Calcium in PDB 2kyf: Solution Structure of Calcium-Bound CPV3

The binding sites of Calcium atom in the Solution Structure of Calcium-Bound CPV3 (pdb code 2kyf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure of Calcium-Bound CPV3, PDB code: 2kyf:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Solution Structure of Calcium-Bound CPV3


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of Calcium-Bound CPV3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca109 b:72.5 occ:1.00 HB2 A:ASP53 2.1 52.1 1.0 OD1 A:ASP51 2.2 52.4 1.0 OE2 A:GLU62 2.2 61.4 1.0 OD2 A:ASP53 2.4 71.1 1.0 O A:PHE57 2.4 31.2 1.0 HG A:SER55 2.5 1.1 1.0 OE2 A:GLU59 2.6 44.5 1.0 OE1 A:GLU62 2.7 61.1 1.0 OG A:SER55 2.7 34.1 1.0 CD A:GLU62 2.8 32.1 1.0 CB A:ASP53 2.9 51.1 1.0 CG A:ASP53 2.9 73.0 1.0 H A:ASP53 3.0 33.2 1.0 H A:SER55 3.2 75.1 1.0 CG A:ASP51 3.5 41.0 1.0 N A:ASP53 3.5 54.1 1.0 HA A:ASP51 3.6 13.4 1.0 HA A:ILE58 3.6 15.3 1.0 CD A:GLU59 3.6 12.2 1.0 C A:PHE57 3.6 71.4 1.0 H A:PHE57 3.6 24.4 1.0 H A:GLU59 3.6 12.3 1.0 CA A:ASP53 3.7 52.1 1.0 HB3 A:ASP53 3.7 50.1 1.0 H A:GLN54 3.8 14.4 1.0 H A:GLY56 3.8 45.2 1.0 H A:ASN52 4.0 4.2 1.0 OD1 A:ASP53 4.0 1.1 1.0 CB A:SER55 4.1 62.2 1.0 OD2 A:ASP51 4.1 52.3 1.0 N A:SER55 4.1 32.2 1.0 OE1 A:GLU59 4.1 31.1 1.0 N A:GLN54 4.1 31.1 1.0 C A:ASP53 4.2 70.5 1.0 CG A:GLU62 4.3 63.3 1.0 N A:ASN52 4.3 32.5 1.0 CA A:ASP51 4.3 72.3 1.0 N A:PHE57 4.3 52.3 1.0 CB A:ASP51 4.5 11.2 1.0 CA A:ILE58 4.5 32.4 1.0 N A:ILE58 4.5 41.3 1.0 C A:ASP51 4.5 14.2 1.0 HG3 A:GLU59 4.5 42.5 1.0 CA A:PHE57 4.6 14.4 1.0 N A:GLU59 4.6 5.5 1.0 HB2 A:SER55 4.6 14.5 1.0 C A:ASN52 4.6 52.4 1.0 HG2 A:GLU62 4.6 34.1 1.0 HA A:ASP53 4.7 12.2 1.0 HB3 A:SER55 4.7 40.0 1.0 N A:GLY56 4.7 4.5 1.0 CA A:SER55 4.7 63.0 1.0 CG A:GLU59 4.7 14.2 1.0 HG3 A:GLU62 4.7 63.1 1.0 HB2 A:PHE57 4.7 23.0 1.0 HB2 A:ASP51 4.8 64.0 1.0

Calcium binding site 2 out of 2 in the Solution Structure of Calcium-Bound CPV3


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of Calcium-Bound CPV3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca110 b:41.0 occ:1.00 OD1 A:ASP90 2.2 51.2 1.0 OE2 A:GLU101 2.3 64.2 1.0 OD2 A:ASP94 2.5 73.1 1.0 OD2 A:ASP92 2.5 54.3 1.0 O A:LYS96 2.7 74.2 1.0 OE1 A:GLU101 2.7 2.0 1.0 CD A:GLU101 2.8 33.4 1.0 HB2 A:ASP92 3.3 21.4 1.0 HG2 A:LYS96 3.4 62.3 1.0 CG A:ASP90 3.5 21.1 1.0 CG A:ASP92 3.6 72.1 1.0 CG A:ASP94 3.6 62.4 1.0 HA A:ASP90 3.6 12.5 1.0 HB2 A:ASP94 3.6 30.3 1.0 C A:LYS96 3.9 2.2 1.0 HA A:ILE97 3.9 54.1 1.0 CB A:ASP92 3.9 32.0 1.0 HB2 A:ASP90 4.1 62.1 1.0 HD2 A:PHE57 4.1 21.1 1.0 H A:LYS96 4.1 23.0 1.0 CB A:ASP94 4.2 21.1 1.0 CB A:ASP90 4.2 75.4 1.0 HG3 A:LYS96 4.3 10.2 1.0 CG A:GLU101 4.3 11.2 1.0 H A:GLY98 4.3 62.3 1.0 CG A:LYS96 4.3 51.4 1.0 OD2 A:ASP90 4.3 2.2 1.0 CA A:ASP90 4.3 4.2 1.0 HE2 A:PHE57 4.4 42.5 1.0 HB3 A:ASP92 4.5 64.3 1.0 OD1 A:ASP94 4.5 20.3 1.0 N A:GLY98 4.5 11.5 1.0 HG3 A:GLU101 4.6 5.0 1.0 H A:ASP92 4.6 20.2 1.0 CA A:ILE97 4.7 0.2 1.0 CD2 A:PHE57 4.7 73.2 1.0 H A:ASP94 4.7 3.3 1.0 OD1 A:ASP92 4.7 21.5 1.0 HA3 A:GLY98 4.7 24.1 1.0 N A:ILE97 4.7 3.3 1.0 C A:ILE97 4.8 53.4 1.0 HB3 A:GLU101 4.8 65.4 1.0 O A:ASP90 4.8 70.1 1.0 CE2 A:PHE57 4.8 3.1 1.0 HG2 A:GLU101 4.8 10.3 1.0 HB3 A:ASP94 4.8 73.3 1.0 CA A:LYS96 4.9 60.3 1.0 N A:LYS96 4.9 40.3 1.0 C A:ASP90 4.9 23.4 1.0

M.T.Henzl, J.J.Tanner, A.Tan. Solution Structures of Chicken Parvalbumin 3 in the Ca(2+)-Free and Ca(2+)-Bound States. Proteins V. 79 752 2011.
ISSN: ISSN 0887-3585
PubMed: 21287610
DOI: 10.1002/PROT.22915