Atomistry » Calcium » PDB 2i5w-2imw » 2icf
Atomistry »
  Calcium »
    PDB 2i5w-2imw »
      2icf »

Calcium in PDB 2icf: Crig Bound to C3B

Protein crystallography data

The structure of Crig Bound to C3B, PDB code: 2icf was solved by C.Wiesmann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 4.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 97.614, 255.749, 180.302, 90.00, 90.00, 90.00
R / Rfree (%) 25.2 / 33

Calcium Binding Sites:

The binding sites of Calcium atom in the Crig Bound to C3B (pdb code 2icf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crig Bound to C3B, PDB code: 2icf:

Calcium binding site 1 out of 1 in 2icf

Go back to Calcium Binding Sites List in 2icf
Calcium binding site 1 out of 1 in the Crig Bound to C3B


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crig Bound to C3B within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca647

b:1.0
occ:1.00
OD1 A:ASP535 2.4 0.1 1.0
OD1 A:ASP532 2.5 0.5 1.0
O A:PRO505 2.6 0.1 1.0
O A:VAL533 2.7 0.3 1.0
OD2 A:ASP535 3.0 0.3 1.0
CG A:ASP535 3.0 0.3 1.0
CG A:ASP532 3.5 1.0 1.0
C A:PRO505 3.6 0.2 1.0
CB A:PRO505 3.8 0.3 1.0
C A:VAL533 3.9 0.1 1.0
N A:VAL533 3.9 0.7 1.0
OD2 A:ASP532 3.9 0.9 1.0
CA A:PRO505 4.0 0.6 1.0
N A:ASP535 4.4 0.8 1.0
CB A:ASP535 4.4 0.8 1.0
CA A:VAL533 4.5 0.7 1.0
OE1 A:GLU599 4.6 0.3 1.0
N A:SER506 4.6 0.7 1.0
CB A:ASP532 4.7 0.9 1.0
CA A:ASP532 4.7 0.7 1.0
CA A:ASP535 4.7 0.2 1.0
C A:ASP532 4.8 0.9 1.0
CB A:SER506 4.8 0.2 1.0
CG A:PRO505 4.9 0.2 1.0
N A:LYS534 4.9 0.9 1.0
C A:LYS534 5.0 0.5 1.0

Reference:

C.Wiesmann, K.J.Katschke, J.Yin, K.Y.Helmy, M.Steffek, W.J.Fairbrother, S.A.Mccallum, L.Embuscado, L.Deforge, P.E.Hass, M.Van Lookeren Campagne. Structure of C3B in Complex with Crig Gives Insights Into Regulation of Complement Activation. Nature V. 444 217 2006.
ISSN: ISSN 0028-0836
PubMed: 17051150
DOI: 10.1038/NATURE05263
Page generated: Fri Jul 12 13:03:36 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy