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Calcium in PDB 2ctv: High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot)

Protein crystallography data

The structure of High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot), PDB code: 2ctv was solved by S.Weisgerber, J.R.Helliwell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.95
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 88.700, 86.500, 62.500, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / n/a

Other elements in 2ctv:

The structure of High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot) also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot) (pdb code 2ctv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot), PDB code: 2ctv:

Calcium binding site 1 out of 1 in 2ctv

Go back to Calcium Binding Sites List in 2ctv
Calcium binding site 1 out of 1 in the High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca239

b:12.5
occ:1.00
O A:TYR12 2.3 12.9 1.0
OD1 A:ASP10 2.3 12.6 1.0
OD2 A:ASP19 2.4 12.1 1.0
O A:HOH273 2.4 14.4 1.0
O A:HOH311 2.4 8.0 1.0
OD2 A:ASP10 2.5 10.5 1.0
OD1 A:ASN14 2.6 14.6 1.0
CG A:ASP10 2.8 11.4 1.0
CG A:ASP19 3.5 9.9 1.0
C A:TYR12 3.5 10.8 1.0
CG A:ASN14 3.6 20.8 1.0
OD1 A:ASP19 3.9 11.8 1.0
N A:ASN14 4.0 9.4 1.0
CB A:ASN14 4.1 14.3 1.0
MN A:MN238 4.2 14.3 1.0
CB A:ASP10 4.3 10.9 1.0
CA A:TYR12 4.3 12.4 1.0
N A:TYR12 4.4 11.6 1.0
CB A:TYR12 4.4 7.6 1.0
O A:HOH241 4.5 10.2 1.0
N A:PRO13 4.5 17.2 1.0
O A:ASP208 4.6 9.2 1.0
CA A:ASN14 4.7 12.1 1.0
CA A:PRO13 4.7 11.0 1.0
CB A:ASP19 4.7 5.9 1.0
CE1 A:HIS24 4.7 10.3 1.0
OD1 A:ASP208 4.7 12.3 1.0
C A:PRO13 4.7 19.2 1.0
ND2 A:ASN14 4.7 8.1 1.0
CB A:ARG228 4.9 4.7 1.0
O A:ARG228 4.9 13.5 1.0
NE2 A:HIS24 5.0 8.8 1.0
CA A:ARG228 5.0 6.8 1.0

Reference:

S.Weisgerber, J.R.Helliwell. High Resolution Crystallographic Studies of Native Concanavalin A Using Rapid Laue Data Collection Methods and the Introduction of A Monochromatic Large-Angle Oscillation Technique (Lot) J.Chem.Soc.,Faraday Trans. V. 89 2667 1993.
ISSN: ISSN 0956-5000
Page generated: Tue Jul 8 04:54:39 2025

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