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Calcium in PDB 2lqc: uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit

Calcium Binding Sites:

The binding sites of Calcium atom in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit (pdb code 2lqc). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit, PDB code: 2lqc:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2lqc

Go back to Calcium Binding Sites List in 2lqc
Calcium binding site 1 out of 2 in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca101

b:0.0
occ:1.00
OD2 A:ASP24 2.6 0.0 1.0
OE2 A:GLU31 2.7 0.0 1.0
O A:THR26 2.7 0.0 1.0
OD1 A:ASP24 2.7 0.0 1.0
CG A:ASP24 2.9 0.0 1.0
OG1 A:THR28 3.0 0.0 1.0
OD2 A:ASP22 3.1 0.0 1.0
OG1 A:THR26 3.1 0.0 1.0
C A:THR26 3.2 0.0 1.0
CD A:GLU31 3.4 0.0 1.0
OE1 A:GLU31 3.5 0.0 1.0
HG1 A:THR28 3.6 0.0 1.0
HB A:THR26 3.7 0.0 1.0
HG1 A:THR26 3.7 0.0 1.0
H A:THR26 3.7 0.0 1.0
CB A:THR26 3.8 0.0 1.0
CG A:ASP22 3.8 0.0 1.0
HA A:ILE27 3.8 0.0 1.0
OD1 A:ASP22 3.8 0.0 1.0
OD1 A:ASP20 3.9 0.0 1.0
N A:ILE27 3.9 0.0 1.0
CA A:THR26 4.0 0.0 1.0
C A:ILE27 4.1 0.0 1.0
N A:THR28 4.1 0.0 1.0
CB A:THR28 4.1 0.0 1.0
CA A:ILE27 4.2 0.0 1.0
HB A:THR28 4.2 0.0 1.0
H A:THR28 4.2 0.0 1.0
HG23 A:THR62 4.2 0.0 1.0
CB A:ASP24 4.2 0.0 1.0
N A:THR26 4.2 0.0 1.0
HB3 A:ASP24 4.3 0.0 1.0
HB A:THR62 4.3 0.0 1.0
H A:ASP24 4.4 0.0 1.0
O A:ILE27 4.5 0.0 1.0
HG22 A:THR62 4.6 0.0 1.0
H A:ILE27 4.6 0.0 1.0
CG A:GLU31 4.7 0.0 1.0
CA A:THR28 4.7 0.0 1.0
HG3 A:GLU31 4.7 0.0 1.0
CG2 A:THR62 4.8 0.0 1.0
HB2 A:ASP24 4.9 0.0 1.0
HA A:THR26 5.0 0.0 1.0
CG A:ASP20 5.0 0.0 1.0
HA A:ASP20 5.0 0.0 1.0

Calcium binding site 2 out of 2 in 2lqc

Go back to Calcium Binding Sites List in 2lqc
Calcium binding site 2 out of 2 in the uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Solution Structure of A CA2+-Calmodulin with A Binding Motif (Nscate) Peptide From the N-Terminal Cytoplasmic Domain of the L-Type Voltage-Cated Calcium Channel ALPHA1C Subunit within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca102

b:0.0
occ:1.00
H A:ASP58 2.4 0.0 1.0
OD2 A:ASP64 2.9 0.0 1.0
H A:ALA57 2.9 0.0 1.0
O A:THR62 3.0 0.0 1.0
HB2 A:ASP58 3.1 0.0 1.0
HB1 A:ALA57 3.2 0.0 1.0
N A:ASP58 3.4 0.0 1.0
OE2 A:GLU67 3.4 0.0 1.0
N A:ALA57 3.5 0.0 1.0
HA A:ASP56 3.5 0.0 1.0
CG A:ASP64 3.5 0.0 1.0
OD1 A:ASP64 3.7 0.0 1.0
H A:GLY59 3.8 0.0 1.0
H A:ASP64 3.8 0.0 1.0
CB A:ASP58 3.9 0.0 1.0
HB2 A:ASP56 4.0 0.0 1.0
OE1 A:GLU67 4.0 0.0 1.0
HA A:ILE63 4.0 0.0 1.0
H A:ASN60 4.0 0.0 1.0
CD A:GLU67 4.1 0.0 1.0
OD2 A:ASP58 4.1 0.0 1.0
CB A:ALA57 4.1 0.0 1.0
C A:THR62 4.1 0.0 1.0
CA A:ALA57 4.1 0.0 1.0
C A:ASP56 4.2 0.0 1.0
H A:THR62 4.2 0.0 1.0
CG A:ASP58 4.2 0.0 1.0
CA A:ASP58 4.2 0.0 1.0
CA A:ASP56 4.2 0.0 1.0
C A:ALA57 4.2 0.0 1.0
OG1 A:THR62 4.3 0.0 1.0
HB3 A:ASN60 4.3 0.0 1.0
N A:ASP64 4.5 0.0 1.0
N A:GLY59 4.6 0.0 1.0
CB A:ASP56 4.6 0.0 1.0
HB2 A:ALA57 4.6 0.0 1.0
HG1 A:THR62 4.7 0.0 1.0
CB A:ASP64 4.8 0.0 1.0
CA A:ILE63 4.8 0.0 1.0
HB3 A:ALA57 4.8 0.0 1.0
HB3 A:ASP58 4.9 0.0 1.0
HD13 A:ILE63 4.9 0.0 1.0
N A:ILE63 4.9 0.0 1.0
C A:ASP58 4.9 0.0 1.0
HB2 A:ASN60 4.9 0.0 1.0
HB2 A:ASP64 4.9 0.0 1.0
N A:THR62 4.9 0.0 1.0
HB3 A:ASP56 5.0 0.0 1.0
N A:ASN60 5.0 0.0 1.0
OD1 A:ASP58 5.0 0.0 1.0

Reference:

Z.Liu, H.J.Vogel. Structural Basis For the Regulation of L-Type Voltage-Gated Calcium Channels: Interactions Between the N-Terminal Cytoplasmic Domain and Ca(2+)-Calmodulin. Front Mol Neurosci V. 5 38 2012.
PubMed: 22518098
DOI: 10.3389/FNMOL.2012.00038
Page generated: Fri Jul 12 14:09:55 2024

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