Calcium in PDB 2lmu: Androcam at High Calcium
Calcium Binding Sites:
The binding sites of Calcium atom in the Androcam at High Calcium
(pdb code 2lmu). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Androcam at High Calcium, PDB code: 2lmu:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 2lmu
Go back to
Calcium Binding Sites List in 2lmu
Calcium binding site 1 out
of 2 in the Androcam at High Calcium
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Androcam at High Calcium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca149
b:22.2
occ:1.00
|
HB2
|
A:ASP95
|
2.1
|
22.8
|
1.0
|
OD1
|
A:ASP93
|
2.3
|
20.0
|
1.0
|
O
|
A:PHE99
|
2.3
|
21.1
|
1.0
|
OD1
|
A:ASP97
|
2.4
|
22.7
|
1.0
|
OE2
|
A:GLU104
|
2.5
|
22.6
|
1.0
|
OD2
|
A:ASP95
|
2.5
|
24.3
|
1.0
|
OE1
|
A:GLU104
|
2.5
|
22.7
|
1.0
|
CD
|
A:GLU104
|
2.8
|
22.8
|
1.0
|
H
|
A:ASP95
|
3.0
|
21.7
|
1.0
|
CB
|
A:ASP95
|
3.0
|
23.3
|
1.0
|
HA
|
A:ILE100
|
3.1
|
21.0
|
1.0
|
CG
|
A:ASP95
|
3.1
|
23.9
|
1.0
|
CG
|
A:ASP97
|
3.4
|
22.7
|
1.0
|
CG
|
A:ASP93
|
3.5
|
19.6
|
1.0
|
C
|
A:PHE99
|
3.6
|
20.6
|
1.0
|
N
|
A:ASP95
|
3.7
|
22.1
|
1.0
|
CA
|
A:ASP95
|
3.8
|
22.6
|
1.0
|
HB3
|
A:ASP95
|
3.8
|
23.9
|
1.0
|
OD2
|
A:ASP97
|
3.9
|
22.4
|
1.0
|
H
|
A:PHE99
|
4.0
|
20.9
|
1.0
|
HA
|
A:ASP93
|
4.0
|
19.8
|
1.0
|
CA
|
A:ILE100
|
4.1
|
20.7
|
1.0
|
OD2
|
A:ASP93
|
4.1
|
19.9
|
1.0
|
H
|
A:SER101
|
4.2
|
22.3
|
1.0
|
C
|
A:ASP95
|
4.2
|
21.8
|
1.0
|
O
|
A:ASP95
|
4.2
|
20.8
|
1.0
|
N
|
A:ILE100
|
4.3
|
20.4
|
1.0
|
H
|
A:ASP97
|
4.3
|
22.7
|
1.0
|
OD1
|
A:ASP95
|
4.3
|
24.0
|
1.0
|
CG
|
A:GLU104
|
4.3
|
23.2
|
1.0
|
H
|
A:GLY98
|
4.4
|
20.8
|
1.0
|
HE1
|
A:MET135
|
4.5
|
23.5
|
1.0
|
H
|
A:ARG94
|
4.5
|
21.1
|
1.0
|
HE2
|
A:MET135
|
4.5
|
23.7
|
1.0
|
HG12
|
A:ILE100
|
4.5
|
18.9
|
1.0
|
N
|
A:PHE99
|
4.6
|
20.4
|
1.0
|
N
|
A:ARG94
|
4.7
|
20.9
|
1.0
|
CB
|
A:ASP93
|
4.7
|
18.7
|
1.0
|
CA
|
A:ASP93
|
4.7
|
19.2
|
1.0
|
CA
|
A:PHE99
|
4.7
|
20.4
|
1.0
|
CB
|
A:ASP97
|
4.7
|
23.4
|
1.0
|
HB3
|
A:ASP97
|
4.7
|
24.1
|
1.0
|
N
|
A:SER101
|
4.7
|
22.4
|
1.0
|
HG22
|
A:ILE100
|
4.7
|
20.4
|
1.0
|
C
|
A:ASP93
|
4.7
|
19.9
|
1.0
|
HA
|
A:ASP95
|
4.8
|
23.1
|
1.0
|
HG3
|
A:GLU104
|
4.8
|
23.9
|
1.0
|
HG2
|
A:GLU104
|
4.8
|
23.5
|
1.0
|
C
|
A:ILE100
|
4.8
|
21.6
|
1.0
|
C
|
A:ARG94
|
4.9
|
22.1
|
1.0
|
HB2
|
A:PHE99
|
4.9
|
22.1
|
1.0
|
CE
|
A:MET135
|
4.9
|
23.8
|
1.0
|
HE3
|
A:MET135
|
5.0
|
23.9
|
1.0
|
OG
|
A:SER101
|
5.0
|
24.6
|
1.0
|
N
|
A:ASP97
|
5.0
|
22.4
|
1.0
|
|
Calcium binding site 2 out
of 2 in 2lmu
Go back to
Calcium Binding Sites List in 2lmu
Calcium binding site 2 out
of 2 in the Androcam at High Calcium
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Androcam at High Calcium within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca150
b:22.2
occ:1.00
|
OD1
|
A:ASP129
|
2.3
|
24.4
|
1.0
|
O
|
A:MET135
|
2.3
|
21.6
|
1.0
|
OD1
|
A:ASP133
|
2.4
|
24.3
|
1.0
|
OE1
|
A:GLU140
|
2.5
|
20.5
|
1.0
|
OD1
|
A:ASP131
|
2.5
|
23.5
|
1.0
|
OE2
|
A:GLU140
|
2.5
|
20.8
|
1.0
|
CD
|
A:GLU140
|
2.7
|
20.1
|
1.0
|
OD2
|
A:ASP131
|
3.1
|
22.5
|
1.0
|
CG
|
A:ASP133
|
3.1
|
24.9
|
1.0
|
CG
|
A:ASP131
|
3.1
|
23.3
|
1.0
|
OD2
|
A:ASP133
|
3.1
|
24.6
|
1.0
|
H
|
A:MET135
|
3.4
|
23.8
|
1.0
|
C
|
A:MET135
|
3.4
|
21.6
|
1.0
|
CG
|
A:ASP129
|
3.4
|
23.8
|
1.0
|
HA
|
A:ASP129
|
3.5
|
21.4
|
1.0
|
HB2
|
A:ASP129
|
3.8
|
22.5
|
1.0
|
HA
|
A:ILE136
|
3.8
|
19.6
|
1.0
|
H
|
A:GLY132
|
3.8
|
24.8
|
1.0
|
H
|
A:ASP133
|
3.8
|
25.6
|
1.0
|
HB2
|
A:MET135
|
3.9
|
23.0
|
1.0
|
CG
|
A:GLU140
|
4.0
|
18.8
|
1.0
|
CB
|
A:ASP129
|
4.0
|
22.9
|
1.0
|
HG3
|
A:GLU140
|
4.1
|
18.5
|
1.0
|
N
|
A:MET135
|
4.1
|
23.7
|
1.0
|
HD13
|
A:ILE136
|
4.1
|
19.7
|
1.0
|
CA
|
A:MET135
|
4.2
|
22.7
|
1.0
|
CA
|
A:ASP129
|
4.2
|
22.1
|
1.0
|
H
|
A:PHE130
|
4.3
|
21.6
|
1.0
|
H
|
A:ASP131
|
4.4
|
23.0
|
1.0
|
N
|
A:ILE136
|
4.4
|
20.6
|
1.0
|
N
|
A:ASP133
|
4.5
|
26.3
|
1.0
|
OD2
|
A:ASP129
|
4.5
|
24.0
|
1.0
|
CB
|
A:ASP133
|
4.5
|
26.1
|
1.0
|
H
|
A:ASN137
|
4.5
|
18.4
|
1.0
|
H
|
A:GLY134
|
4.6
|
25.4
|
1.0
|
CA
|
A:ILE136
|
4.6
|
19.5
|
1.0
|
HG2
|
A:GLU140
|
4.6
|
18.7
|
1.0
|
CB
|
A:ASP131
|
4.6
|
24.2
|
1.0
|
CB
|
A:MET135
|
4.6
|
23.0
|
1.0
|
N
|
A:GLY132
|
4.7
|
25.6
|
1.0
|
N
|
A:PHE130
|
4.8
|
22.4
|
1.0
|
N
|
A:GLY134
|
4.9
|
25.7
|
1.0
|
C
|
A:ASP129
|
4.9
|
22.8
|
1.0
|
N
|
A:ASP131
|
4.9
|
23.8
|
1.0
|
CA
|
A:ASP133
|
4.9
|
26.6
|
1.0
|
HD1
|
A:PHE99
|
5.0
|
21.1
|
1.0
|
|
Reference:
M.K.Joshi,
S.Moran,
K.M.Beckingham,
K.R.Mackenzie.
Structure of Androcam Supports Specialized Interactions with Myosin VI. Proc.Natl.Acad.Sci.Usa V. 109 13290 2012.
ISSN: ISSN 0027-8424
PubMed: 22851764
DOI: 10.1073/PNAS.1209730109
Page generated: Fri Jul 12 14:08:54 2024
|