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Calcium in PDB 2ess: Crystal Structure of An Acyl-Acp Thioesterase (NP_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.90 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Acyl-Acp Thioesterase (NP_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.90 A Resolution, PDB code: 2ess was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.90
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 91.150, 91.150, 64.770, 90.00, 90.00, 120.00
R / Rfree (%) 16.6 / 20.6

Other elements in 2ess:

The structure of Crystal Structure of An Acyl-Acp Thioesterase (NP_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.90 A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of An Acyl-Acp Thioesterase (NP_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.90 A Resolution (pdb code 2ess). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of An Acyl-Acp Thioesterase (NP_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.90 A Resolution, PDB code: 2ess:

Calcium binding site 1 out of 1 in 2ess

Go back to Calcium Binding Sites List in 2ess
Calcium binding site 1 out of 1 in the Crystal Structure of An Acyl-Acp Thioesterase (NP_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An Acyl-Acp Thioesterase (NP_810988.1) From Bacteroides Thetaiotaomicron Vpi-5482 at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca248

b:69.5
occ:1.00
OD2 A:ASP170 1.9 61.1 1.0
O A:HOH381 2.2 36.5 1.0
NE2 A:HIS174 2.3 41.8 0.5
CD2 A:HIS174 3.0 36.6 0.5
CG A:ASP170 3.1 42.1 1.0
CE1 A:HIS174 3.5 43.2 0.5
OD1 A:ASP170 3.8 42.8 1.0
CB A:ASP170 4.1 37.9 1.0
OD1 A:ASN172 4.1 57.8 1.0
CG A:HIS174 4.2 37.2 0.5
C1 A:MPD255 4.4 69.9 1.0
ND1 A:HIS174 4.4 40.7 0.5
CB A:ASN176 4.6 38.9 1.0
CA A:ASN176 4.6 38.0 1.0
CD2 A:HIS174 4.8 36.9 0.5
CB A:HIS174 4.8 35.9 0.5

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Dec 12 03:36:37 2020

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