Atomistry » Calcium » PDB 2fod-2g81 » 2fx6
Atomistry »
  Calcium »
    PDB 2fod-2g81 »
      2fx6 »

Calcium in PDB 2fx6: Bovine Trypsin Complexed with 2-Aminobenzamidazole

Enzymatic activity of Bovine Trypsin Complexed with 2-Aminobenzamidazole

All present enzymatic activity of Bovine Trypsin Complexed with 2-Aminobenzamidazole:
3.4.21.4;

Protein crystallography data

The structure of Bovine Trypsin Complexed with 2-Aminobenzamidazole, PDB code: 2fx6 was solved by B.A.Katz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 1.57
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.710, 63.200, 69.500, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 21.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Bovine Trypsin Complexed with 2-Aminobenzamidazole (pdb code 2fx6). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Bovine Trypsin Complexed with 2-Aminobenzamidazole, PDB code: 2fx6:

Calcium binding site 1 out of 1 in 2fx6

Go back to Calcium Binding Sites List in 2fx6
Calcium binding site 1 out of 1 in the Bovine Trypsin Complexed with 2-Aminobenzamidazole


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Bovine Trypsin Complexed with 2-Aminobenzamidazole within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca247

b:27.1
occ:1.00
O A:VAL75 2.2 14.3 1.0
O A:ASN72 2.2 12.1 1.0
O A:HOH560 2.3 16.6 1.0
O A:HOH248 2.3 14.8 1.0
OE2 A:GLU70 2.3 14.6 1.0
OE2 A:GLU80 2.4 15.2 1.0
CD A:GLU70 3.3 17.3 1.0
C A:VAL75 3.3 17.0 1.0
C A:ASN72 3.4 15.6 1.0
CD A:GLU80 3.5 16.4 1.0
OE1 A:GLU70 3.6 16.6 1.0
CG A:GLU80 3.9 16.6 1.0
CA A:VAL76 4.0 17.7 1.0
N A:VAL76 4.0 15.6 1.0
N A:VAL75 4.0 16.9 1.0
CA A:ILE73 4.1 16.0 1.0
N A:GLU77 4.1 17.9 1.0
N A:ILE73 4.2 15.3 1.0
CA A:VAL75 4.2 17.8 1.0
N A:ASN72 4.3 14.8 1.0
OE2 A:GLU77 4.3 18.4 1.0
CA A:ASN72 4.3 15.2 1.0
O A:HOH381 4.3 15.0 1.0
C A:ILE73 4.4 15.0 1.0
CG A:GLU77 4.5 19.4 1.0
CB A:ASN72 4.5 16.4 1.0
OE1 A:GLU80 4.5 16.6 1.0
C A:VAL76 4.6 20.3 1.0
N A:ASP71 4.6 15.6 1.0
CG A:GLU70 4.6 14.3 1.0
N A:ASN74 4.7 14.6 1.0
CB A:GLU70 4.8 15.0 1.0
O A:ILE73 4.8 15.3 1.0
CA A:GLU70 4.8 13.0 1.0
CB A:VAL75 4.8 17.5 1.0
CD A:GLU77 4.9 21.1 1.0
CB A:GLU77 4.9 19.2 1.0
C A:ASP71 5.0 17.4 1.0

Reference:

M.E.Mcgrath, P.A.Sprengeler, B.Hirschbein, J.R.Somoza, I.Lehoux, J.W.Janc, E.Gjerstad, M.Graupe, A.Estiarte, C.Venkataramani, Y.Liu, R.Yee, J.D.Ho, M.J.Green, C.-S.Lee, L.Liu, V.Tai, J.Spencer, D.Sperandio, B.A.Katz. Structure-Guided Design of Peptide-Based Tryptase Inhibitors. Biochemistry V. 45 5964 2006.
ISSN: ISSN 0006-2960
PubMed: 16681368
DOI: 10.1021/BI060173M
Page generated: Fri Jul 12 10:38:13 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy