Calcium in PDB 2i94: uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase
Enzymatic activity of uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase
All present enzymatic activity of uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase:
2.7.11.14;
Calcium Binding Sites:
The binding sites of Calcium atom in the uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase
(pdb code 2i94). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase, PDB code: 2i94:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 2i94
Go back to
Calcium Binding Sites List in 2i94
Calcium binding site 1 out
of 2 in the uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca500
b:0.0
occ:1.00
|
HA
|
A:ASP74
|
2.2
|
0.0
|
1.0
|
OE1
|
A:GLU85
|
2.5
|
0.0
|
1.0
|
OE2
|
A:GLU85
|
2.5
|
0.0
|
1.0
|
O
|
A:ASP74
|
2.6
|
0.0
|
1.0
|
O
|
A:THR80
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP78
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP74
|
2.7
|
0.0
|
1.0
|
OD1
|
A:ASN76
|
2.7
|
0.0
|
1.0
|
HB3
|
A:ASP78
|
2.8
|
0.0
|
1.0
|
CD
|
A:GLU85
|
2.8
|
0.0
|
1.0
|
CA
|
A:ASP74
|
3.0
|
0.0
|
1.0
|
H
|
A:GLY79
|
3.1
|
0.0
|
1.0
|
C
|
A:ASP74
|
3.2
|
0.0
|
1.0
|
C
|
A:THR80
|
3.2
|
0.0
|
1.0
|
HA
|
A:LEU81
|
3.2
|
0.0
|
1.0
|
CG
|
A:ASP78
|
3.4
|
0.0
|
1.0
|
O
|
A:PHE73
|
3.5
|
0.0
|
1.0
|
CG
|
A:ASP74
|
3.5
|
0.0
|
1.0
|
CB
|
A:ASP78
|
3.6
|
0.0
|
1.0
|
H
|
A:THR80
|
3.6
|
0.0
|
1.0
|
N
|
A:THR80
|
3.7
|
0.0
|
1.0
|
HG
|
A:LEU81
|
3.8
|
0.0
|
1.0
|
N
|
A:LEU81
|
3.8
|
0.0
|
1.0
|
CB
|
A:ASP74
|
3.8
|
0.0
|
1.0
|
CG
|
A:ASN76
|
3.9
|
0.0
|
1.0
|
CA
|
A:THR80
|
3.9
|
0.0
|
1.0
|
N
|
A:GLY79
|
4.0
|
0.0
|
1.0
|
H
|
A:ASN76
|
4.0
|
0.0
|
1.0
|
CA
|
A:LEU81
|
4.0
|
0.0
|
1.0
|
N
|
A:ASP74
|
4.1
|
0.0
|
1.0
|
HB2
|
A:ASP78
|
4.2
|
0.0
|
1.0
|
HA
|
A:THR80
|
4.2
|
0.0
|
1.0
|
HB2
|
A:ASP74
|
4.2
|
0.0
|
1.0
|
C
|
A:PHE73
|
4.2
|
0.0
|
1.0
|
C
|
A:GLY79
|
4.2
|
0.0
|
1.0
|
H
|
A:ASP82
|
4.3
|
0.0
|
1.0
|
HD22
|
A:ASN76
|
4.3
|
0.0
|
1.0
|
CG
|
A:GLU85
|
4.3
|
0.0
|
1.0
|
N
|
A:ALA75
|
4.4
|
0.0
|
1.0
|
OD1
|
A:ASP78
|
4.5
|
0.0
|
1.0
|
ND2
|
A:ASN76
|
4.5
|
0.0
|
1.0
|
OD2
|
A:ASP74
|
4.6
|
0.0
|
1.0
|
H
|
A:LEU81
|
4.6
|
0.0
|
1.0
|
N
|
A:ASN76
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASP78
|
4.7
|
0.0
|
1.0
|
CA
|
A:GLY79
|
4.7
|
0.0
|
1.0
|
CG
|
A:LEU81
|
4.8
|
0.0
|
1.0
|
HB3
|
A:ASP74
|
4.8
|
0.0
|
1.0
|
HG3
|
A:GLU85
|
4.8
|
0.0
|
1.0
|
C
|
A:ASP78
|
4.8
|
0.0
|
1.0
|
O
|
A:GLY79
|
4.8
|
0.0
|
1.0
|
HG2
|
A:GLU85
|
4.9
|
0.0
|
1.0
|
HB3
|
A:GLU85
|
4.9
|
0.0
|
1.0
|
HB2
|
A:GLU85
|
4.9
|
0.0
|
1.0
|
CB
|
A:LEU81
|
4.9
|
0.0
|
1.0
|
HB3
|
A:ASN76
|
5.0
|
0.0
|
1.0
|
CB
|
A:ASN76
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 2i94
Go back to
Calcium Binding Sites List in 2i94
Calcium binding site 2 out
of 2 in the uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of uc(Nmr) Structure of Recoverin Bound to Rhodopsin Kinase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca501
b:0.0
occ:1.00
|
OD2
|
A:ASP110
|
2.2
|
0.0
|
1.0
|
CG
|
A:ASP110
|
2.4
|
0.0
|
1.0
|
HA
|
A:ASN114
|
2.5
|
0.0
|
1.0
|
OE1
|
A:GLU121
|
2.7
|
0.0
|
1.0
|
OE2
|
A:GLU121
|
2.7
|
0.0
|
1.0
|
O
|
A:THR116
|
2.7
|
0.0
|
1.0
|
OD2
|
A:ASP112
|
2.8
|
0.0
|
1.0
|
OD1
|
A:ASP110
|
2.8
|
0.0
|
1.0
|
H
|
A:GLY115
|
2.9
|
0.0
|
1.0
|
CD
|
A:GLU121
|
3.0
|
0.0
|
1.0
|
HB2
|
A:ASP110
|
3.0
|
0.0
|
1.0
|
H
|
A:THR116
|
3.1
|
0.0
|
1.0
|
CB
|
A:ASP110
|
3.2
|
0.0
|
1.0
|
OD1
|
A:ASN114
|
3.3
|
0.0
|
1.0
|
CA
|
A:ASN114
|
3.5
|
0.0
|
1.0
|
C
|
A:THR116
|
3.6
|
0.0
|
1.0
|
HA
|
A:ILE117
|
3.6
|
0.0
|
1.0
|
N
|
A:GLY115
|
3.6
|
0.0
|
1.0
|
N
|
A:THR116
|
3.8
|
0.0
|
1.0
|
HB3
|
A:ASP110
|
3.8
|
0.0
|
1.0
|
H
|
A:GLY113
|
3.9
|
0.0
|
1.0
|
N
|
A:ASN114
|
3.9
|
0.0
|
1.0
|
CG
|
A:ASP112
|
4.0
|
0.0
|
1.0
|
HG12
|
A:ILE117
|
4.0
|
0.0
|
1.0
|
C
|
A:ASN114
|
4.0
|
0.0
|
1.0
|
O
|
A:GLY113
|
4.1
|
0.0
|
1.0
|
C
|
A:GLY113
|
4.2
|
0.0
|
1.0
|
HG13
|
A:ILE117
|
4.2
|
0.0
|
1.0
|
CG
|
A:ASN114
|
4.3
|
0.0
|
1.0
|
CA
|
A:THR116
|
4.3
|
0.0
|
1.0
|
H
|
A:ASN114
|
4.3
|
0.0
|
1.0
|
N
|
A:ILE117
|
4.4
|
0.0
|
1.0
|
HE2
|
A:PHE106
|
4.4
|
0.0
|
1.0
|
CA
|
A:ASP110
|
4.4
|
0.0
|
1.0
|
HA
|
A:ASP110
|
4.4
|
0.0
|
1.0
|
CA
|
A:ILE117
|
4.5
|
0.0
|
1.0
|
CG
|
A:GLU121
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASN114
|
4.5
|
0.0
|
1.0
|
OD1
|
A:ASP112
|
4.6
|
0.0
|
1.0
|
CG1
|
A:ILE117
|
4.6
|
0.0
|
1.0
|
C
|
A:GLY115
|
4.7
|
0.0
|
1.0
|
CE2
|
A:PHE106
|
4.7
|
0.0
|
1.0
|
CA
|
A:GLY115
|
4.7
|
0.0
|
1.0
|
HG2
|
A:GLU121
|
4.7
|
0.0
|
1.0
|
HA
|
A:THR116
|
4.8
|
0.0
|
1.0
|
N
|
A:GLY113
|
4.8
|
0.0
|
1.0
|
H
|
A:SER118
|
4.8
|
0.0
|
1.0
|
HZ
|
A:PHE106
|
4.9
|
0.0
|
1.0
|
HG3
|
A:GLU121
|
4.9
|
0.0
|
1.0
|
CZ
|
A:PHE106
|
5.0
|
0.0
|
1.0
|
|
Reference:
J.B.Ames,
K.Levay,
J.N.Wingard,
J.D.Lusin,
V.Z.Slepak.
Structural Basis For Calcium-Induced Inhibition of Rhodopsin Kinase By Recoverin. J.Biol.Chem. V. 281 37237 2006.
ISSN: ISSN 0021-9258
PubMed: 17020884
DOI: 10.1074/JBC.M606913200
Page generated: Fri Jul 12 13:00:29 2024
|