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Calcium in PDB 2k7d: uc(Nmr) Structure of CA2+-Bound CABP1 C-Domain

Calcium Binding Sites:

The binding sites of Calcium atom in the uc(Nmr) Structure of CA2+-Bound CABP1 C-Domain (pdb code 2k7d). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the uc(Nmr) Structure of CA2+-Bound CABP1 C-Domain, PDB code: 2k7d:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2k7d

Go back to Calcium Binding Sites List in 2k7d
Calcium binding site 1 out of 2 in the uc(Nmr) Structure of CA2+-Bound CABP1 C-Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Structure of CA2+-Bound CABP1 C-Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca501

b:0.0
occ:1.00
OD1 A:ASP112 1.7 0.0 1.0
OD2 A:ASP116 1.8 0.0 1.0
OE1 A:GLU123 1.9 0.0 1.0
OE2 A:GLU123 2.1 0.0 1.0
CD A:GLU123 2.1 0.0 1.0
OD1 A:ASP116 2.3 0.0 1.0
CG A:ASP116 2.3 0.0 1.0
CG A:ASP112 2.8 0.0 1.0
OD1 A:ASN114 2.8 0.0 1.0
O A:GLU118 2.8 0.0 1.0
HD22 A:ASN114 3.2 0.0 1.0
HA A:ASP112 3.3 0.0 1.0
H A:GLU118 3.4 0.0 1.0
OD2 A:ASP112 3.5 0.0 1.0
CG A:GLU123 3.5 0.0 1.0
CG A:ASN114 3.6 0.0 1.0
ND2 A:ASN114 3.7 0.0 1.0
HG2 A:GLU123 3.8 0.0 1.0
CB A:ASP116 3.8 0.0 1.0
H A:ASP116 3.8 0.0 1.0
CB A:ASP112 3.8 0.0 1.0
C A:GLU118 3.8 0.0 1.0
HA A:ILE119 4.0 0.0 1.0
HB2 A:ASP112 4.0 0.0 1.0
CA A:ASP112 4.1 0.0 1.0
HG3 A:GLU123 4.1 0.0 1.0
HB3 A:ASP116 4.2 0.0 1.0
H A:GLY115 4.2 0.0 1.0
N A:GLU118 4.2 0.0 1.0
H A:ASN114 4.3 0.0 1.0
N A:ASP116 4.3 0.0 1.0
HB2 A:ASP116 4.3 0.0 1.0
H A:SER120 4.4 0.0 1.0
HB3 A:GLU118 4.4 0.0 1.0
HB3 A:GLU123 4.5 0.0 1.0
CB A:GLU123 4.5 0.0 1.0
H A:GLY117 4.5 0.0 1.0
CA A:ASP116 4.6 0.0 1.0
CA A:GLU118 4.6 0.0 1.0
HB2 A:GLU123 4.6 0.0 1.0
HG2 A:GLU118 4.7 0.0 1.0
HD21 A:ASN114 4.7 0.0 1.0
HB3 A:ASP112 4.8 0.0 1.0
N A:ILE119 4.8 0.0 1.0
N A:GLY117 4.8 0.0 1.0
H A:THR113 4.8 0.0 1.0
C A:ASP116 4.8 0.0 1.0
CA A:ILE119 4.9 0.0 1.0
C A:ASP112 4.9 0.0 1.0
N A:GLY115 4.9 0.0 1.0
CB A:GLU118 5.0 0.0 1.0
CB A:ASN114 5.0 0.0 1.0

Calcium binding site 2 out of 2 in 2k7d

Go back to Calcium Binding Sites List in 2k7d
Calcium binding site 2 out of 2 in the uc(Nmr) Structure of CA2+-Bound CABP1 C-Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Structure of CA2+-Bound CABP1 C-Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca502

b:0.0
occ:1.00
HA A:LEU150 1.6 0.0 1.0
OE1 A:GLU160 1.7 0.0 1.0
CD A:GLU160 2.0 0.0 1.0
HG2 A:GLU160 2.2 0.0 1.0
H A:ASN151 2.5 0.0 1.0
CG A:GLU160 2.6 0.0 1.0
CA A:LEU150 2.6 0.0 1.0
OD1 A:ASN151 2.8 0.0 1.0
OD2 A:ASP153 2.8 0.0 1.0
OE2 A:GLU160 2.9 0.0 1.0
O A:ARG155 2.9 0.0 1.0
OD1 A:ASP149 2.9 0.0 1.0
H A:LEU150 2.9 0.0 1.0
N A:LEU150 3.0 0.0 1.0
N A:ASN151 3.2 0.0 1.0
HG3 A:GLU160 3.4 0.0 1.0
C A:LEU150 3.4 0.0 1.0
HB2 A:GLU160 3.5 0.0 1.0
CB A:GLU160 3.6 0.0 1.0
HB3 A:LEU150 3.7 0.0 1.0
OD2 A:ASP157 3.7 0.0 1.0
HA A:VAL156 3.7 0.0 1.0
CB A:LEU150 3.7 0.0 1.0
CG A:ASN151 3.9 0.0 1.0
CG A:ASP153 3.9 0.0 1.0
H A:ARG155 4.0 0.0 1.0
C A:ARG155 4.1 0.0 1.0
HB3 A:GLU160 4.1 0.0 1.0
OD1 A:ASP157 4.1 0.0 1.0
CG A:ASP157 4.1 0.0 1.0
CG A:ASP149 4.1 0.0 1.0
H A:ASP157 4.1 0.0 1.0
C A:ASP149 4.1 0.0 1.0
HG11 A:VAL148 4.2 0.0 1.0
HB2 A:LEU150 4.2 0.0 1.0
H A:GLY152 4.3 0.0 1.0
H A:ASP153 4.3 0.0 1.0
OD1 A:ASP153 4.4 0.0 1.0
HD22 A:ASN151 4.5 0.0 1.0
HD23 A:LEU150 4.5 0.0 1.0
HG21 A:VAL148 4.6 0.0 1.0
CA A:ASN151 4.6 0.0 1.0
ND2 A:ASN151 4.6 0.0 1.0
O A:LEU150 4.6 0.0 1.0
H A:GLU160 4.6 0.0 1.0
CA A:VAL156 4.6 0.0 1.0
N A:ASP157 4.8 0.0 1.0
N A:ARG155 4.8 0.0 1.0
O A:ASP149 4.8 0.0 1.0
CB A:ASN151 4.8 0.0 1.0
HB3 A:ASP149 4.8 0.0 1.0
N A:VAL156 4.9 0.0 1.0
CA A:GLU160 4.9 0.0 1.0
H A:ASP149 4.9 0.0 1.0
CB A:ASP149 4.9 0.0 1.0
CG A:LEU150 5.0 0.0 1.0
OD2 A:ASP149 5.0 0.0 1.0

Reference:

J.Ames, J.Ames. N/A N/A.
Page generated: Sat Dec 12 03:43:43 2020

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