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Calcium in PDB 2fzv: Crystal Structure of An Apo Form of A Flavin-Binding Protein From Shigella Flexneri

Protein crystallography data

The structure of Crystal Structure of An Apo Form of A Flavin-Binding Protein From Shigella Flexneri, PDB code: 2fzv was solved by I.I.Vorontsov, G.Minasov, J.S.Brunzelle, L.Shuvalova, F.R.Collart, A.Joachimiak, W.F.Anderson, Midwest Center For Structural Genomics(Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.81 / 1.70
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 117.821, 117.821, 154.080, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 24.6

Other elements in 2fzv:

The structure of Crystal Structure of An Apo Form of A Flavin-Binding Protein From Shigella Flexneri also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of An Apo Form of A Flavin-Binding Protein From Shigella Flexneri (pdb code 2fzv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of An Apo Form of A Flavin-Binding Protein From Shigella Flexneri, PDB code: 2fzv:

Calcium binding site 1 out of 1 in 2fzv

Go back to Calcium Binding Sites List in 2fzv
Calcium binding site 1 out of 1 in the Crystal Structure of An Apo Form of A Flavin-Binding Protein From Shigella Flexneri


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An Apo Form of A Flavin-Binding Protein From Shigella Flexneri within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca256

b:9.0
occ:0.50
OD1 A:ASP10 2.1 20.4 0.5
O A:HOH289 2.5 12.0 1.0
O A:HOH609 2.7 17.4 0.5
CG A:ASP10 3.0 21.9 0.5
O A:HOH359 3.1 24.7 1.0
OD2 A:ASP10 3.3 22.1 0.5
CB A:ASP10 4.3 21.0 0.5
CB A:ASP10 4.4 20.5 0.5
O A:HOH409 4.5 21.7 1.0
NE2 A:GLN62 4.7 18.7 1.0
O A:HOH300 4.8 13.0 1.0
CG A:PRO9 4.8 21.0 1.0
O A:HOH312 4.9 11.9 1.0
N A:ASP10 4.9 21.6 0.5
CB A:PRO9 4.9 23.5 1.0
CA A:ASP10 4.9 20.9 0.5
CG A:ASP10 4.9 21.5 0.5
N A:ASP10 5.0 21.3 0.5
CA A:ASP10 5.0 21.1 0.5

Reference:

I.I.Vorontsov, G.Minasov, J.S.Brunzelle, L.Shuvalova, O.Kiryukhina, F.R.Collart, W.F.Anderson. Crystal Structure of An Apo Form of Shigella Flexneri Arsh Protein with An Nadph-Dependent Fmn Reductase Activity Protein Sci. V. 16 2483 2007.
ISSN: ISSN 0961-8368
PubMed: 17962405
DOI: 10.1110/PS.073029607
Page generated: Fri Jul 12 10:39:50 2024

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