Calcium in PDB 1vly: Crystal Structure of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli at 1.30 A Resolution

The structure of Crystal Structure of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli at 1.30 A Resolution, PDB code: 1vly was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.45 / 1.30
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	44.814, 50.080, 52.014, 94.68, 115.29, 116.46
R / Rfree (%)	13.4 / 16.8

The structure of Crystal Structure of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli at 1.30 A Resolution also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Calcium atom in the Crystal Structure of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli at 1.30 A Resolution (pdb code 1vly). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli at 1.30 A Resolution, PDB code: 1vly:

Calcium binding site 1 out of 1 in the Crystal Structure of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli at 1.30 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Putative Aminomethyltransferase (Ygfz) From Escherichia Coli at 1.30 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca505 b:20.4 occ:1.00 O A:HOH832 2.2 38.0 1.0 O A:HOH655 2.3 25.1 1.0 O A:HOH585 2.3 20.4 1.0 O A:HOH587 2.4 20.9 1.0 O A:HOH752 2.4 29.9 1.0 OE2 A:GLU286 2.5 31.4 1.0 OE1 A:GLU286 2.6 28.0 1.0 O A:HOH875 2.6 38.4 1.0 CD A:GLU286 2.9 26.5 1.0 O A:HOH776 4.3 30.3 1.0 NH2 A:ARG9 4.4 23.7 1.0 CG A:GLU286 4.4 24.4 1.0 OG1 A:THR12 4.5 15.5 1.0 OE1 A:GLU182 4.6 15.9 1.0 OE2 A:GLU182 4.6 17.8 1.0 O A:HOH572 4.7 19.5 1.0 O A:HOH732 4.8 30.0 1.0 CG A:PRO18 4.9 17.1 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.