Calcium in PDB 2jzi: Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin
Enzymatic activity of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin
All present enzymatic activity of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin:
3.1.3.16;
Calcium Binding Sites:
The binding sites of Calcium atom in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin
(pdb code 2jzi). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the
Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin, PDB code: 2jzi:
Jump to Calcium binding site number:
1;
2;
3;
4;
Calcium binding site 1 out
of 4 in 2jzi
Go back to
Calcium Binding Sites List in 2jzi
Calcium binding site 1 out
of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca149
b:0.0
occ:1.00
|
OD2
|
A:ASP24
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP20
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP24
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP20
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP22
|
2.7
|
0.0
|
1.0
|
OD2
|
A:ASP22
|
2.8
|
0.0
|
1.0
|
O
|
A:THR26
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP20
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP24
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP22
|
3.1
|
0.0
|
1.0
|
HG22
|
A:THR28
|
3.4
|
0.0
|
1.0
|
H
|
A:ASP24
|
3.8
|
0.0
|
1.0
|
HA
|
A:ILE27
|
3.8
|
0.0
|
1.0
|
C
|
A:THR26
|
3.8
|
0.0
|
1.0
|
H
|
A:THR28
|
3.9
|
0.0
|
1.0
|
OG1
|
A:THR26
|
3.9
|
0.0
|
1.0
|
HB
|
A:THR28
|
3.9
|
0.0
|
1.0
|
H
|
A:ASP22
|
4.0
|
0.0
|
1.0
|
HG1
|
A:THR26
|
4.1
|
0.0
|
1.0
|
HG21
|
A:THR62
|
4.2
|
0.0
|
1.0
|
N
|
A:THR28
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP20
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP24
|
4.3
|
0.0
|
1.0
|
H
|
A:THR26
|
4.3
|
0.0
|
1.0
|
HB2
|
A:ASP20
|
4.4
|
0.0
|
1.0
|
CG2
|
A:THR28
|
4.4
|
0.0
|
1.0
|
CA
|
A:ILE27
|
4.5
|
0.0
|
1.0
|
C
|
A:ILE27
|
4.5
|
0.0
|
1.0
|
HB3
|
A:ASP24
|
4.5
|
0.0
|
1.0
|
N
|
A:ILE27
|
4.5
|
0.0
|
1.0
|
CB
|
A:THR28
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASP22
|
4.6
|
0.0
|
1.0
|
N
|
A:ASP24
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP20
|
4.7
|
0.0
|
1.0
|
HG23
|
A:THR28
|
4.8
|
0.0
|
1.0
|
CA
|
A:THR26
|
4.8
|
0.0
|
1.0
|
H
|
A:GLY23
|
4.8
|
0.0
|
1.0
|
CA
|
A:THR28
|
4.8
|
0.0
|
1.0
|
HB
|
A:THR62
|
4.8
|
0.0
|
1.0
|
N
|
A:ASP22
|
4.9
|
0.0
|
1.0
|
HA
|
A:THR28
|
4.9
|
0.0
|
1.0
|
H
|
A:LYS21
|
4.9
|
0.0
|
1.0
|
CB
|
A:THR26
|
4.9
|
0.0
|
1.0
|
N
|
A:THR26
|
5.0
|
0.0
|
1.0
|
HB2
|
A:ASP24
|
5.0
|
0.0
|
1.0
|
HB2
|
A:ASP22
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 4 in 2jzi
Go back to
Calcium Binding Sites List in 2jzi
Calcium binding site 2 out
of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca150
b:0.0
occ:1.00
|
OD1
|
A:ASN60
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP56
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP58
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP56
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP58
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP64
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP58
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP56
|
3.0
|
0.0
|
1.0
|
HD22
|
A:ASN60
|
3.0
|
0.0
|
1.0
|
CG
|
A:ASN60
|
3.0
|
0.0
|
1.0
|
OG1
|
A:THR62
|
3.1
|
0.0
|
1.0
|
HG1
|
A:THR62
|
3.1
|
0.0
|
1.0
|
ND2
|
A:ASN60
|
3.3
|
0.0
|
1.0
|
H
|
A:ASN60
|
3.5
|
0.0
|
1.0
|
CG
|
A:ASP64
|
3.6
|
0.0
|
1.0
|
H
|
A:ASP58
|
3.7
|
0.0
|
1.0
|
OD2
|
A:ASP64
|
3.8
|
0.0
|
1.0
|
O
|
A:THR62
|
4.0
|
0.0
|
1.0
|
HD21
|
A:ASN60
|
4.0
|
0.0
|
1.0
|
HB3
|
A:ASN60
|
4.1
|
0.0
|
1.0
|
CB
|
A:ASN60
|
4.2
|
0.0
|
1.0
|
H
|
A:THR62
|
4.2
|
0.0
|
1.0
|
H
|
A:ALA57
|
4.3
|
0.0
|
1.0
|
H
|
A:GLY59
|
4.3
|
0.0
|
1.0
|
C
|
A:THR62
|
4.3
|
0.0
|
1.0
|
N
|
A:ASN60
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP58
|
4.4
|
0.0
|
1.0
|
CB
|
A:THR62
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASP56
|
4.5
|
0.0
|
1.0
|
HG22
|
A:THR26
|
4.5
|
0.0
|
1.0
|
N
|
A:ASP58
|
4.6
|
0.0
|
1.0
|
HG22
|
A:THR62
|
4.7
|
0.0
|
1.0
|
N
|
A:GLY59
|
4.7
|
0.0
|
1.0
|
N
|
A:ASP64
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ASP58
|
4.7
|
0.0
|
1.0
|
CA
|
A:THR62
|
4.8
|
0.0
|
1.0
|
H
|
A:ASP64
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASN60
|
4.8
|
0.0
|
1.0
|
HA
|
A:ILE63
|
4.8
|
0.0
|
1.0
|
HA
|
A:ASP64
|
4.8
|
0.0
|
1.0
|
N
|
A:ILE63
|
4.8
|
0.0
|
1.0
|
N
|
A:THR62
|
4.8
|
0.0
|
1.0
|
C
|
A:ILE63
|
4.8
|
0.0
|
1.0
|
HB2
|
A:ASP56
|
4.8
|
0.0
|
1.0
|
CB
|
A:ASP64
|
4.9
|
0.0
|
1.0
|
CA
|
A:ASP58
|
4.9
|
0.0
|
1.0
|
HB3
|
A:ASP56
|
4.9
|
0.0
|
1.0
|
HG1
|
A:THR26
|
5.0
|
0.0
|
1.0
|
N
|
A:ALA57
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 3 out
of 4 in 2jzi
Go back to
Calcium Binding Sites List in 2jzi
Calcium binding site 3 out
of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca151
b:0.0
occ:1.00
|
HB2
|
A:ASN97
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASN97
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP93
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP93
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP95
|
2.7
|
0.0
|
1.0
|
OD2
|
A:ASP95
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP93
|
3.0
|
0.0
|
1.0
|
CG
|
A:ASP95
|
3.0
|
0.0
|
1.0
|
H
|
A:ASN97
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASN97
|
3.3
|
0.0
|
1.0
|
CB
|
A:ASN97
|
3.4
|
0.0
|
1.0
|
H
|
A:ASP95
|
3.5
|
0.0
|
1.0
|
O
|
A:TYR99
|
3.8
|
0.0
|
1.0
|
HG3
|
A:GLU104
|
3.8
|
0.0
|
1.0
|
HB3
|
A:ASN97
|
4.1
|
0.0
|
1.0
|
N
|
A:ASN97
|
4.1
|
0.0
|
1.0
|
H
|
A:LYS94
|
4.2
|
0.0
|
1.0
|
H
|
A:GLY96
|
4.3
|
0.0
|
1.0
|
CA
|
A:ASN97
|
4.4
|
0.0
|
1.0
|
N
|
A:ASP95
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASP95
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASP93
|
4.5
|
0.0
|
1.0
|
HB2
|
A:LYS94
|
4.6
|
0.0
|
1.0
|
ND2
|
A:ASN97
|
4.6
|
0.0
|
1.0
|
H
|
A:TYR99
|
4.6
|
0.0
|
1.0
|
HB3
|
A:ASP95
|
4.8
|
0.0
|
1.0
|
N
|
A:GLY96
|
4.8
|
0.0
|
1.0
|
N
|
A:LYS94
|
4.8
|
0.0
|
1.0
|
CG
|
A:GLU104
|
4.9
|
0.0
|
1.0
|
HB3
|
A:ASP93
|
4.9
|
0.0
|
1.0
|
CA
|
A:ASP95
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP93
|
5.0
|
0.0
|
1.0
|
C
|
A:TYR99
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 4 out
of 4 in 2jzi
Go back to
Calcium Binding Sites List in 2jzi
Calcium binding site 4 out
of 4 in the Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca152
b:0.0
occ:1.00
|
HB2
|
A:ASP131
|
2.5
|
0.0
|
1.0
|
HG3
|
A:GLN135
|
2.6
|
0.0
|
1.0
|
CG
|
A:ASP131
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP129
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP133
|
2.6
|
0.0
|
1.0
|
OD2
|
A:ASP129
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASP133
|
2.7
|
0.0
|
1.0
|
OD1
|
A:ASP131
|
2.8
|
0.0
|
1.0
|
OE1
|
A:GLU140
|
2.8
|
0.0
|
1.0
|
O
|
A:GLN135
|
2.8
|
0.0
|
1.0
|
OD2
|
A:ASP131
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP133
|
2.9
|
0.0
|
1.0
|
CG
|
A:ASP129
|
2.9
|
0.0
|
1.0
|
CB
|
A:ASP131
|
3.1
|
0.0
|
1.0
|
CD
|
A:GLU140
|
3.4
|
0.0
|
1.0
|
H
|
A:ASP131
|
3.5
|
0.0
|
1.0
|
CG
|
A:GLN135
|
3.6
|
0.0
|
1.0
|
OE2
|
A:GLU140
|
3.6
|
0.0
|
1.0
|
C
|
A:GLN135
|
3.7
|
0.0
|
1.0
|
H
|
A:GLN135
|
3.7
|
0.0
|
1.0
|
HB3
|
A:ASP131
|
3.8
|
0.0
|
1.0
|
HB2
|
A:GLN135
|
3.9
|
0.0
|
1.0
|
H
|
A:ASP133
|
3.9
|
0.0
|
1.0
|
HG2
|
A:GLN135
|
3.9
|
0.0
|
1.0
|
CB
|
A:GLN135
|
4.1
|
0.0
|
1.0
|
N
|
A:ASP131
|
4.2
|
0.0
|
1.0
|
CA
|
A:ASP131
|
4.2
|
0.0
|
1.0
|
HA
|
A:VAL136
|
4.2
|
0.0
|
1.0
|
CB
|
A:ASP133
|
4.2
|
0.0
|
1.0
|
CA
|
A:GLN135
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASP133
|
4.3
|
0.0
|
1.0
|
HG2
|
A:GLU140
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP129
|
4.3
|
0.0
|
1.0
|
N
|
A:GLN135
|
4.4
|
0.0
|
1.0
|
HB2
|
A:ASP129
|
4.5
|
0.0
|
1.0
|
CG
|
A:GLU140
|
4.5
|
0.0
|
1.0
|
H
|
A:ASN137
|
4.5
|
0.0
|
1.0
|
H
|
A:ILE130
|
4.5
|
0.0
|
1.0
|
HG12
|
A:ILE130
|
4.6
|
0.0
|
1.0
|
CD
|
A:GLN135
|
4.6
|
0.0
|
1.0
|
N
|
A:VAL136
|
4.7
|
0.0
|
1.0
|
HG13
|
A:ILE130
|
4.7
|
0.0
|
1.0
|
H
|
A:GLY132
|
4.7
|
0.0
|
1.0
|
N
|
A:ASP133
|
4.8
|
0.0
|
1.0
|
H
|
A:GLY134
|
4.8
|
0.0
|
1.0
|
C
|
A:ASP131
|
4.8
|
0.0
|
1.0
|
HB3
|
A:ASP129
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP133
|
4.9
|
0.0
|
1.0
|
CA
|
A:VAL136
|
5.0
|
0.0
|
1.0
|
N
|
A:GLY132
|
5.0
|
0.0
|
1.0
|
|
Reference:
C.Chyan,
J.Huang,
D.Irene,
T.Lin.
Structure of Calmodulin Complexed with the Calmodulin Binding Domain of Calcineurin To Be Published.
Page generated: Fri Jul 12 13:52:36 2024
|