Atomistry » Calcium » PDB 1wy9-1xjo » 1x8c
Atomistry »
  Calcium »
    PDB 1wy9-1xjo »
      1x8c »

Calcium in PDB 1x8c: Crystal Structure of the Semet-Derivative Copper Homeostasis Protein (Cutcm) with Calcium Binding From Shigella Flexneri 2A Str. 301

Protein crystallography data

The structure of Crystal Structure of the Semet-Derivative Copper Homeostasis Protein (Cutcm) with Calcium Binding From Shigella Flexneri 2A Str. 301, PDB code: 1x8c was solved by D.C.Wang, D.Y.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.26 / 2.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 74.579, 97.579, 131.846, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 22.2

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Semet-Derivative Copper Homeostasis Protein (Cutcm) with Calcium Binding From Shigella Flexneri 2A Str. 301 (pdb code 1x8c). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Semet-Derivative Copper Homeostasis Protein (Cutcm) with Calcium Binding From Shigella Flexneri 2A Str. 301, PDB code: 1x8c:

Calcium binding site 1 out of 1 in 1x8c

Go back to Calcium Binding Sites List in 1x8c
Calcium binding site 1 out of 1 in the Crystal Structure of the Semet-Derivative Copper Homeostasis Protein (Cutcm) with Calcium Binding From Shigella Flexneri 2A Str. 301


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Semet-Derivative Copper Homeostasis Protein (Cutcm) with Calcium Binding From Shigella Flexneri 2A Str. 301 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca501

b:26.9
occ:1.00
O B:HOH629 3.0 30.5 1.0
N B:TYR132 3.3 12.9 1.0
N B:LEU131 3.3 11.7 1.0
C B:ASN129 3.4 15.1 1.0
CA B:ASN129 3.4 13.8 1.0
CB B:LEU131 3.6 15.0 1.0
CB B:ASN129 3.6 12.6 1.0
N B:PRO130 3.7 15.8 1.0
O B:ASN129 3.8 12.5 1.0
CA B:LEU131 3.8 13.7 1.0
CB B:TYR132 3.9 12.2 1.0
CD B:PRO130 4.0 17.1 1.0
C B:LEU131 4.0 12.9 1.0
CG B:LEU131 4.2 19.5 1.0
CA B:TYR132 4.2 12.1 1.0
C B:PRO130 4.2 15.0 1.0
CA B:PRO130 4.5 15.7 1.0
CG B:ASN129 4.7 14.9 1.0
OD1 B:ASN129 4.8 15.0 1.0
CD1 B:LEU131 4.8 20.2 1.0
O B:HOH670 4.8 45.4 1.0
N B:ASN129 4.8 14.5 1.0
O B:HOH585 4.9 22.4 1.0

Reference:

D.Y.Zhu, Y.Q.Zhu, R.H.Huang, Y.Xiang, N.Yang, H.X.Lu, G.P.Li, Q.Jin, D.C.Wang. Crystal Structure of the Copper Homeostasis Protein (Cutcm) From Shigella Flexneri at 1.7 A Resolution: the First Structure of A New Sequence Family of Tim Barrels Proteins V. 58 764 2005.
ISSN: ISSN 0887-3585
PubMed: 15624211
DOI: 10.1002/PROT.20362
Page generated: Sat Dec 12 03:26:39 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy