Atomistry » Calcium » PDB 2jq6-2ksp » 2kne
Atomistry »
  Calcium »
    PDB 2jq6-2ksp »
      2kne »

Calcium in PDB 2kne: Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif

Calcium Binding Sites:

The binding sites of Calcium atom in the Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif (pdb code 2kne). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif, PDB code: 2kne:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 2kne

Go back to Calcium Binding Sites List in 2kne
Calcium binding site 1 out of 4 in the Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca151

b:0.0
occ:1.00
HA A:ASP20 2.6 0.0 1.0
OE1 A:GLU31 2.6 0.0 1.0
O A:THR26 2.6 0.0 1.0
OD1 A:ASP24 2.8 0.0 1.0
OD1 A:ASP20 2.8 0.0 1.0
OE2 A:GLU31 2.8 0.0 1.0
OD1 A:ASP22 2.9 0.0 1.0
H A:ASP24 3.1 0.0 1.0
CD A:GLU31 3.1 0.0 1.0
HB3 A:ASP20 3.1 0.0 1.0
CG A:ASP20 3.3 0.0 1.0
CA A:ASP20 3.4 0.0 1.0
CB A:ASP20 3.4 0.0 1.0
HA A:ILE27 3.5 0.0 1.0
H A:ASP22 3.5 0.0 1.0
CG A:ASP24 3.5 0.0 1.0
H A:LYS21 3.6 0.0 1.0
C A:THR26 3.7 0.0 1.0
H A:THR26 3.7 0.0 1.0
H A:GLY23 3.8 0.0 1.0
OD2 A:ASP24 3.8 0.0 1.0
C A:ASP20 3.9 0.0 1.0
N A:ASP24 4.0 0.0 1.0
H A:GLY25 4.0 0.0 1.0
N A:LYS21 4.0 0.0 1.0
HA2 A:GLY23 4.0 0.0 1.0
CG A:ASP22 4.1 0.0 1.0
N A:GLY23 4.1 0.0 1.0
H A:THR28 4.2 0.0 1.0
N A:ASP22 4.3 0.0 1.0
HG13 A:ILE27 4.3 0.0 1.0
OD2 A:ASP20 4.3 0.0 1.0
N A:THR26 4.3 0.0 1.0
CA A:ILE27 4.4 0.0 1.0
HG1 A:THR28 4.4 0.0 1.0
N A:ILE27 4.5 0.0 1.0
CA A:GLY23 4.5 0.0 1.0
HB2 A:ASP20 4.5 0.0 1.0
HD1 A:PHE19 4.6 0.0 1.0
CG A:GLU31 4.6 0.0 1.0
N A:ASP20 4.6 0.0 1.0
N A:GLY25 4.6 0.0 1.0
C A:ASP22 4.7 0.0 1.0
OD2 A:ASP22 4.7 0.0 1.0
CA A:THR26 4.7 0.0 1.0
CB A:ASP24 4.7 0.0 1.0
C A:GLY23 4.7 0.0 1.0
O A:PHE19 4.8 0.0 1.0
CA A:ASP24 4.8 0.0 1.0
O A:ASP20 4.8 0.0 1.0
HB3 A:GLU31 4.9 0.0 1.0
CA A:ASP22 4.9 0.0 1.0
N A:THR28 5.0 0.0 1.0

Calcium binding site 2 out of 4 in 2kne

Go back to Calcium Binding Sites List in 2kne
Calcium binding site 2 out of 4 in the Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca152

b:0.0
occ:1.00
HD22 A:ASN60 2.2 0.0 1.0
O A:THR62 2.6 0.0 1.0
OD1 A:ASP58 2.7 0.0 1.0
OE2 A:GLU67 2.7 0.0 1.0
OE1 A:GLU67 2.7 0.0 1.0
OD2 A:ASP58 2.7 0.0 1.0
ND2 A:ASN60 2.8 0.0 1.0
OD1 A:ASN60 2.8 0.0 1.0
CG A:ASP58 2.9 0.0 1.0
CD A:GLU67 2.9 0.0 1.0
OD1 A:ASP56 3.0 0.0 1.0
H A:ASP64 3.0 0.0 1.0
CG A:ASN60 3.1 0.0 1.0
HA A:ILE63 3.1 0.0 1.0
HD21 A:ASN60 3.5 0.0 1.0
OD1 A:ASP64 3.6 0.0 1.0
C A:THR62 3.7 0.0 1.0
H A:ASP58 3.7 0.0 1.0
CG A:ASP64 3.7 0.0 1.0
N A:ASP64 3.7 0.0 1.0
HB3 A:ASP64 3.9 0.0 1.0
CA A:ILE63 4.0 0.0 1.0
OD2 A:ASP64 4.0 0.0 1.0
HB3 A:ASP58 4.1 0.0 1.0
CG A:ASP56 4.1 0.0 1.0
CB A:ASP58 4.1 0.0 1.0
H A:ASN60 4.1 0.0 1.0
HG1 A:THR62 4.1 0.0 1.0
H A:THR62 4.1 0.0 1.0
CG A:GLU67 4.2 0.0 1.0
C A:ILE63 4.3 0.0 1.0
N A:ILE63 4.3 0.0 1.0
HA A:ASP56 4.3 0.0 1.0
CB A:ASP64 4.3 0.0 1.0
HG3 A:GLU67 4.3 0.0 1.0
HD11 A:ILE63 4.3 0.0 1.0
CB A:ASN60 4.4 0.0 1.0
HB3 A:ASN60 4.5 0.0 1.0
OG1 A:THR62 4.5 0.0 1.0
HB2 A:GLU67 4.5 0.0 1.0
HD12 A:ILE63 4.5 0.0 1.0
N A:ASP58 4.5 0.0 1.0
OD2 A:ASP56 4.6 0.0 1.0
CA A:ASP64 4.7 0.0 1.0
CA A:THR62 4.8 0.0 1.0
N A:THR62 4.8 0.0 1.0
HB2 A:ASP58 4.8 0.0 1.0
CA A:ASP58 4.9 0.0 1.0
H A:ALA57 4.9 0.0 1.0
HG21 A:ILE63 4.9 0.0 1.0
CB A:GLU67 4.9 0.0 1.0
CD1 A:ILE63 4.9 0.0 1.0
N A:ASN60 4.9 0.0 1.0
HG2 A:GLU67 5.0 0.0 1.0

Calcium binding site 3 out of 4 in 2kne

Go back to Calcium Binding Sites List in 2kne
Calcium binding site 3 out of 4 in the Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca153

b:0.0
occ:1.00
HD22 A:ASN97 2.4 0.0 1.0
O A:TYR99 2.6 0.0 1.0
OE2 A:GLU104 2.6 0.0 1.0
OD1 A:ASP95 2.6 0.0 1.0
ND2 A:ASN97 2.7 0.0 1.0
OD1 A:ASN97 2.7 0.0 1.0
OD1 A:ASP93 2.8 0.0 1.0
OE1 A:GLU104 2.8 0.0 1.0
CG A:ASN97 2.9 0.0 1.0
CD A:GLU104 3.0 0.0 1.0
HB2 A:SER101 3.1 0.0 1.0
H A:SER101 3.2 0.0 1.0
CG A:ASP95 3.4 0.0 1.0
HD21 A:ASN97 3.4 0.0 1.0
HA A:ASP93 3.4 0.0 1.0
H A:ASN97 3.4 0.0 1.0
H A:ASP95 3.5 0.0 1.0
OD2 A:ASP95 3.6 0.0 1.0
C A:TYR99 3.8 0.0 1.0
HA A:ILE100 3.8 0.0 1.0
CG A:ASP93 3.9 0.0 1.0
N A:SER101 3.9 0.0 1.0
H A:TYR99 4.0 0.0 1.0
CB A:SER101 4.0 0.0 1.0
H A:LYS94 4.1 0.0 1.0
HB3 A:ASN97 4.1 0.0 1.0
HB3 A:SER101 4.1 0.0 1.0
CB A:ASN97 4.1 0.0 1.0
CA A:ASP93 4.3 0.0 1.0
N A:ASN97 4.3 0.0 1.0
CG A:GLU104 4.4 0.0 1.0
N A:ASP95 4.4 0.0 1.0
N A:LYS94 4.4 0.0 1.0
H A:GLY96 4.4 0.0 1.0
HB2 A:TYR99 4.4 0.0 1.0
HG3 A:GLU104 4.5 0.0 1.0
CA A:ILE100 4.5 0.0 1.0
CA A:SER101 4.6 0.0 1.0
C A:ILE100 4.6 0.0 1.0
N A:ILE100 4.6 0.0 1.0
C A:ASP93 4.6 0.0 1.0
OD2 A:ASP93 4.6 0.0 1.0
N A:TYR99 4.7 0.0 1.0
CA A:TYR99 4.7 0.0 1.0
CB A:ASP93 4.7 0.0 1.0
CB A:ASP95 4.7 0.0 1.0
CA A:ASN97 4.8 0.0 1.0
HB3 A:LYS94 4.8 0.0 1.0
N A:GLY96 4.8 0.0 1.0
HB2 A:ASN97 4.9 0.0 1.0
HG2 A:GLU104 4.9 0.0 1.0
O A:PHE92 5.0 0.0 1.0

Calcium binding site 4 out of 4 in 2kne

Go back to Calcium Binding Sites List in 2kne
Calcium binding site 4 out of 4 in the Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca154

b:0.0
occ:1.00
O A:GLN135 2.5 0.0 1.0
OD1 A:ASP131 2.6 0.0 1.0
OE2 A:GLU140 2.6 0.0 1.0
OD2 A:ASP133 2.6 0.0 1.0
OD1 A:ASP133 2.7 0.0 1.0
OD1 A:ASP129 2.7 0.0 1.0
OE1 A:GLU140 2.8 0.0 1.0
CG A:ASP133 2.9 0.0 1.0
CD A:GLU140 2.9 0.0 1.0
HA A:ASP129 3.3 0.0 1.0
HA A:VAL136 3.5 0.0 1.0
H A:ASN137 3.6 0.0 1.0
CG A:ASP131 3.6 0.0 1.0
H A:ASP131 3.7 0.0 1.0
O A:ASP131 3.8 0.0 1.0
C A:GLN135 3.8 0.0 1.0
CG A:ASP129 3.9 0.0 1.0
H A:GLN135 3.9 0.0 1.0
H A:ILE130 3.9 0.0 1.0
OD2 A:ASP131 4.0 0.0 1.0
HG23 A:ILE130 4.0 0.0 1.0
H A:ASP133 4.0 0.0 1.0
CB A:ASP133 4.2 0.0 1.0
CA A:ASP129 4.3 0.0 1.0
CG A:GLU140 4.3 0.0 1.0
HB3 A:ASP133 4.3 0.0 1.0
CA A:VAL136 4.4 0.0 1.0
N A:ASN137 4.4 0.0 1.0
HB2 A:ASN137 4.4 0.0 1.0
HG3 A:GLU140 4.4 0.0 1.0
N A:ILE130 4.5 0.0 1.0
N A:ASP131 4.5 0.0 1.0
N A:VAL136 4.6 0.0 1.0
N A:GLN135 4.6 0.0 1.0
CB A:ASP129 4.7 0.0 1.0
C A:ASP131 4.7 0.0 1.0
C A:ASP129 4.7 0.0 1.0
CA A:GLN135 4.8 0.0 1.0
OD2 A:ASP129 4.8 0.0 1.0
H A:GLY134 4.8 0.0 1.0
N A:ASP133 4.8 0.0 1.0
HB3 A:ASN137 4.9 0.0 1.0
C A:VAL136 4.9 0.0 1.0
HB2 A:GLU140 4.9 0.0 1.0
HB2 A:ASP133 4.9 0.0 1.0
CB A:ASP131 4.9 0.0 1.0
O A:ALA128 4.9 0.0 1.0
HG2 A:GLU140 5.0 0.0 1.0
HB2 A:GLN135 5.0 0.0 1.0
HB2 A:ASP129 5.0 0.0 1.0
CA A:ASP131 5.0 0.0 1.0

Reference:

N.Juranic, E.Atanasova, A.G.Filoteo, S.Macura, F.G.Prendergast, J.T.Penniston, E.E.Strehler. Calmodulin Wraps Around Its Binding Domain in the Plasma Membrane CA2+ Pump Anchored By A Novel 18-1 Motif. J.Biol.Chem. V. 285 4015 2010.
ISSN: ISSN 0021-9258
PubMed: 19996092
DOI: 10.1074/JBC.M109.060491
Page generated: Sat Dec 12 03:44:20 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy