Calcium in PDB 2e30: Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1
Calcium Binding Sites:
The binding sites of Calcium atom in the Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1
(pdb code 2e30). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1, PDB code: 2e30:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 2e30
Go back to
Calcium Binding Sites List in 2e30
Calcium binding site 1 out
of 2 in the Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca300
b:0.0
occ:1.00
|
OD1
|
A:ASP127
|
2.4
|
0.0
|
1.0
|
OE1
|
A:GLU134
|
2.4
|
0.0
|
1.0
|
H
|
A:ASP127
|
2.5
|
0.0
|
1.0
|
O
|
A:LYS129
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP123
|
2.6
|
0.0
|
1.0
|
HA
|
A:ASP123
|
2.6
|
0.0
|
1.0
|
OE2
|
A:GLU134
|
2.7
|
0.0
|
1.0
|
CD
|
A:GLU134
|
2.9
|
0.0
|
1.0
|
H
|
A:LYS126
|
3.0
|
0.0
|
1.0
|
H
|
A:SER131
|
3.2
|
0.0
|
1.0
|
H
|
A:ASP125
|
3.2
|
0.0
|
1.0
|
HA
|
A:ILE130
|
3.2
|
0.0
|
1.0
|
OD2
|
A:ASP125
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASP127
|
3.4
|
0.0
|
1.0
|
N
|
A:ASP127
|
3.4
|
0.0
|
1.0
|
H
|
A:LEU124
|
3.5
|
0.0
|
1.0
|
C
|
A:LYS129
|
3.6
|
0.0
|
1.0
|
H
|
A:LYS129
|
3.6
|
0.0
|
1.0
|
N
|
A:LYS126
|
3.6
|
0.0
|
1.0
|
CA
|
A:ASP123
|
3.6
|
0.0
|
1.0
|
HB2
|
A:ASP127
|
3.7
|
0.0
|
1.0
|
CG
|
A:ASP123
|
3.7
|
0.0
|
1.0
|
CG
|
A:ASP125
|
3.7
|
0.0
|
1.0
|
H
|
A:GLU128
|
3.8
|
0.0
|
1.0
|
N
|
A:ASP125
|
3.9
|
0.0
|
1.0
|
CB
|
A:ASP127
|
4.0
|
0.0
|
1.0
|
N
|
A:LEU124
|
4.0
|
0.0
|
1.0
|
HE1
|
A:PHE119
|
4.0
|
0.0
|
1.0
|
N
|
A:SER131
|
4.0
|
0.0
|
1.0
|
O
|
A:TYR122
|
4.0
|
0.0
|
1.0
|
C
|
A:ASP123
|
4.1
|
0.0
|
1.0
|
CA
|
A:ILE130
|
4.1
|
0.0
|
1.0
|
HA
|
A:LYS126
|
4.1
|
0.0
|
1.0
|
HB2
|
A:SER131
|
4.1
|
0.0
|
1.0
|
N
|
A:LYS129
|
4.2
|
0.0
|
1.0
|
OD1
|
A:ASP125
|
4.2
|
0.0
|
1.0
|
CA
|
A:ASP127
|
4.2
|
0.0
|
1.0
|
HD13
|
A:ILE130
|
4.2
|
0.0
|
1.0
|
N
|
A:ILE130
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP123
|
4.3
|
0.0
|
1.0
|
CA
|
A:LYS126
|
4.3
|
0.0
|
1.0
|
HB2
|
A:ASP125
|
4.3
|
0.0
|
1.0
|
C
|
A:LYS126
|
4.3
|
0.0
|
1.0
|
C
|
A:ASP125
|
4.3
|
0.0
|
1.0
|
OD2
|
A:ASP127
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASP125
|
4.4
|
0.0
|
1.0
|
CG
|
A:GLU134
|
4.4
|
0.0
|
1.0
|
N
|
A:GLU128
|
4.4
|
0.0
|
1.0
|
CA
|
A:ASP125
|
4.4
|
0.0
|
1.0
|
HD11
|
A:ILE130
|
4.5
|
0.0
|
1.0
|
CA
|
A:LYS129
|
4.5
|
0.0
|
1.0
|
C
|
A:ILE130
|
4.6
|
0.0
|
1.0
|
N
|
A:ASP123
|
4.7
|
0.0
|
1.0
|
HB2
|
A:ASP123
|
4.7
|
0.0
|
1.0
|
C
|
A:ASP127
|
4.7
|
0.0
|
1.0
|
HG3
|
A:GLU134
|
4.7
|
0.0
|
1.0
|
OD2
|
A:ASP123
|
4.7
|
0.0
|
1.0
|
C
|
A:TYR122
|
4.8
|
0.0
|
1.0
|
HG22
|
A:ILE130
|
4.8
|
0.0
|
1.0
|
C
|
A:LEU124
|
4.8
|
0.0
|
1.0
|
CD1
|
A:ILE130
|
4.9
|
0.0
|
1.0
|
HB3
|
A:SER131
|
4.9
|
0.0
|
1.0
|
CB
|
A:SER131
|
4.9
|
0.0
|
1.0
|
HB2
|
A:GLU134
|
4.9
|
0.0
|
1.0
|
HG2
|
A:GLU134
|
4.9
|
0.0
|
1.0
|
CE1
|
A:PHE119
|
4.9
|
0.0
|
1.0
|
O
|
A:ASP123
|
5.0
|
0.0
|
1.0
|
HB3
|
A:ASP127
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 2e30
Go back to
Calcium Binding Sites List in 2e30
Calcium binding site 2 out
of 2 in the Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca301
b:0.0
occ:1.00
|
H
|
A:ASP166
|
1.7
|
0.0
|
1.0
|
HG13
|
A:ILE171
|
2.2
|
0.0
|
1.0
|
H
|
A:GLN165
|
2.2
|
0.0
|
1.0
|
OD1
|
A:ASP168
|
2.5
|
0.0
|
1.0
|
OE2
|
A:GLU175
|
2.5
|
0.0
|
1.0
|
O
|
A:ALA170
|
2.5
|
0.0
|
1.0
|
HB2
|
A:ASP166
|
2.5
|
0.0
|
1.0
|
N
|
A:ASP166
|
2.6
|
0.0
|
1.0
|
HA
|
A:ASP164
|
2.7
|
0.0
|
1.0
|
N
|
A:GLN165
|
2.9
|
0.0
|
1.0
|
H
|
A:GLY167
|
3.0
|
0.0
|
1.0
|
OD1
|
A:ASP164
|
3.0
|
0.0
|
1.0
|
CD
|
A:GLU175
|
3.2
|
0.0
|
1.0
|
OE1
|
A:GLU175
|
3.2
|
0.0
|
1.0
|
CG1
|
A:ILE171
|
3.2
|
0.0
|
1.0
|
HA
|
A:ILE171
|
3.3
|
0.0
|
1.0
|
H
|
A:ASP168
|
3.3
|
0.0
|
1.0
|
CB
|
A:ASP166
|
3.3
|
0.0
|
1.0
|
CA
|
A:ASP166
|
3.5
|
0.0
|
1.0
|
CG
|
A:ASP168
|
3.5
|
0.0
|
1.0
|
C
|
A:ASP164
|
3.6
|
0.0
|
1.0
|
C
|
A:GLN165
|
3.6
|
0.0
|
1.0
|
CA
|
A:ASP164
|
3.6
|
0.0
|
1.0
|
HG12
|
A:ILE171
|
3.6
|
0.0
|
1.0
|
C
|
A:ALA170
|
3.6
|
0.0
|
1.0
|
H
|
A:ALA170
|
3.6
|
0.0
|
1.0
|
N
|
A:GLY167
|
3.7
|
0.0
|
1.0
|
HD12
|
A:ILE171
|
3.7
|
0.0
|
1.0
|
CA
|
A:GLN165
|
3.7
|
0.0
|
1.0
|
HB3
|
A:GLN165
|
3.8
|
0.0
|
1.0
|
OD2
|
A:ASP168
|
3.9
|
0.0
|
1.0
|
CG
|
A:ASP166
|
3.9
|
0.0
|
1.0
|
HG21
|
A:ILE171
|
3.9
|
0.0
|
1.0
|
C
|
A:ASP166
|
4.0
|
0.0
|
1.0
|
OD2
|
A:ASP166
|
4.0
|
0.0
|
1.0
|
CA
|
A:ILE171
|
4.0
|
0.0
|
1.0
|
CD1
|
A:ILE171
|
4.0
|
0.0
|
1.0
|
HB
|
A:THR174
|
4.1
|
0.0
|
1.0
|
O
|
A:ALA163
|
4.1
|
0.0
|
1.0
|
CG
|
A:ASP164
|
4.1
|
0.0
|
1.0
|
CB
|
A:ILE171
|
4.1
|
0.0
|
1.0
|
HB3
|
A:ASP166
|
4.2
|
0.0
|
1.0
|
CB
|
A:GLN165
|
4.2
|
0.0
|
1.0
|
N
|
A:ASP168
|
4.3
|
0.0
|
1.0
|
N
|
A:ILE171
|
4.3
|
0.0
|
1.0
|
N
|
A:ALA170
|
4.4
|
0.0
|
1.0
|
HA
|
A:ASP166
|
4.4
|
0.0
|
1.0
|
HB2
|
A:GLN165
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASP164
|
4.5
|
0.0
|
1.0
|
CG2
|
A:ILE171
|
4.6
|
0.0
|
1.0
|
CG
|
A:GLU175
|
4.6
|
0.0
|
1.0
|
O
|
A:ASP164
|
4.6
|
0.0
|
1.0
|
HD13
|
A:ILE171
|
4.6
|
0.0
|
1.0
|
H
|
A:SER169
|
4.6
|
0.0
|
1.0
|
H
|
A:GLU175
|
4.6
|
0.0
|
1.0
|
HD3
|
A:LYS129
|
4.6
|
0.0
|
1.0
|
N
|
A:ASP164
|
4.6
|
0.0
|
1.0
|
O
|
A:GLN165
|
4.7
|
0.0
|
1.0
|
HA
|
A:GLN165
|
4.7
|
0.0
|
1.0
|
CA
|
A:ALA170
|
4.7
|
0.0
|
1.0
|
C
|
A:ALA163
|
4.8
|
0.0
|
1.0
|
CA
|
A:GLY167
|
4.8
|
0.0
|
1.0
|
OD1
|
A:ASP166
|
4.8
|
0.0
|
1.0
|
HG3
|
A:GLU175
|
4.8
|
0.0
|
1.0
|
CB
|
A:ASP168
|
4.9
|
0.0
|
1.0
|
HD11
|
A:ILE171
|
4.9
|
0.0
|
1.0
|
HG21
|
A:THR174
|
4.9
|
0.0
|
1.0
|
HA2
|
A:GLY167
|
4.9
|
0.0
|
1.0
|
HZ3
|
A:LYS129
|
4.9
|
0.0
|
1.0
|
N
|
A:SER169
|
5.0
|
0.0
|
1.0
|
HG22
|
A:THR174
|
5.0
|
0.0
|
1.0
|
HG23
|
A:ILE171
|
5.0
|
0.0
|
1.0
|
HG2
|
A:GLU175
|
5.0
|
0.0
|
1.0
|
|
Reference:
M.Mishima,
S.Wakabayashi,
C.Kojima.
Solution Structure of the Cytoplasmic Region of Na+/H+ Exchanger 1 Complexed with Essential Cofactor Calcineurin B Homologous Protein 1 J.Biol.Chem. V. 282 2741 2007.
ISSN: ISSN 0021-9258
PubMed: 17050540
DOI: 10.1074/JBC.M604092200
Page generated: Fri Jul 12 10:01:58 2024
|