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Calcium in PDB 1y3g: Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
Enzymatic activity of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
All present enzymatic activity of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin:
3.4.24.27;
3.4.24.27;
Protein crystallography data
The structure of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin, PDB code: 1y3g
was solved by
D.H.Juers,
J.Kim,
B.W.Matthews,
S.M.Sieburth,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 31.00 / 2.10 |
| Space group | P 61 2 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 93.520, 93.520, 131.770, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 15.5 / 22.5 |
Other elements in 1y3g:
The structure of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin also contains other interesting chemical elements:
| Silicon | (Si) | 1 atom |
| Zinc | (Zn) | 1 atom |
Calcium Binding Sites:
The binding sites of Calcium atom in the Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
(pdb code 1y3g). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin, PDB code: 1y3g:
Jump to Calcium binding site number: 1; 2; 3; 4;
In total 4 binding sites of Calcium where determined in the Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin, PDB code: 1y3g:
Jump to Calcium binding site number: 1; 2; 3; 4;
Calcium binding site 1 out of 4 in 1y3g
Go back to
Calcium Binding Sites List in 1y3g
Calcium binding site 1 out
of 4 in the Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin within 5.0Å range:
|
Calcium binding site 2 out of 4 in 1y3g
Go back to
Calcium Binding Sites List in 1y3g
Calcium binding site 2 out
of 4 in the Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin within 5.0Å range:
|
Calcium binding site 3 out of 4 in 1y3g
Go back to
Calcium Binding Sites List in 1y3g
Calcium binding site 3 out
of 4 in the Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin within 5.0Å range:
|
Calcium binding site 4 out of 4 in 1y3g
Go back to
Calcium Binding Sites List in 1y3g
Calcium binding site 4 out
of 4 in the Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Crystal Structure of A Silanediol Protease Inhibitor Bound to Thermolysin within 5.0Å range:
|
Reference:
D.H.Juers,
J.Kim,
B.W.Matthews,
S.M.Sieburth.
Structural Analysis of Silanediols As Transition-State-Analogue Inhibitors of the Benchmark Metalloprotease Thermolysin(,). Biochemistry V. 44 16524 2005.
ISSN: ISSN 0006-2960
PubMed: 16342943
DOI: 10.1021/BI051346V
Page generated: Fri Jul 12 07:57:35 2024
ISSN: ISSN 0006-2960
PubMed: 16342943
DOI: 10.1021/BI051346V
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