Calcium in PDB 2lmv: Androcam at High Calcium with Three Explicit CA2+

The binding sites of Calcium atom in the Androcam at High Calcium with Three Explicit CA2+ (pdb code 2lmv). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the Androcam at High Calcium with Three Explicit CA2+, PDB code: 2lmv:
Jump to Calcium binding site number: 1; 2; 3;

Calcium binding site 1 out of 3 in the Androcam at High Calcium with Three Explicit CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Androcam at High Calcium with Three Explicit CA2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca149 b:20.8 occ:1.00 HB2 A:ASP95 2.2 21.9 1.0 OD1 A:ASP93 2.3 19.0 1.0 O A:PHE99 2.3 19.6 1.0 OD1 A:ASP97 2.4 21.3 1.0 OE2 A:GLU104 2.5 20.8 1.0 OD2 A:ASP95 2.5 23.3 1.0 OE1 A:GLU104 2.5 21.4 1.0 H A:ASP95 2.8 20.9 1.0 CD A:GLU104 2.8 21.3 1.0 CB A:ASP95 3.1 22.5 1.0 CG A:ASP95 3.2 22.9 1.0 CG A:ASP93 3.4 18.6 1.0 HA A:ILE100 3.5 19.1 1.0 CG A:ASP97 3.5 21.7 1.0 N A:ASP95 3.5 21.4 1.0 C A:PHE99 3.6 19.0 1.0 H A:PHE99 3.6 19.5 1.0 CA A:ASP95 3.8 22.0 1.0 OD2 A:ASP93 3.8 18.9 1.0 HB3 A:ASP95 3.9 23.2 1.0 OD2 A:ASP97 4.0 21.7 1.0 O A:ASP95 4.2 20.4 1.0 C A:ASP95 4.2 21.4 1.0 H A:GLY98 4.2 20.0 1.0 HA A:ASP93 4.3 18.4 1.0 H A:ASP97 4.3 21.9 1.0 CG A:GLU104 4.3 21.7 1.0 N A:PHE99 4.4 19.0 1.0 H A:ARG94 4.4 19.9 1.0 OD1 A:ASP95 4.4 22.9 1.0 CA A:ILE100 4.4 18.7 1.0 N A:ILE100 4.4 18.5 1.0 H A:SER101 4.5 20.4 1.0 CA A:PHE99 4.5 18.9 1.0 N A:ARG94 4.5 19.9 1.0 HB2 A:PHE99 4.6 20.6 1.0 HB2 A:ARG94 4.6 21.9 1.0 CB A:ASP93 4.6 17.8 1.0 C A:ASP93 4.7 19.1 1.0 HG12 A:ILE100 4.7 17.5 1.0 HG2 A:GLU104 4.7 22.2 1.0 HA A:ASP95 4.7 22.6 1.0 C A:ARG94 4.8 21.6 1.0 HG3 A:GLU104 4.8 22.3 1.0 CB A:ASP97 4.8 22.3 1.0 CA A:ASP93 4.8 18.1 1.0 HB3 A:ASP97 4.8 23.0 1.0 HG A:SER101 4.8 22.6 1.0 N A:ASP97 5.0 21.8 1.0

Calcium binding site 2 out of 3 in the Androcam at High Calcium with Three Explicit CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Androcam at High Calcium with Three Explicit CA2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca150 b:19.2 occ:1.00 OD1 A:ASP129 2.3 20.4 1.0 O A:MET135 2.3 19.0 1.0 OD1 A:ASP133 2.4 21.3 1.0 OE1 A:GLU140 2.5 17.5 1.0 OD1 A:ASP131 2.5 20.0 1.0 OE2 A:GLU140 2.5 17.4 1.0 OD2 A:ASP131 2.7 20.1 1.0 CD A:GLU140 2.8 16.9 1.0 CG A:ASP131 2.9 20.3 1.0 CG A:ASP133 3.3 21.9 1.0 CG A:ASP129 3.4 19.9 1.0 HD22 A:ASN137 3.4 16.9 1.0 H A:MET135 3.5 21.1 1.0 C A:MET135 3.5 19.2 1.0 HD21 A:ASN137 3.6 17.0 1.0 HB2 A:ASP129 3.6 18.6 1.0 HA A:ILE136 3.6 17.2 1.0 HA A:ASP129 3.6 17.7 1.0 OD2 A:ASP133 3.7 21.6 1.0 HD13 A:ILE136 3.8 17.0 1.0 ND2 A:ASN137 3.8 16.8 1.0 CB A:ASP129 3.9 19.0 1.0 H A:ASP133 4.0 22.2 1.0 H A:ASP131 4.1 19.6 1.0 N A:MET135 4.2 21.1 1.0 H A:GLY132 4.3 21.1 1.0 CA A:ASP129 4.3 18.2 1.0 HB2 A:MET135 4.3 20.9 1.0 CG A:GLU140 4.3 15.7 1.0 OD2 A:ASP129 4.4 20.2 1.0 CB A:ASP131 4.4 21.2 1.0 CA A:MET135 4.4 20.4 1.0 N A:ILE136 4.4 18.4 1.0 H A:GLY134 4.4 22.3 1.0 CA A:ILE136 4.5 17.2 1.0 H A:PHE130 4.5 18.0 1.0 CB A:ASP133 4.5 23.1 1.0 N A:ASP133 4.5 22.9 1.0 H A:ASN137 4.6 16.0 1.0 HB3 A:ASP133 4.6 23.2 1.0 N A:GLY132 4.7 21.9 1.0 HG3 A:GLU140 4.8 15.5 1.0 N A:ASP131 4.8 20.4 1.0 HG2 A:GLU140 4.8 15.7 1.0 CD1 A:ILE136 4.8 16.8 1.0 HB2 A:ASP131 4.9 21.8 1.0 HB3 A:ASP131 4.9 21.0 1.0 C A:ASP129 4.9 18.9 1.0 HB3 A:ASP129 4.9 19.6 1.0 N A:GLY134 4.9 22.7 1.0 CB A:MET135 4.9 20.9 1.0 HB2 A:GLU140 5.0 15.1 1.0 N A:PHE130 5.0 18.6 1.0

Calcium binding site 3 out of 3 in the Androcam at High Calcium with Three Explicit CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Androcam at High Calcium with Three Explicit CA2+ within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca151 b:0.3 occ:1.00 O A:LYS26 2.3 0.2 1.0 OG1 A:THR24 2.4 0.3 1.0 OE1 A:GLN62 2.4 0.2 1.0 OD1 A:ASP20 2.4 0.3 1.0 HG1 A:THR24 2.6 1.0 1.0 HB2 A:GLU22 2.6 0.5 1.0 H A:LYS26 3.0 0.2 1.0 H A:THR24 3.2 0.4 1.0 C A:LYS26 3.3 0.2 1.0 HE22 A:GLN62 3.3 0.2 1.0 CD A:GLN62 3.4 0.2 1.0 HA A:ASP20 3.4 0.3 1.0 HB2 A:LYS26 3.5 0.2 1.0 CB A:GLU22 3.6 0.6 1.0 CG A:ASP20 3.7 0.3 1.0 HG3 A:GLU22 3.7 1.2 1.0 N A:LYS26 3.7 0.2 1.0 H A:GLU22 3.7 0.6 1.0 NE2 A:GLN62 3.8 0.2 1.0 CB A:THR24 3.8 0.3 1.0 HG2 A:GLU22 3.9 1.2 1.0 CA A:LYS26 3.9 0.2 1.0 CG A:GLU22 4.0 0.7 1.0 HA A:ILE27 4.0 0.3 1.0 N A:THR24 4.0 0.3 1.0 CB A:LYS26 4.1 0.2 1.0 HB3 A:GLU22 4.2 0.7 1.0 CA A:ASP20 4.3 0.3 1.0 CA A:THR24 4.3 0.3 1.0 HG23 A:THR24 4.3 1.1 1.0 HB3 A:LYS26 4.3 0.2 1.0 N A:ILE27 4.3 0.2 1.0 H A:GLY23 4.4 0.5 1.0 CB A:ASP20 4.4 0.2 1.0 N A:GLU22 4.4 0.6 1.0 HB A:THR24 4.4 0.3 1.0 H A:GLY25 4.4 0.3 1.0 CA A:GLU22 4.4 0.6 1.0 C A:THR24 4.5 0.3 1.0 CG2 A:THR24 4.5 0.4 1.0 HB2 A:ASP20 4.5 0.2 1.0 N A:GLY25 4.5 0.3 1.0 HG22 A:THR24 4.6 1.1 1.0 OD2 A:ASP20 4.6 0.3 1.0 N A:GLY23 4.7 0.5 1.0 CA A:ILE27 4.7 0.3 1.0 HE21 A:GLN62 4.7 0.2 1.0 C A:GLU22 4.7 0.6 1.0 CG A:GLN62 4.7 0.3 1.0 C A:ASP20 4.8 0.4 1.0 HG3 A:GLN62 4.8 0.3 1.0 O A:PHE19 4.8 0.6 1.0 H A:LYS21 4.9 0.5 1.0 H A:ALA28 4.9 0.3 1.0 C A:GLY25 4.9 0.3 1.0 HA A:LYS26 4.9 0.2 1.0

M.K.Joshi, S.Moran, K.M.Beckingham, K.R.Mackenzie. Structure of Androcam Supports Specialized Interactions with Myosin VI. Proc.Natl.Acad.Sci.Usa V. 109 13290 2012.
ISSN: ISSN 0027-8424
PubMed: 22851764
DOI: 10.1073/PNAS.1209730109