.7 28.0 1.0
CA A:TYR96 4.8 31.5 1.0
C A:GLY97 4.8 29.1 1.0
O A:HOH194 4.8 30.9 1.0
N A:GLU100 4.8 26.1 1.0
O A:PRO94 4.8 38.5 1.0
CB A:TYR96 5.0 30.8 1.0

Reference:

R.Kniewel, K.R.Rajashankar, V.Solorzano, C.D.Lima. Crystal Structure of A Hypothetical Protein From Bacillus Subtilis To Be Published.
Page generated: Sat Dec 12 03:21:30 2020

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