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Calcium in PDB 1w07: Arabidopsis Thaliana Acyl-Coa Oxidase 1

Enzymatic activity of Arabidopsis Thaliana Acyl-Coa Oxidase 1

All present enzymatic activity of Arabidopsis Thaliana Acyl-Coa Oxidase 1:
1.3.3.6;

Protein crystallography data

The structure of Arabidopsis Thaliana Acyl-Coa Oxidase 1, PDB code: 1w07 was solved by A.Henriksen, L.Pedersen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.59 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 85.201, 117.001, 131.047, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 24.9

Other elements in 1w07:

The structure of Arabidopsis Thaliana Acyl-Coa Oxidase 1 also contains other interesting chemical elements:

Platinum (Pt) 6 atoms
Chlorine (Cl) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Arabidopsis Thaliana Acyl-Coa Oxidase 1 (pdb code 1w07). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Arabidopsis Thaliana Acyl-Coa Oxidase 1, PDB code: 1w07:

Calcium binding site 1 out of 1 in 1w07

Go back to Calcium Binding Sites List in 1w07
Calcium binding site 1 out of 1 in the Arabidopsis Thaliana Acyl-Coa Oxidase 1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Arabidopsis Thaliana Acyl-Coa Oxidase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1661

b:20.7
occ:1.00
O A:HIS6 2.3 21.1 1.0
O A:HOH2014 2.5 23.9 1.0
OD2 A:ASP9 2.6 22.3 1.0
O A:HOH2016 2.6 21.2 1.0
O A:HOH2009 2.7 25.6 1.0
C A:HIS6 3.3 17.5 1.0
CG A:ASP9 3.4 21.8 1.0
OD1 A:ASP9 3.5 24.3 1.0
CA A:HIS6 4.0 18.4 1.0
CB A:HIS6 4.1 20.3 1.0
N A:LEU7 4.3 14.2 1.0
O A:HOH2189 4.6 39.9 1.0
CA A:LEU7 4.6 15.2 1.0
CB A:ASP9 4.7 19.4 1.0
O A:HOH2340 4.8 20.6 1.0
O A:HOH2010 4.8 20.8 1.0
O A:HOH2015 4.8 28.0 1.0

Reference:

L.Pedersen, A.Henriksen. Acyl-Coa Oxidase 1 From Arabidopsis Thaliana. Structure of A Key Enzyme in Plant Lipid Metabolism J.Mol.Biol. V. 345 487 2005.
ISSN: ISSN 0022-2836
PubMed: 15581893
DOI: 10.1016/J.JMB.2004.10.062
Page generated: Wed Oct 28 07:30:08 2020

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