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Calcium in PDB 1yld: Trypsin/Bpti Complex Mutant

Enzymatic activity of Trypsin/Bpti Complex Mutant

All present enzymatic activity of Trypsin/Bpti Complex Mutant:
3.4.21.4;

Protein crystallography data

The structure of Trypsin/Bpti Complex Mutant, PDB code: 1yld was solved by C.K.Brown, D.H.Ohlendorf, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.25 / 1.70
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 92.591, 92.591, 62.258, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 21.7

Calcium Binding Sites:

The binding sites of Calcium atom in the Trypsin/Bpti Complex Mutant (pdb code 1yld). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Trypsin/Bpti Complex Mutant, PDB code: 1yld:

Calcium binding site 1 out of 1 in 1yld

Go back to Calcium Binding Sites List in 1yld
Calcium binding site 1 out of 1 in the Trypsin/Bpti Complex Mutant


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Trypsin/Bpti Complex Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca800

b:17.2
occ:1.00
OE1 A:GLU70 2.4 17.0 1.0
O A:ASN72 2.5 18.6 1.0
O A:VAL75 2.5 20.1 1.0
OE2 A:GLU80 2.6 20.8 1.0
O A:HOH526 2.6 21.4 1.0
OE1 A:GLU77 2.6 26.5 1.0
CD A:GLU77 3.4 27.8 1.0
CD A:GLU70 3.4 19.2 1.0
CD A:GLU80 3.5 20.9 1.0
C A:ASN72 3.6 18.1 1.0
C A:VAL75 3.6 20.8 1.0
CG A:GLU77 3.7 25.8 1.0
CG A:GLU80 3.8 18.6 1.0
OE2 A:GLU70 3.8 18.3 1.0
N A:GLU77 4.0 23.8 1.0
N A:ASN72 4.3 17.9 1.0
N A:VAL75 4.3 19.8 1.0
CB A:GLU77 4.3 27.3 1.0
CA A:LEU76 4.3 20.7 1.0
OE2 A:GLU77 4.4 27.6 1.0
N A:LEU76 4.4 19.2 1.0
CA A:ILE73 4.4 21.1 1.0
N A:ILE73 4.4 19.5 1.0
O A:HOH591 4.4 33.2 1.0
CA A:ASN72 4.5 17.5 1.0
CA A:VAL75 4.5 20.1 1.0
C A:ILE73 4.6 21.1 1.0
C A:LEU76 4.6 23.8 1.0
CB A:ASN72 4.7 18.5 1.0
N A:HIS71 4.7 18.4 1.0
OE1 A:GLU80 4.7 21.2 1.0
CG A:GLU70 4.7 16.6 1.0
CA A:GLU77 4.8 26.6 1.0
CA A:GLU70 4.9 17.6 1.0
O A:ILE73 4.9 20.4 1.0
N A:ASN74 4.9 19.1 1.0
CB A:GLU70 5.0 19.1 1.0

Reference:

I.V.Getun, C.K.Brown, J.Tulla-Puche, D.Ohlendorf, C.Woodward, G.Barany. Partially Folded Bovine Pancreatic Trypsin Inhibitor Analogues Attain Fully Native Structures When Co-Crystallized with S195A Rat Trypsin J.Mol.Biol. V. 375 812 2008.
ISSN: ISSN 0022-2836
PubMed: 18054043
DOI: 10.1016/J.JMB.2007.10.084
Page generated: Sat Dec 12 03:28:53 2020

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