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Calcium in PDB 2fe1: Crystal Structure of PAE0151 From Pyrobaculum Aerophilum

Protein crystallography data

The structure of Crystal Structure of PAE0151 From Pyrobaculum Aerophilum, PDB code: 2fe1 was solved by R.D.Bunker, E.N.Baker, V.L.Arcus, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.63 / 2.20
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 72.343, 72.343, 96.803, 90.00, 90.00, 120.00
R / Rfree (%) 17.4 / 22.9

Other elements in 2fe1:

The structure of Crystal Structure of PAE0151 From Pyrobaculum Aerophilum also contains other interesting chemical elements:

Manganese (Mn) 1 atom
Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of PAE0151 From Pyrobaculum Aerophilum (pdb code 2fe1). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of PAE0151 From Pyrobaculum Aerophilum, PDB code: 2fe1:

Calcium binding site 1 out of 1 in 2fe1

Go back to Calcium Binding Sites List in 2fe1
Calcium binding site 1 out of 1 in the Crystal Structure of PAE0151 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of PAE0151 From Pyrobaculum Aerophilum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:59.7
occ:0.50
O A:HOH380 2.4 41.5 0.5
O A:HOH381 2.4 48.0 1.0
OD1 A:ASP86 2.6 17.2 1.0
OD2 A:ASP86 2.8 27.1 1.0
CG A:ASP86 3.1 21.9 1.0
O A:HOH336 4.5 34.0 1.0
O A:HOH315 4.5 30.4 1.0
CB A:ASP86 4.6 19.2 1.0
O A:HOH307 4.7 19.4 1.0
O A:HOH313 5.0 25.0 1.0

Reference:

R.D.Bunker, J.L.Mckenzie, E.N.Baker, V.L.Arcus. Crystal Structure of PAE0151 From Pyrobaculum Aerophilum, A Pin-Domain (Vapc) Protein From A Toxin-Antitoxin Operon. Proteins V. 72 510 2008.
ISSN: ISSN 0887-3585
PubMed: 18398909
DOI: 10.1002/PROT.22048
Page generated: Sat Dec 12 03:36:58 2020

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