Atomistry » Calcium » PDB 2kug-2m0j » 2lqc
Atomistry »
  Calcium »
    PDB 2kug-2m0j »
      2lqc »

Calcium in PDB 2lqc: uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit

Calcium Binding Sites:

The binding sites of Calcium atom in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit (pdb code 2lqc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit, PDB code: 2lqc:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2lqc

Go back to Calcium Binding Sites List in 2lqc
Calcium binding site 1 out of 2 in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca101

b:0.0
occ:1.00
OD2 A:ASP24 2.6 0.0 1.0
OE2 A:GLU31 2.7 0.0 1.0
O A:THR26 2.7 0.0 1.0
OD1 A:ASP24 2.7 0.0 1.0
CG A:ASP24 2.9 0.0 1.0
OG1 A:THR28 3.0 0.0 1.0
OD2 A:ASP22 3.1 0.0 1.0
OG1 A:THR26 3.1 0.0 1.0
C A:THR26 3.2 0.0 1.0
CD A:GLU31 3.4 0.0 1.0
OE1 A:GLU31 3.5 0.0 1.0
HG1 A:THR28 3.6 0.0 1.0
HB A:THR26 3.7 0.0 1.0
HG1 A:THR26 3.7 0.0 1.0
H A:THR26 3.7 0.0 1.0
CB A:THR26 3.8 0.0 1.0
CG A:ASP22 3.8 0.0 1.0
HA A:ILE27 3.8 0.0 1.0
OD1 A:ASP22 3.8 0.0 1.0
OD1 A:ASP20 3.9 0.0 1.0
N A:ILE27 3.9 0.0 1.0
CA A:THR26 4.0 0.0 1.0
C A:ILE27 4.1 0.0 1.0
N A:THR28 4.1 0.0 1.0
CB A:THR28 4.1 0.0 1.0
CA A:ILE27 4.2 0.0 1.0
HB A:THR28 4.2 0.0 1.0
H A:THR28 4.2 0.0 1.0
HG23 A:THR62 4.2 0.0 1.0
CB A:ASP24 4.2 0.0 1.0
N A:THR26 4.2 0.0 1.0
HB3 A:ASP24 4.3 0.0 1.0
HB A:THR62 4.3 0.0 1.0
H A:ASP24 4.4 0.0 1.0
O A:ILE27 4.5 0.0 1.0
HG22 A:THR62 4.6 0.0 1.0
H A:ILE27 4.6 0.0 1.0
CG A:GLU31 4.7 0.0 1.0
CA A:THR28 4.7 0.0 1.0
HG3 A:GLU31 4.7 0.0 1.0
CG2 A:THR62 4.8 0.0 1.0
HB2 A:ASP24 4.9 0.0 1.0
HA A:THR26 5.0 0.0 1.0
CG A:ASP20 5.0 0.0 1.0
HA A:ASP20 5.0 0.0 1.0

Calcium binding site 2 out of 2 in 2lqc

Go back to Calcium Binding Sites List in 2lqc
Calcium binding site 2 out of 2 in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca102

b:0.0
occ:1.00
H A:ASP58 2.4 0.0 1.0
OD2 A:ASP64 2.9 0.0 1.0
H A:ALA57 2.9 0.0 1.0
O A:THR62 3.0 0.0 1.0
HB2 A:ASP58 3.1 0.0 1.0
HB1 A:ALA57 3.2 0.0 1.0
N A:ASP58 3.4 0.0 1.0
OE2 A:GLU67 3.4 0.0 1.0
N A:ALA57 3.5 0.0 1.0
HA A:ASP56 3.5 0.0 1.0
CG A:ASP64 3.5 0.0 1.0
OD1 A:ASP64 3.7 0.0 1.0
H A:GLY59 3.8 0.0 1.0
H A:ASP64 3.8 0.0 1.0
CB A:ASP58 3.9 0.0 1.0
HB2 A:ASP56 4.0 0.0 1.0
OE1 A:GLU67 4.0 0.0 1.0
HA A:ILE63 4.0 0.0 1.0
H A:ASN60 4.0 0.0 1.0
CD A:GLU67 4.1 0.0 1.0
OD2 A:ASP58 4.1 0.0 1.0
CB A:ALA57 4.1 0.0 1.0
C A:THR62 4.1 0.0 1.0
CA A:ALA57 4.1 0.0 1.0
C A:ASP56 4.2 0.0 1.0
H A:THR62 4.2 0.0 1.0
CG A:ASP58 4.2 0.0 1.0
CA A:ASP58 4.2 0.0 1.0
CA A:ASP56 4.2 0.0 1.0
C A:ALA57 4.2 0.0 1.0
OG1 A:THR62 4.3 0.0 1.0
HB3 A:ASN60 4.3 0.0 1.0
N A:ASP64 4.5 0.0 1.0
N A:GLY59 4.6 0.0 1.0
CB A:ASP56 4.6 0.0 1.0
HB2 A:ALA57 4.6 0.0 1.0
HG1 A:THR62 4.7 0.0 1.0
CB A:ASP64 4.8 0.0 1.0
CA A:ILE63 4.8 0.0 1.0
HB3 A:ALA57 4.8 0.0 1.0
HB3 A:ASP58 4.9 0.0 1.0
HD13 A:ILE63 4.9 0.0 1.0
N A:ILE63 4.9 0.0 1.0
C A:ASP58 4.9 0.0 1.0
HB2 A:ASN60 4.9 0.0 1.0
HB2 A:ASP64 4.9 0.0 1.0
N A:THR62 4.9 0.0 1.0
HB3 A:ASP56 5.0 0.0 1.0
N A:ASN60 5.0 0.0 1.0
OD1 A:ASP58 5.0 0.0 1.0

Reference:

Z.Liu, H.J.Vogel. Structural Basis For the Regulation of L-Type Voltage-Gated Calcium Channels: Interactions Between the N-Terminal Cytoplasmic Domain and Ca(2+)-Calmodulin. Front Mol Neurosci V. 5 38 2012.
PubMed: 22518098
DOI: 10.3389/FNMOL.2012.00038
Page generated: Sat Dec 12 03:45:40 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy