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Calcium in PDB 2gwj: Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form

Protein crystallography data

The structure of Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form, PDB code: 2gwj was solved by C.E.Stebbins, S.M.Margarit, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 83.33 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 96.361, 96.361, 97.410, 90.00, 90.00, 120.00
R / Rfree (%) 15.2 / 18.4

Calcium Binding Sites:

The binding sites of Calcium atom in the Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form (pdb code 2gwj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form, PDB code: 2gwj:

Calcium binding site 1 out of 1 in 2gwj

Go back to Calcium Binding Sites List in 2gwj
Calcium binding site 1 out of 1 in the Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1401

b:24.8
occ:1.00
O2B A:ATP1380 2.3 25.2 1.0
O A:HOH1422 2.4 11.1 1.0
O A:HOH1412 2.4 15.8 1.0
O A:HOH1403 2.4 12.8 1.0
O3G A:ATP1380 2.4 23.1 1.0
O A:HOH1419 2.5 13.5 1.0
O A:HOH1406 2.5 11.8 1.0
PG A:ATP1380 3.6 24.5 1.0
PB A:ATP1380 3.6 25.8 1.0
O3B A:ATP1380 3.9 25.1 1.0
O1G A:ATP1380 3.9 23.4 1.0
O A:HOH1418 4.2 16.7 1.0
O3A A:ATP1380 4.2 25.6 1.0
OE1 A:GLN137 4.3 24.0 1.0
CA A:GLY13 4.3 24.1 1.0
NZ A:LYS18 4.3 21.9 1.0
O1A A:ATP1380 4.4 25.6 1.0
OD2 A:ASP154 4.4 26.1 1.0
O A:HOH1409 4.5 13.6 1.0
CD A:GLN137 4.6 25.2 1.0
OD1 A:ASP154 4.6 24.3 1.0
O A:HOH1414 4.6 13.9 1.0
O A:HOH1808 4.7 54.6 1.0
OD2 A:ASP11 4.7 22.9 1.0
PA A:ATP1380 4.7 25.7 1.0
OD1 A:ASP11 4.8 25.8 1.0
O1B A:ATP1380 4.8 23.6 1.0
O2G A:ATP1380 4.9 25.0 1.0
CG A:ASP154 4.9 26.1 1.0
NE2 A:GLN137 5.0 21.4 1.0
O A:HOH1415 5.0 13.4 1.0

Reference:

S.M.Margarit, W.Davidson, L.Frego, C.E.Stebbins. A Steric Antagonism of Actin Polymerization By A Salmonella Virulence Protein. Structure V. 14 1219 2006.
ISSN: ISSN 0969-2126
PubMed: 16905096
DOI: 10.1016/J.STR.2006.05.022
Page generated: Fri Jul 12 10:56:55 2024

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