Calcium in PDB 2h9d: Pyruvate-Bound Structure of the Isochorismate-Pyruvate Lyase From Pseudomonas Aerugionsa

The structure of Pyruvate-Bound Structure of the Isochorismate-Pyruvate Lyase From Pseudomonas Aerugionsa, PDB code: 2h9d was solved by A.L.Lamb, J.Zaitseva, J.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	57.20 / 1.95
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	54.523, 74.636, 88.902, 90.00, 90.00, 90.00
R / Rfree (%)	21 / 25.2

The binding sites of Calcium atom in the Pyruvate-Bound Structure of the Isochorismate-Pyruvate Lyase From Pseudomonas Aerugionsa (pdb code 2h9d). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Pyruvate-Bound Structure of the Isochorismate-Pyruvate Lyase From Pseudomonas Aerugionsa, PDB code: 2h9d:

Calcium binding site 1 out of 1 in the Pyruvate-Bound Structure of the Isochorismate-Pyruvate Lyase From Pseudomonas Aerugionsa


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Pyruvate-Bound Structure of the Isochorismate-Pyruvate Lyase From Pseudomonas Aerugionsa within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca301 b:1.0 occ:1.00 O C:HOH238 2.5 43.9 1.0 OE2 D:GLU15 2.5 22.9 1.0 OD2 D:ASP18 2.6 25.6 1.0 O D:HOH343 2.7 34.3 1.0 OE1 D:GLU15 3.1 28.1 1.0 CD D:GLU15 3.2 24.0 1.0 CG D:ASP18 3.6 21.1 1.0 CB D:ASP18 3.9 18.3 1.0 O C:HOH239 4.0 46.8 1.0 CG D:GLU15 4.6 21.4 1.0 OD1 D:ASP18 4.7 19.7 1.0 OE2 C:GLU60 4.8 37.7 1.0 OE1 C:GLU60 5.0 36.0 1.0 CA D:GLU15 5.0 18.9 1.0

J.Zaitseva, J.Lu, K.L.Olechoski, A.L.Lamb. Two Crystal Structures of the Isochorismate Pyruvate Lyase From Pseudomonas Aeruginosa. J.Biol.Chem. V. 281 33441 2006.
ISSN: ISSN 0021-9258
PubMed: 16914555
DOI: 10.1074/JBC.M605470200