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Calcium in PDB 2iqy: Rat Phosphatidylethanolamine-Binding Protein

Protein crystallography data

The structure of Rat Phosphatidylethanolamine-Binding Protein, PDB code: 2iqy was solved by Y.Kim, G.Joachimiak, G.L.Heil, S.Koide, A.Joachimiak, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.23 / 1.40
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 31.694, 70.588, 38.672, 90.00, 109.96, 90.00
R / Rfree (%) 14.9 / 19.3

Other elements in 2iqy:

The structure of Rat Phosphatidylethanolamine-Binding Protein also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Rat Phosphatidylethanolamine-Binding Protein (pdb code 2iqy). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Rat Phosphatidylethanolamine-Binding Protein, PDB code: 2iqy:

Calcium binding site 1 out of 1 in 2iqy

Go back to Calcium Binding Sites List in 2iqy
Calcium binding site 1 out of 1 in the Rat Phosphatidylethanolamine-Binding Protein


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Rat Phosphatidylethanolamine-Binding Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:9.5
occ:1.00
O A:HOH531 2.4 13.0 1.0
OE2 A:GLU152 2.4 8.9 1.0
O A:HOH753 2.4 21.2 1.0
OE1 A:GLU152 2.5 10.5 1.0
O A:HOH641 2.6 20.0 1.0
CD A:GLU152 2.8 9.9 1.0
O A:HOH615 3.9 17.8 1.0
O A:HOH677 4.1 23.1 1.0
CG A:GLU152 4.3 8.2 1.0
O A:HOH526 4.5 10.0 1.0
O A:GLN15 4.7 6.4 1.0
O A:HOH716 4.9 27.5 1.0

Reference:

Y.Kim, G.Joachimiak, G.L.Heil, S.Koide, A.Joachimiak. Crystal Structure of Rat Phosphatidylethanolamine-Binding Protein To Be Published.
Page generated: Fri Jul 12 13:09:42 2024

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