Calcium in PDB 2k0e: A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction

The binding sites of Calcium atom in the A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction (pdb code 2k0e). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction, PDB code: 2k0e:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca151 b:0.0 occ:1.00 OD1 A:ASP24 2.4 0.0 1.0 OD2 A:ASP20 2.5 0.0 1.0 O A:THR26 2.5 0.0 1.0 OD2 A:ASP22 2.6 0.0 1.0 OE2 A:GLU31 2.6 0.0 1.0 OE1 A:GLU31 2.6 0.0 1.0 OD1 A:ASP20 2.7 0.0 1.0 CG A:ASP20 2.9 0.0 1.0 CD A:GLU31 2.9 0.0 1.0 H A:ASP22 3.3 0.0 1.0 HA A:ILE27 3.5 0.0 1.0 HB2 A:ASP22 3.5 0.0 1.0 CG A:ASP24 3.5 0.0 1.0 HG23 A:THR28 3.5 0.0 1.0 CG A:ASP22 3.6 0.0 1.0 C A:THR26 3.7 0.0 1.0 H A:ASP24 3.7 0.0 1.0 H A:THR28 3.8 0.0 1.0 H A:THR26 3.9 0.0 1.0 HG1 A:THR26 4.0 0.0 1.0 HG1 A:THR28 4.0 0.0 1.0 OD2 A:ASP24 4.0 0.0 1.0 CB A:ASP22 4.1 0.0 1.0 HA A:ASP20 4.1 0.0 1.0 H A:LYS21 4.1 0.0 1.0 OG1 A:THR26 4.2 0.0 1.0 N A:ASP22 4.3 0.0 1.0 CB A:ASP20 4.3 0.0 1.0 H A:GLY23 4.3 0.0 1.0 CA A:ILE27 4.4 0.0 1.0 CG A:GLU31 4.4 0.0 1.0 N A:ILE27 4.5 0.0 1.0 N A:THR28 4.6 0.0 1.0 CG2 A:THR28 4.6 0.0 1.0 CA A:THR26 4.7 0.0 1.0 OD1 A:ASP22 4.7 0.0 1.0 N A:ASP24 4.7 0.0 1.0 N A:THR26 4.7 0.0 1.0 CB A:ASP24 4.7 0.0 1.0 CA A:ASP22 4.7 0.0 1.0 HG21 A:ILE27 4.7 0.0 1.0 CA A:ASP20 4.8 0.0 1.0 N A:LYS21 4.8 0.0 1.0 HB3 A:ASP24 4.8 0.0 1.0 HG12 A:ILE27 4.8 0.0 1.0 HB2 A:ASP20 4.8 0.0 1.0 HG2 A:GLU31 4.8 0.0 1.0 C A:ILE27 4.9 0.0 1.0 N A:GLY23 4.9 0.0 1.0 HG3 A:GLU31 4.9 0.0 1.0 OG1 A:THR28 4.9 0.0 1.0 CB A:THR26 5.0 0.0 1.0 HB3 A:ASP20 5.0 0.0 1.0

Calcium binding site 2 out of 4 in the A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca152 b:0.0 occ:1.00 OD2 A:ASP58 2.4 0.0 1.0 OE1 A:GLU67 2.4 0.0 1.0 OD1 A:ASP64 2.5 0.0 1.0 O A:THR62 2.5 0.0 1.0 OD1 A:ASP56 2.5 0.0 1.0 OD2 A:ASP56 2.5 0.0 1.0 OD1 A:ASN60 2.6 0.0 1.0 OE2 A:GLU67 2.6 0.0 1.0 CG A:ASP56 2.8 0.0 1.0 CD A:GLU67 2.9 0.0 1.0 CG A:ASP58 3.3 0.0 1.0 H A:ASP64 3.4 0.0 1.0 H A:ASN60 3.6 0.0 1.0 OD1 A:ASP58 3.7 0.0 1.0 CG A:ASN60 3.7 0.0 1.0 CG A:ASP64 3.7 0.0 1.0 C A:THR62 3.7 0.0 1.0 H A:ASP58 3.7 0.0 1.0 HA A:ILE63 3.8 0.0 1.0 H A:THR62 3.9 0.0 1.0 H A:GLY59 3.9 0.0 1.0 H A:GLY61 4.0 0.0 1.0 HD22 A:ASN60 4.0 0.0 1.0 HA A:ASP56 4.0 0.0 1.0 HB2 A:ASP64 4.1 0.0 1.0 N A:ASP64 4.2 0.0 1.0 CB A:ASP56 4.2 0.0 1.0 N A:ASN60 4.2 0.0 1.0 ND2 A:ASN60 4.3 0.0 1.0 H A:ALA57 4.4 0.0 1.0 CG A:GLU67 4.4 0.0 1.0 N A:THR62 4.4 0.0 1.0 CB A:ASP64 4.5 0.0 1.0 OD2 A:ASP64 4.5 0.0 1.0 N A:ILE63 4.6 0.0 1.0 CA A:ILE63 4.6 0.0 1.0 CB A:ASP58 4.6 0.0 1.0 HG1 A:THR62 4.6 0.0 1.0 N A:ASP58 4.6 0.0 1.0 CA A:ASP56 4.6 0.0 1.0 HB2 A:ASP56 4.6 0.0 1.0 CA A:THR62 4.7 0.0 1.0 N A:GLY59 4.7 0.0 1.0 N A:GLY61 4.7 0.0 1.0 HB3 A:ASP58 4.7 0.0 1.0 HG3 A:GLU67 4.8 0.0 1.0 C A:ILE63 4.8 0.0 1.0 N A:ALA57 4.8 0.0 1.0 CA A:ASN60 4.8 0.0 1.0 CB A:ASN60 4.8 0.0 1.0 CA A:ASP58 4.9 0.0 1.0 HB3 A:ASP56 4.9 0.0 1.0 HG2 A:GLU67 4.9 0.0 1.0 HB2 A:ALA57 5.0 0.0 1.0 CA A:ASP64 5.0 0.0 1.0

Calcium binding site 3 out of 4 in the A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca153 b:0.0 occ:1.00 OD1 A:ASP93 2.4 0.0 1.0 OD1 A:ASP95 2.4 0.0 1.0 OE1 A:GLU104 2.4 0.0 1.0 OE2 A:GLU104 2.5 0.0 1.0 O A:TYR99 2.6 0.0 1.0 CD A:GLU104 2.9 0.0 1.0 CG A:ASP95 3.5 0.0 1.0 CG A:ASP93 3.5 0.0 1.0 H A:SER101 3.5 0.0 1.0 HA A:ILE100 3.7 0.0 1.0 H A:ASP95 3.8 0.0 1.0 C A:TYR99 3.8 0.0 1.0 OD2 A:ASP95 3.8 0.0 1.0 H A:LYS94 3.8 0.0 1.0 H A:TYR99 3.9 0.0 1.0 OD2 A:ASP93 4.0 0.0 1.0 H A:GLY96 4.1 0.0 1.0 HG A:SER101 4.1 0.0 1.0 CG A:GLU104 4.4 0.0 1.0 HA A:ASP93 4.4 0.0 1.0 N A:SER101 4.4 0.0 1.0 N A:LYS94 4.4 0.0 1.0 N A:TYR99 4.5 0.0 1.0 CA A:ILE100 4.5 0.0 1.0 HB3 A:SER101 4.6 0.0 1.0 N A:ILE100 4.6 0.0 1.0 CA A:TYR99 4.7 0.0 1.0 HB3 A:LYS94 4.7 0.0 1.0 N A:ASP95 4.7 0.0 1.0 CB A:ASP93 4.7 0.0 1.0 HB2 A:TYR99 4.8 0.0 1.0 H A:GLY98 4.8 0.0 1.0 CB A:ASP95 4.8 0.0 1.0 OE1 A:GLN135 4.8 0.0 1.0 HG2 A:GLU104 4.8 0.0 1.0 CA A:ASP93 4.9 0.0 1.0 C A:ASP93 4.9 0.0 1.0 C A:ILE100 4.9 0.0 1.0 HG3 A:GLU104 4.9 0.0 1.0 HB2 A:GLU104 5.0 0.0 1.0 H A:ASN97 5.0 0.0 1.0

Calcium binding site 4 out of 4 in the A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of A Coupled Equilibrium Shift Mechanism in Calmodulin- Mediated Signal Transduction within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca154 b:0.0 occ:1.00 OD1 A:ASP133 2.3 0.0 1.0 OE1 A:GLU140 2.4 0.0 1.0 OE2 A:GLU140 2.4 0.0 1.0 OD1 A:ASP129 2.4 0.0 1.0 OD1 A:ASP131 2.5 0.0 1.0 O A:GLN135 2.7 0.0 1.0 CD A:GLU140 2.8 0.0 1.0 CG A:ASP129 3.3 0.0 1.0 H A:ASP131 3.3 0.0 1.0 CG A:ASP133 3.4 0.0 1.0 CG A:ASP131 3.6 0.0 1.0 HA A:ASP129 3.6 0.0 1.0 OD2 A:ASP133 3.6 0.0 1.0 H A:ASP133 3.7 0.0 1.0 HB2 A:ASP131 3.7 0.0 1.0 C A:GLN135 3.8 0.0 1.0 HA A:VAL136 3.8 0.0 1.0 H A:ILE130 3.8 0.0 1.0 OD2 A:ASP129 3.9 0.0 1.0 H A:ASN137 4.1 0.0 1.0 CB A:ASP129 4.1 0.0 1.0 H A:GLN135 4.2 0.0 1.0 CB A:ASP131 4.2 0.0 1.0 H A:GLY132 4.2 0.0 1.0 N A:ASP131 4.2 0.0 1.0 HD21 A:ASN137 4.2 0.0 1.0 HB2 A:ASP129 4.3 0.0 1.0 CG A:GLU140 4.3 0.0 1.0 HB3 A:ASN137 4.3 0.0 1.0 CA A:ASP129 4.4 0.0 1.0 N A:ILE130 4.4 0.0 1.0 HB2 A:GLN135 4.4 0.0 1.0 ND2 A:ASN137 4.5 0.0 1.0 H A:GLY134 4.5 0.0 1.0 OD2 A:ASP131 4.5 0.0 1.0 N A:VAL136 4.6 0.0 1.0 N A:ASP133 4.6 0.0 1.0 CB A:ASP133 4.6 0.0 1.0 HG3 A:GLU140 4.7 0.0 1.0 CA A:VAL136 4.7 0.0 1.0 HB2 A:GLU140 4.7 0.0 1.0 C A:ASP129 4.7 0.0 1.0 CA A:GLN135 4.7 0.0 1.0 N A:GLN135 4.7 0.0 1.0 N A:ASN137 4.7 0.0 1.0 CA A:ASP131 4.8 0.0 1.0 HB A:ILE130 4.9 0.0 1.0 HG2 A:GLU140 4.9 0.0 1.0 HD22 A:ASN137 4.9 0.0 1.0 N A:GLY132 5.0 0.0 1.0 HB3 A:GLU140 5.0 0.0 1.0 HB3 A:ASP133 5.0 0.0 1.0

J.Gsponer, J.Christodoulou, A.Cavalli, J.M.Bui, B.Richter, C.M.Dobson, M.Vendruscolo. A Coupled Equilibrium Shift Mechanism in Calmodulin-Mediated Signal Transduction Structure V. 16 736 2008.
ISSN: ISSN 0969-2126
PubMed: 18462678
DOI: 10.1016/J.STR.2008.02.017