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Calcium in PDB 1zzz: Trypsin Inhibitors with Rigid Tripeptidyl Aldehydes

Protein crystallography data

The structure of Trypsin Inhibitors with Rigid Tripeptidyl Aldehydes, PDB code: 1zzz was solved by R.Krishnan, E.Zhang, K.Hakansson, R.K.Arni, A.Tulinsky, M.S.L.Lim-Wilby, O.E.Levy, J.E.Semple, T.K.Brunck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.670, 63.200, 69.220, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the Trypsin Inhibitors with Rigid Tripeptidyl Aldehydes (pdb code 1zzz). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Trypsin Inhibitors with Rigid Tripeptidyl Aldehydes, PDB code: 1zzz:

Calcium binding site 1 out of 1 in 1zzz

Go back to Calcium Binding Sites List in 1zzz
Calcium binding site 1 out of 1 in the Trypsin Inhibitors with Rigid Tripeptidyl Aldehydes


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Trypsin Inhibitors with Rigid Tripeptidyl Aldehydes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca701

b:11.7
occ:0.75
OE1 A:GLU70 2.2 18.9 1.0
O A:VAL75 2.3 14.3 1.0
O A:ASN72 2.4 13.4 1.0
O A:HOH409 2.5 9.6 0.9
O A:HOH574 2.6 13.2 0.7
OE2 A:GLU80 2.6 10.7 1.0
CD A:GLU70 3.3 16.7 1.0
C A:VAL75 3.4 12.1 1.0
CD A:GLU80 3.6 14.9 1.0
C A:ASN72 3.7 13.8 1.0
CG A:GLU80 3.7 13.8 1.0
OE2 A:GLU70 3.8 15.4 1.0
CA A:VAL76 4.1 15.9 1.0
N A:VAL76 4.2 12.9 1.0
OE1 A:GLU77 4.2 19.9 1.0
N A:GLU77 4.2 14.8 1.0
N A:VAL75 4.2 13.1 1.0
CA A:ILE73 4.3 12.6 1.0
CG A:GLU77 4.3 19.2 1.0
N A:ASN72 4.4 12.6 1.0
O A:HOH401 4.4 9.4 0.9
CA A:VAL75 4.5 13.3 1.0
N A:ILE73 4.5 13.4 1.0
CA A:ASN72 4.5 12.3 1.0
C A:ILE73 4.6 12.2 1.0
O A:HOH498 4.6 16.3 0.8
C A:VAL76 4.6 16.4 1.0
N A:ASP71 4.6 12.7 1.0
CG A:GLU70 4.6 12.4 1.0
CD A:GLU77 4.7 21.1 1.0
OE1 A:GLU80 4.7 13.4 1.0
CA A:GLU70 4.8 12.7 1.0
CB A:GLU77 4.8 15.2 1.0
N A:ASN74 4.8 12.3 1.0
CB A:ASN72 4.9 9.9 1.0
CB A:GLU70 4.9 13.7 1.0

Reference:

R.Krishnan, E.Zhang, K.Hakansson, R.K.Arni, A.Tulinsky, M.S.Lim-Wilby, O.E.Levy, J.E.Semple, T.K.Brunck. Highly Selective Mechanism-Based Thrombin Inhibitors: Structures of Thrombin and Trypsin Inhibited with Rigid Peptidyl Aldehydes. Biochemistry V. 37 12094 1998.
ISSN: ISSN 0006-2960
PubMed: 9724521
DOI: 10.1021/BI980840E
Page generated: Sat Dec 12 03:30:29 2020

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