Calcium in PDB 2jnx: uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica

The binding sites of Calcium atom in the uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica (pdb code 2jnx). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica, PDB code: 2jnx:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca145 b:0.0 occ:1.00 HG22 A:VAL17 1.2 0.0 1.0 CG2 A:VAL17 1.2 0.0 1.0 HG21 A:VAL17 1.3 0.0 1.0 HB A:VAL17 1.8 0.0 1.0 CB A:VAL17 1.8 0.0 1.0 OD1 A:ASP10 2.3 0.0 1.0 HG23 A:VAL17 2.3 0.0 1.0 HG13 A:VAL17 2.5 0.0 1.0 CG1 A:VAL17 2.6 0.0 1.0 HG12 A:VAL17 3.1 0.0 1.0 HD2 A:ASP10 3.1 0.0 1.0 CG A:ASP10 3.2 0.0 1.0 CA A:VAL17 3.2 0.0 1.0 OE1 A:GLU21 3.3 0.0 1.0 OD1 A:ASN12 3.4 0.0 1.0 OE2 A:GLU21 3.4 0.0 1.0 HA A:VAL17 3.4 0.0 1.0 O A:SER16 3.4 0.0 1.0 OD2 A:ASP10 3.4 0.0 1.0 OD1 A:ASP14 3.5 0.0 1.0 HG11 A:VAL17 3.6 0.0 1.0 CD A:GLU21 3.6 0.0 1.0 HD2 A:ASP14 3.7 0.0 1.0 OD2 A:ASP14 3.7 0.0 1.0 H A:SER18 3.7 0.0 1.0 HE2 A:GLU21 3.9 0.0 1.0 CG A:ASP14 4.0 0.0 1.0 N A:VAL17 4.0 0.0 1.0 C A:SER16 4.0 0.0 1.0 HZ A:PHE6 4.2 0.0 1.0 C A:VAL17 4.3 0.0 1.0 N A:SER18 4.3 0.0 1.0 HE2 A:PHE6 4.4 0.0 1.0 CG A:ASN12 4.5 0.0 1.0 HA A:ASP10 4.5 0.0 1.0 CB A:ASP10 4.6 0.0 1.0 CZ A:PHE6 4.9 0.0 1.0 H A:VAL17 4.9 0.0 1.0 CE2 A:PHE6 5.0 0.0 1.0 CB A:ASN12 5.0 0.0 1.0

Calcium binding site 2 out of 4 in the uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca155 b:0.0 occ:1.00 HE2 A:GLU57 2.4 0.0 1.0 OD2 A:ASP46 2.7 0.0 1.0 HB3 A:ASP48 2.9 0.0 1.0 HD2 A:ASP46 2.9 0.0 1.0 O A:GLU52 3.2 0.0 1.0 HA A:ILE53 3.3 0.0 1.0 OE1 A:GLU57 3.3 0.0 1.0 OD1 A:ASN50 3.3 0.0 1.0 OE2 A:GLU57 3.3 0.0 1.0 CD A:GLU57 3.7 0.0 1.0 CB A:ASP48 3.8 0.0 1.0 CG A:ASP46 3.9 0.0 1.0 HG23 A:ILE53 4.0 0.0 1.0 CG A:ASP48 4.0 0.0 1.0 OD1 A:ASP48 4.0 0.0 1.0 HD22 A:ASN50 4.1 0.0 1.0 C A:GLU52 4.1 0.0 1.0 CG A:ASN50 4.3 0.0 1.0 CA A:ILE53 4.3 0.0 1.0 OD1 A:ASP46 4.4 0.0 1.0 H A:ASP48 4.4 0.0 1.0 HG21 A:ILE53 4.5 0.0 1.0 H A:GLY51 4.6 0.0 1.0 ND2 A:ASN50 4.6 0.0 1.0 CG2 A:ILE53 4.6 0.0 1.0 N A:ILE53 4.6 0.0 1.0 OD2 A:ASP48 4.8 0.0 1.0 CB A:ILE53 4.9 0.0 1.0 CB A:ASP46 4.9 0.0 1.0 H A:GLU52 5.0 0.0 1.0 HA A:ASP46 5.0 0.0 1.0 CG1 A:ILE53 5.0 0.0 1.0

Calcium binding site 3 out of 4 in the uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca175 b:0.0 occ:1.00 CA A:GLY88 0.5 0.0 1.0 N A:GLY88 1.0 0.0 1.0 HA3 A:GLY88 1.3 0.0 1.0 HA2 A:GLY88 1.3 0.0 1.0 H A:GLY88 1.6 0.0 1.0 C A:GLY88 1.9 0.0 1.0 C A:ASP87 2.0 0.0 1.0 HE2 A:GLU96 2.4 0.0 1.0 N A:ASP89 2.6 0.0 1.0 H A:ASP89 2.6 0.0 1.0 O A:ASP87 2.6 0.0 1.0 O A:GLY88 2.8 0.0 1.0 O A:LYS91 3.1 0.0 1.0 OD1 A:ASP85 3.1 0.0 1.0 OE2 A:GLU96 3.3 0.0 1.0 OE1 A:GLU96 3.3 0.0 1.0 CA A:ASP87 3.3 0.0 1.0 H A:GLY90 3.6 0.0 1.0 H A:ASP87 3.6 0.0 1.0 N A:ASP87 3.7 0.0 1.0 CD A:GLU96 3.7 0.0 1.0 HD2 A:ASP87 3.7 0.0 1.0 HD3 A:LYS91 3.8 0.0 1.0 HB3 A:ASP87 3.9 0.0 1.0 CB A:ASP87 3.9 0.0 1.0 CA A:ASP89 4.0 0.0 1.0 HA A:LEU92 4.0 0.0 1.0 HD21 A:LEU92 4.0 0.0 1.0 CG A:ASP87 4.0 0.0 1.0 CG A:ASP85 4.0 0.0 1.0 CG A:ASP89 4.0 0.0 1.0 HD2 A:ASP89 4.1 0.0 1.0 H A:LYS91 4.1 0.0 1.0 OD2 A:ASP89 4.1 0.0 1.0 HA A:ASP87 4.2 0.0 1.0 OD1 A:ASP89 4.2 0.0 1.0 C A:LYS91 4.2 0.0 1.0 OD2 A:ASP87 4.3 0.0 1.0 OD1 A:ASP87 4.4 0.0 1.0 N A:GLY90 4.4 0.0 1.0 HA A:ASP85 4.5 0.0 1.0 C A:ALA86 4.5 0.0 1.0 HA A:ASP89 4.5 0.0 1.0 CB A:ASP89 4.5 0.0 1.0 HG21 A:THR93 4.6 0.0 1.0 HB3 A:ASP85 4.7 0.0 1.0 N A:LYS91 4.7 0.0 1.0 H A:THR93 4.7 0.0 1.0 C A:ASP89 4.7 0.0 1.0 CD A:LYS91 4.8 0.0 1.0 CB A:ASP85 4.8 0.0 1.0 HD22 A:LEU92 4.8 0.0 1.0 C A:ASP85 4.8 0.0 1.0 OD2 A:ASP85 4.8 0.0 1.0 N A:ALA86 4.8 0.0 1.0 CD2 A:LEU92 4.8 0.0 1.0 CE A:LYS91 4.9 0.0 1.0 CA A:ASP85 4.9 0.0 1.0 H A:ALA86 4.9 0.0 1.0 CA A:LEU92 5.0 0.0 1.0 HG A:LEU92 5.0 0.0 1.0

Calcium binding site 4 out of 4 in the uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca185 b:0.0 occ:1.00 HD2 A:ASP117 1.5 0.0 1.0 HE2 A:GLU128 2.4 0.0 1.0 OD2 A:ASP117 2.4 0.0 1.0 OD2 A:ASP121 2.8 0.0 1.0 CB A:ASP121 3.2 0.0 1.0 HD2 A:ASP121 3.3 0.0 1.0 CG A:ASP117 3.3 0.0 1.0 HB3 A:ASP121 3.3 0.0 1.0 OE2 A:GLU128 3.3 0.0 1.0 O A:TYR123 3.3 0.0 1.0 OE1 A:GLU128 3.3 0.0 1.0 OD1 A:ASN119 3.3 0.0 1.0 CG A:ASP121 3.5 0.0 1.0 CD A:GLU128 3.5 0.0 1.0 HD22 A:ASN119 3.5 0.0 1.0 CB A:ASP117 3.8 0.0 1.0 HA A:ASP117 3.8 0.0 1.0 H A:TYR123 4.0 0.0 1.0 OD1 A:ASP117 4.1 0.0 1.0 CG A:ASN119 4.1 0.0 1.0 ND2 A:ASN119 4.2 0.0 1.0 H A:GLY122 4.3 0.0 1.0 CA A:ASP117 4.3 0.0 1.0 HA A:ILE124 4.3 0.0 1.0 H A:ALA118 4.4 0.0 1.0 HE1 A:TYR123 4.4 0.0 1.0 C A:TYR123 4.4 0.0 1.0 CE1 A:TYR123 4.5 0.0 1.0 CA A:ASP121 4.5 0.0 1.0 CD1 A:TYR123 4.6 0.0 1.0 H A:ASP121 4.6 0.0 1.0 HD1 A:TYR123 4.6 0.0 1.0 OD1 A:ASP121 4.7 0.0 1.0 CG A:GLU128 4.7 0.0 1.0 HB3 A:ASP117 4.7 0.0 1.0 H A:ASN119 4.7 0.0 1.0 H A:GLY120 4.8 0.0 1.0 HH A:TYR123 4.8 0.0 1.0 N A:GLY122 4.8 0.0 1.0 N A:TYR123 4.8 0.0 1.0 N A:ASP121 4.8 0.0 1.0 HG13 A:ILE124 5.0 0.0 1.0 CZ A:TYR123 5.0 0.0 1.0

S.M.Mustafi, R.B.Mutalik. Structure, Dynamics, and Physiological Properties of A Calcium Binding Protein From Entamoeba Histolytica (EHCABP2) To Be Published.