Calcium in PDB 2kz2: Calmodulin, C-Terminal Domain, F92E Mutant
Calcium Binding Sites:
The binding sites of Calcium atom in the Calmodulin, C-Terminal Domain, F92E Mutant
(pdb code 2kz2). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Calmodulin, C-Terminal Domain, F92E Mutant, PDB code: 2kz2:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 2kz2
Go back to
Calcium Binding Sites List in 2kz2
Calcium binding site 1 out
of 2 in the Calmodulin, C-Terminal Domain, F92E Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Calmodulin, C-Terminal Domain, F92E Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca149
b:0.0
occ:1.00
|
HA
|
A:ASP93
|
2.1
|
0.0
|
1.0
|
O
|
A:TYR99
|
2.3
|
0.0
|
1.0
|
OD1
|
A:ASN97
|
2.4
|
0.0
|
1.0
|
OE2
|
A:GLU104
|
2.4
|
0.0
|
1.0
|
OD1
|
A:ASP93
|
2.5
|
0.0
|
1.0
|
OE1
|
A:GLU104
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP95
|
2.6
|
0.0
|
1.0
|
CD
|
A:GLU104
|
2.8
|
0.0
|
1.0
|
HD22
|
A:ASN97
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASN97
|
3.1
|
0.0
|
1.0
|
H
|
A:TYR99
|
3.1
|
0.0
|
1.0
|
CA
|
A:ASP93
|
3.2
|
0.0
|
1.0
|
ND2
|
A:ASN97
|
3.2
|
0.0
|
1.0
|
CG
|
A:ASP93
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASP95
|
3.4
|
0.0
|
1.0
|
C
|
A:TYR99
|
3.5
|
0.0
|
1.0
|
OD2
|
A:ASP95
|
3.6
|
0.0
|
1.0
|
HD13
|
A:ILE100
|
3.6
|
0.0
|
1.0
|
CB
|
A:ASP93
|
3.6
|
0.0
|
1.0
|
O
|
A:GLU92
|
3.6
|
0.0
|
1.0
|
HA
|
A:ILE100
|
3.7
|
0.0
|
1.0
|
H
|
A:ASN97
|
3.7
|
0.0
|
1.0
|
HB2
|
A:ASP93
|
3.7
|
0.0
|
1.0
|
H
|
A:ASP95
|
3.8
|
0.0
|
1.0
|
H
|
A:GLY98
|
3.9
|
0.0
|
1.0
|
N
|
A:TYR99
|
3.9
|
0.0
|
1.0
|
C
|
A:ASP93
|
4.0
|
0.0
|
1.0
|
N
|
A:ASP93
|
4.1
|
0.0
|
1.0
|
H
|
A:LYS94
|
4.1
|
0.0
|
1.0
|
HD21
|
A:ASN97
|
4.1
|
0.0
|
1.0
|
C
|
A:GLU92
|
4.2
|
0.0
|
1.0
|
OD2
|
A:ASP93
|
4.3
|
0.0
|
1.0
|
CG
|
A:GLU104
|
4.3
|
0.0
|
1.0
|
CA
|
A:TYR99
|
4.3
|
0.0
|
1.0
|
H
|
A:SER101
|
4.3
|
0.0
|
1.0
|
N
|
A:LYS94
|
4.3
|
0.0
|
1.0
|
HD11
|
A:ILE100
|
4.3
|
0.0
|
1.0
|
H
|
A:GLY96
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASN97
|
4.4
|
0.0
|
1.0
|
N
|
A:ASN97
|
4.4
|
0.0
|
1.0
|
CD1
|
A:ILE100
|
4.4
|
0.0
|
1.0
|
N
|
A:ILE100
|
4.4
|
0.0
|
1.0
|
N
|
A:GLY98
|
4.5
|
0.0
|
1.0
|
CA
|
A:ILE100
|
4.5
|
0.0
|
1.0
|
HB2
|
A:TYR99
|
4.6
|
0.0
|
1.0
|
HB3
|
A:ASN97
|
4.6
|
0.0
|
1.0
|
N
|
A:ASP95
|
4.6
|
0.0
|
1.0
|
HB3
|
A:ASP93
|
4.7
|
0.0
|
1.0
|
O
|
A:ASP93
|
4.7
|
0.0
|
1.0
|
HG2
|
A:GLU104
|
4.8
|
0.0
|
1.0
|
HG2
|
A:LYS94
|
4.8
|
0.0
|
1.0
|
HG3
|
A:GLU104
|
4.8
|
0.0
|
1.0
|
N
|
A:GLY96
|
4.8
|
0.0
|
1.0
|
CB
|
A:ASP95
|
4.8
|
0.0
|
1.0
|
HG
|
A:SER101
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASN97
|
4.9
|
0.0
|
1.0
|
H
|
A:ASP93
|
4.9
|
0.0
|
1.0
|
HD12
|
A:ILE100
|
4.9
|
0.0
|
1.0
|
HB2
|
A:GLU104
|
5.0
|
0.0
|
1.0
|
HB3
|
A:GLU104
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 2kz2
Go back to
Calcium Binding Sites List in 2kz2
Calcium binding site 2 out
of 2 in the Calmodulin, C-Terminal Domain, F92E Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Calmodulin, C-Terminal Domain, F92E Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca150
b:0.0
occ:1.00
|
OD1
|
A:ASP131
|
2.2
|
0.0
|
1.0
|
OD1
|
A:ASP129
|
2.2
|
0.0
|
1.0
|
OD2
|
A:ASP131
|
2.2
|
0.0
|
1.0
|
O
|
A:GLN135
|
2.3
|
0.0
|
1.0
|
OE1
|
A:GLU140
|
2.5
|
0.0
|
1.0
|
CG
|
A:ASP131
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP133
|
2.6
|
0.0
|
1.0
|
HA
|
A:VAL136
|
2.7
|
0.0
|
1.0
|
OE2
|
A:GLU140
|
2.7
|
0.0
|
1.0
|
CD
|
A:GLU140
|
2.8
|
0.0
|
1.0
|
OD2
|
A:ASP133
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP133
|
3.0
|
0.0
|
1.0
|
H
|
A:ASN137
|
3.2
|
0.0
|
1.0
|
CG
|
A:ASP129
|
3.2
|
0.0
|
1.0
|
C
|
A:GLN135
|
3.4
|
0.0
|
1.0
|
OD2
|
A:ASP129
|
3.5
|
0.0
|
1.0
|
CA
|
A:VAL136
|
3.7
|
0.0
|
1.0
|
H
|
A:ASP131
|
3.7
|
0.0
|
1.0
|
H
|
A:ASP133
|
3.9
|
0.0
|
1.0
|
N
|
A:ASN137
|
4.0
|
0.0
|
1.0
|
N
|
A:VAL136
|
4.0
|
0.0
|
1.0
|
CB
|
A:ASP131
|
4.0
|
0.0
|
1.0
|
HB3
|
A:GLU140
|
4.0
|
0.0
|
1.0
|
CG
|
A:GLU140
|
4.1
|
0.0
|
1.0
|
HB2
|
A:GLU140
|
4.1
|
0.0
|
1.0
|
H
|
A:GLN135
|
4.2
|
0.0
|
1.0
|
HA
|
A:ASP129
|
4.2
|
0.0
|
1.0
|
HG21
|
A:VAL136
|
4.3
|
0.0
|
1.0
|
C
|
A:VAL136
|
4.3
|
0.0
|
1.0
|
CB
|
A:GLU140
|
4.3
|
0.0
|
1.0
|
HG13
|
A:VAL136
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASP133
|
4.4
|
0.0
|
1.0
|
HB3
|
A:ASP131
|
4.4
|
0.0
|
1.0
|
N
|
A:ASP131
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASP129
|
4.5
|
0.0
|
1.0
|
HG3
|
A:GLU140
|
4.6
|
0.0
|
1.0
|
H
|
A:ILE130
|
4.6
|
0.0
|
1.0
|
HB2
|
A:ASP131
|
4.6
|
0.0
|
1.0
|
HB2
|
A:ASN137
|
4.6
|
0.0
|
1.0
|
HB3
|
A:ASP133
|
4.6
|
0.0
|
1.0
|
CA
|
A:GLN135
|
4.7
|
0.0
|
1.0
|
N
|
A:GLN135
|
4.7
|
0.0
|
1.0
|
CG
|
A:ASN137
|
4.7
|
0.0
|
1.0
|
N
|
A:ASP133
|
4.7
|
0.0
|
1.0
|
CB
|
A:VAL136
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASP131
|
4.8
|
0.0
|
1.0
|
OD1
|
A:ASN137
|
4.8
|
0.0
|
1.0
|
HB2
|
A:ASP129
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASP129
|
4.8
|
0.0
|
1.0
|
HG2
|
A:GLU140
|
4.9
|
0.0
|
1.0
|
ND2
|
A:ASN137
|
4.9
|
0.0
|
1.0
|
H
|
A:GLY132
|
4.9
|
0.0
|
1.0
|
CG1
|
A:VAL136
|
5.0
|
0.0
|
1.0
|
CG2
|
A:VAL136
|
5.0
|
0.0
|
1.0
|
H
|
A:VAL136
|
5.0
|
0.0
|
1.0
|
N
|
A:ILE130
|
5.0
|
0.0
|
1.0
|
|
Reference:
I.V.Korendovych,
D.W.Kulp,
Y.Wu,
H.Cheng,
H.Roder,
W.F.Degrado.
Design of A Switchable Eliminase. Proc.Natl.Acad.Sci.Usa V. 108 6823 2011.
ISSN: ISSN 0027-8424
PubMed: 21482808
DOI: 10.1073/PNAS.1018191108
Page generated: Fri Jul 12 14:02:40 2024
|