Calcium in PDB 2lux: Calcium Saturated Form of Human C85M S100A1 Mutant
Calcium Binding Sites:
The binding sites of Calcium atom in the Calcium Saturated Form of Human C85M S100A1 Mutant
(pdb code 2lux). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the
Calcium Saturated Form of Human C85M S100A1 Mutant, PDB code: 2lux:
Jump to Calcium binding site number:
1;
2;
3;
4;
Calcium binding site 1 out
of 4 in 2lux
Go back to
Calcium Binding Sites List in 2lux
Calcium binding site 1 out
of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca201
b:0.0
occ:1.00
|
OE1
|
A:GLU32
|
2.4
|
0.0
|
1.0
|
O
|
A:GLU22
|
2.4
|
0.0
|
1.0
|
O
|
A:LYS27
|
2.5
|
0.0
|
1.0
|
O
|
A:SER19
|
2.5
|
0.0
|
1.0
|
O
|
A:ASP24
|
2.6
|
0.0
|
1.0
|
HA
|
A:LEU28
|
2.8
|
0.0
|
1.0
|
OG
|
A:SER19
|
3.1
|
0.0
|
1.0
|
HG
|
A:SER19
|
3.1
|
0.0
|
1.0
|
HA3
|
A:GLY23
|
3.2
|
0.0
|
1.0
|
HA
|
A:SER19
|
3.2
|
0.0
|
1.0
|
CD
|
A:GLU32
|
3.2
|
0.0
|
1.0
|
HD13
|
A:LEU28
|
3.3
|
0.0
|
1.0
|
OE2
|
A:GLU32
|
3.4
|
0.0
|
1.0
|
C
|
A:SER19
|
3.4
|
0.0
|
1.0
|
C
|
A:ASP24
|
3.6
|
0.0
|
1.0
|
C
|
A:GLU22
|
3.6
|
0.0
|
1.0
|
C
|
A:LYS27
|
3.6
|
0.0
|
1.0
|
C
|
A:GLY23
|
3.6
|
0.0
|
1.0
|
N
|
A:ASP24
|
3.7
|
0.0
|
1.0
|
CA
|
A:SER19
|
3.7
|
0.0
|
1.0
|
H
|
A:ASP24
|
3.7
|
0.0
|
1.0
|
H
|
A:SER29
|
3.8
|
0.0
|
1.0
|
CA
|
A:GLY23
|
3.8
|
0.0
|
1.0
|
CA
|
A:LEU28
|
3.8
|
0.0
|
1.0
|
CB
|
A:SER19
|
4.0
|
0.0
|
1.0
|
O
|
A:GLY23
|
4.1
|
0.0
|
1.0
|
N
|
A:LEU28
|
4.1
|
0.0
|
1.0
|
HA
|
A:LYS25
|
4.2
|
0.0
|
1.0
|
N
|
A:GLY23
|
4.2
|
0.0
|
1.0
|
CA
|
A:ASP24
|
4.2
|
0.0
|
1.0
|
CD1
|
A:LEU28
|
4.3
|
0.0
|
1.0
|
H
|
A:GLU22
|
4.5
|
0.0
|
1.0
|
HD12
|
A:LEU28
|
4.5
|
0.0
|
1.0
|
N
|
A:LYS25
|
4.5
|
0.0
|
1.0
|
N
|
A:SER29
|
4.6
|
0.0
|
1.0
|
HB2
|
A:LEU28
|
4.6
|
0.0
|
1.0
|
H
|
A:LYS27
|
4.6
|
0.0
|
1.0
|
N
|
A:GLY20
|
4.6
|
0.0
|
1.0
|
HB3
|
A:SER19
|
4.6
|
0.0
|
1.0
|
CG
|
A:GLU32
|
4.7
|
0.0
|
1.0
|
HB2
|
A:ASP24
|
4.7
|
0.0
|
1.0
|
HB2
|
A:SER19
|
4.7
|
0.0
|
1.0
|
CB
|
A:LEU28
|
4.7
|
0.0
|
1.0
|
C
|
A:LEU28
|
4.7
|
0.0
|
1.0
|
CA
|
A:LYS25
|
4.7
|
0.0
|
1.0
|
HA2
|
A:GLY20
|
4.8
|
0.0
|
1.0
|
HA2
|
A:GLY23
|
4.8
|
0.0
|
1.0
|
CA
|
A:GLU22
|
4.8
|
0.0
|
1.0
|
CA
|
A:LYS27
|
4.8
|
0.0
|
1.0
|
HB2
|
A:GLU32
|
4.8
|
0.0
|
1.0
|
HB3
|
A:GLU32
|
4.9
|
0.0
|
1.0
|
HB2
|
A:GLU22
|
4.9
|
0.0
|
1.0
|
N
|
A:LYS27
|
4.9
|
0.0
|
1.0
|
N
|
A:GLU22
|
5.0
|
0.0
|
1.0
|
C
|
A:LYS25
|
5.0
|
0.0
|
1.0
|
O
|
A:LYS25
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 4 in 2lux
Go back to
Calcium Binding Sites List in 2lux
Calcium binding site 2 out
of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca202
b:0.0
occ:1.00
|
OD1
|
A:ASP62
|
2.2
|
0.0
|
1.0
|
OD2
|
A:ASP66
|
2.3
|
0.0
|
1.0
|
OE2
|
A:GLU73
|
2.4
|
0.0
|
1.0
|
OD1
|
A:ASN64
|
2.5
|
0.0
|
1.0
|
O
|
A:GLU68
|
2.5
|
0.0
|
1.0
|
HB2
|
A:ASN64
|
2.8
|
0.0
|
1.0
|
CG
|
A:ASP66
|
2.9
|
0.0
|
1.0
|
OD1
|
A:ASP66
|
2.9
|
0.0
|
1.0
|
OE1
|
A:GLU73
|
3.0
|
0.0
|
1.0
|
CG
|
A:ASP62
|
3.0
|
0.0
|
1.0
|
CD
|
A:GLU73
|
3.0
|
0.0
|
1.0
|
HA
|
A:VAL69
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASN64
|
3.4
|
0.0
|
1.0
|
OD2
|
A:ASP62
|
3.4
|
0.0
|
1.0
|
CB
|
A:ASN64
|
3.6
|
0.0
|
1.0
|
C
|
A:GLU68
|
3.7
|
0.0
|
1.0
|
H
|
A:ASN64
|
3.8
|
0.0
|
1.0
|
HA
|
A:ASP62
|
3.9
|
0.0
|
1.0
|
CB
|
A:ASP62
|
4.1
|
0.0
|
1.0
|
H
|
A:GLU68
|
4.1
|
0.0
|
1.0
|
HB2
|
A:ASP62
|
4.1
|
0.0
|
1.0
|
H
|
A:ASP66
|
4.2
|
0.0
|
1.0
|
HB3
|
A:ASN64
|
4.2
|
0.0
|
1.0
|
CA
|
A:VAL69
|
4.3
|
0.0
|
1.0
|
CB
|
A:ASP66
|
4.3
|
0.0
|
1.0
|
H
|
A:ASP70
|
4.4
|
0.0
|
1.0
|
CG
|
A:GLU73
|
4.4
|
0.0
|
1.0
|
HB2
|
A:GLU68
|
4.4
|
0.0
|
1.0
|
N
|
A:VAL69
|
4.4
|
0.0
|
1.0
|
H
|
A:GLY67
|
4.4
|
0.0
|
1.0
|
H
|
A:GLY65
|
4.4
|
0.0
|
1.0
|
HB3
|
A:ASP66
|
4.5
|
0.0
|
1.0
|
CA
|
A:ASP62
|
4.5
|
0.0
|
1.0
|
HG11
|
A:VAL69
|
4.5
|
0.0
|
1.0
|
N
|
A:ASN64
|
4.6
|
0.0
|
1.0
|
HG3
|
A:GLU73
|
4.6
|
0.0
|
1.0
|
ND2
|
A:ASN64
|
4.6
|
0.0
|
1.0
|
N
|
A:GLU68
|
4.6
|
0.0
|
1.0
|
CA
|
A:GLU68
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASN64
|
4.7
|
0.0
|
1.0
|
H
|
A:GLU63
|
4.7
|
0.0
|
1.0
|
N
|
A:ASP70
|
4.9
|
0.0
|
1.0
|
N
|
A:ASP66
|
4.9
|
0.0
|
1.0
|
HD22
|
A:ASN64
|
4.9
|
0.0
|
1.0
|
HG2
|
A:GLU73
|
5.0
|
0.0
|
1.0
|
HB2
|
A:ASP66
|
5.0
|
0.0
|
1.0
|
C
|
A:VAL69
|
5.0
|
0.0
|
1.0
|
HB3
|
A:ASP62
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 3 out
of 4 in 2lux
Go back to
Calcium Binding Sites List in 2lux
Calcium binding site 3 out
of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca101
b:0.0
occ:1.00
|
OE1
|
B:GLU32
|
2.4
|
0.0
|
1.0
|
O
|
B:GLU22
|
2.4
|
0.0
|
1.0
|
O
|
B:LYS27
|
2.5
|
0.0
|
1.0
|
O
|
B:SER19
|
2.5
|
0.0
|
1.0
|
O
|
B:ASP24
|
2.6
|
0.0
|
1.0
|
HA
|
B:LEU28
|
2.8
|
0.0
|
1.0
|
OG
|
B:SER19
|
3.1
|
0.0
|
1.0
|
HG
|
B:SER19
|
3.1
|
0.0
|
1.0
|
HA3
|
B:GLY23
|
3.2
|
0.0
|
1.0
|
HA
|
B:SER19
|
3.2
|
0.0
|
1.0
|
CD
|
B:GLU32
|
3.2
|
0.0
|
1.0
|
HD13
|
B:LEU28
|
3.3
|
0.0
|
1.0
|
OE2
|
B:GLU32
|
3.4
|
0.0
|
1.0
|
C
|
B:SER19
|
3.4
|
0.0
|
1.0
|
C
|
B:ASP24
|
3.6
|
0.0
|
1.0
|
C
|
B:GLU22
|
3.6
|
0.0
|
1.0
|
C
|
B:LYS27
|
3.6
|
0.0
|
1.0
|
C
|
B:GLY23
|
3.6
|
0.0
|
1.0
|
N
|
B:ASP24
|
3.7
|
0.0
|
1.0
|
CA
|
B:SER19
|
3.7
|
0.0
|
1.0
|
H
|
B:ASP24
|
3.7
|
0.0
|
1.0
|
H
|
B:SER29
|
3.8
|
0.0
|
1.0
|
CA
|
B:GLY23
|
3.8
|
0.0
|
1.0
|
CA
|
B:LEU28
|
3.8
|
0.0
|
1.0
|
CB
|
B:SER19
|
4.0
|
0.0
|
1.0
|
O
|
B:GLY23
|
4.1
|
0.0
|
1.0
|
N
|
B:LEU28
|
4.1
|
0.0
|
1.0
|
HA
|
B:LYS25
|
4.2
|
0.0
|
1.0
|
N
|
B:GLY23
|
4.2
|
0.0
|
1.0
|
CA
|
B:ASP24
|
4.2
|
0.0
|
1.0
|
CD1
|
B:LEU28
|
4.3
|
0.0
|
1.0
|
H
|
B:GLU22
|
4.5
|
0.0
|
1.0
|
HD12
|
B:LEU28
|
4.5
|
0.0
|
1.0
|
N
|
B:LYS25
|
4.5
|
0.0
|
1.0
|
N
|
B:SER29
|
4.6
|
0.0
|
1.0
|
HB2
|
B:LEU28
|
4.6
|
0.0
|
1.0
|
H
|
B:LYS27
|
4.6
|
0.0
|
1.0
|
N
|
B:GLY20
|
4.6
|
0.0
|
1.0
|
HB3
|
B:SER19
|
4.6
|
0.0
|
1.0
|
CG
|
B:GLU32
|
4.7
|
0.0
|
1.0
|
HB2
|
B:ASP24
|
4.7
|
0.0
|
1.0
|
HB2
|
B:SER19
|
4.7
|
0.0
|
1.0
|
CB
|
B:LEU28
|
4.7
|
0.0
|
1.0
|
C
|
B:LEU28
|
4.7
|
0.0
|
1.0
|
CA
|
B:LYS25
|
4.7
|
0.0
|
1.0
|
HA2
|
B:GLY20
|
4.8
|
0.0
|
1.0
|
HA2
|
B:GLY23
|
4.8
|
0.0
|
1.0
|
CA
|
B:GLU22
|
4.8
|
0.0
|
1.0
|
CA
|
B:LYS27
|
4.8
|
0.0
|
1.0
|
HB2
|
B:GLU32
|
4.8
|
0.0
|
1.0
|
HB3
|
B:GLU32
|
4.9
|
0.0
|
1.0
|
HB2
|
B:GLU22
|
4.9
|
0.0
|
1.0
|
N
|
B:LYS27
|
4.9
|
0.0
|
1.0
|
N
|
B:GLU22
|
5.0
|
0.0
|
1.0
|
C
|
B:LYS25
|
5.0
|
0.0
|
1.0
|
O
|
B:LYS25
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 4 out
of 4 in 2lux
Go back to
Calcium Binding Sites List in 2lux
Calcium binding site 4 out
of 4 in the Calcium Saturated Form of Human C85M S100A1 Mutant
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Calcium Saturated Form of Human C85M S100A1 Mutant within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca102
b:0.0
occ:1.00
|
OD1
|
B:ASP62
|
2.2
|
0.0
|
1.0
|
OD2
|
B:ASP66
|
2.3
|
0.0
|
1.0
|
OE2
|
B:GLU73
|
2.4
|
0.0
|
1.0
|
OD1
|
B:ASN64
|
2.5
|
0.0
|
1.0
|
O
|
B:GLU68
|
2.5
|
0.0
|
1.0
|
HB2
|
B:ASN64
|
2.8
|
0.0
|
1.0
|
CG
|
B:ASP66
|
2.9
|
0.0
|
1.0
|
OD1
|
B:ASP66
|
2.9
|
0.0
|
1.0
|
OE1
|
B:GLU73
|
3.0
|
0.0
|
1.0
|
CG
|
B:ASP62
|
3.0
|
0.0
|
1.0
|
CD
|
B:GLU73
|
3.0
|
0.0
|
1.0
|
HA
|
B:VAL69
|
3.3
|
0.0
|
1.0
|
CG
|
B:ASN64
|
3.4
|
0.0
|
1.0
|
OD2
|
B:ASP62
|
3.4
|
0.0
|
1.0
|
CB
|
B:ASN64
|
3.6
|
0.0
|
1.0
|
C
|
B:GLU68
|
3.7
|
0.0
|
1.0
|
H
|
B:ASN64
|
3.8
|
0.0
|
1.0
|
HA
|
B:ASP62
|
3.9
|
0.0
|
1.0
|
CB
|
B:ASP62
|
4.1
|
0.0
|
1.0
|
H
|
B:GLU68
|
4.1
|
0.0
|
1.0
|
HB2
|
B:ASP62
|
4.1
|
0.0
|
1.0
|
H
|
B:ASP66
|
4.2
|
0.0
|
1.0
|
HB3
|
B:ASN64
|
4.2
|
0.0
|
1.0
|
CA
|
B:VAL69
|
4.3
|
0.0
|
1.0
|
CB
|
B:ASP66
|
4.3
|
0.0
|
1.0
|
H
|
B:ASP70
|
4.4
|
0.0
|
1.0
|
HB2
|
B:GLU68
|
4.4
|
0.0
|
1.0
|
CG
|
B:GLU73
|
4.4
|
0.0
|
1.0
|
N
|
B:VAL69
|
4.4
|
0.0
|
1.0
|
H
|
B:GLY67
|
4.4
|
0.0
|
1.0
|
H
|
B:GLY65
|
4.4
|
0.0
|
1.0
|
HB3
|
B:ASP66
|
4.5
|
0.0
|
1.0
|
CA
|
B:ASP62
|
4.5
|
0.0
|
1.0
|
HG11
|
B:VAL69
|
4.5
|
0.0
|
1.0
|
N
|
B:ASN64
|
4.6
|
0.0
|
1.0
|
HG3
|
B:GLU73
|
4.6
|
0.0
|
1.0
|
ND2
|
B:ASN64
|
4.6
|
0.0
|
1.0
|
N
|
B:GLU68
|
4.6
|
0.0
|
1.0
|
CA
|
B:GLU68
|
4.7
|
0.0
|
1.0
|
CA
|
B:ASN64
|
4.7
|
0.0
|
1.0
|
H
|
B:GLU63
|
4.7
|
0.0
|
1.0
|
N
|
B:ASP70
|
4.9
|
0.0
|
1.0
|
N
|
B:ASP66
|
4.9
|
0.0
|
1.0
|
HD22
|
B:ASN64
|
4.9
|
0.0
|
1.0
|
HG2
|
B:GLU73
|
5.0
|
0.0
|
1.0
|
HB2
|
B:ASP66
|
5.0
|
0.0
|
1.0
|
C
|
B:VAL69
|
5.0
|
0.0
|
1.0
|
HB3
|
B:ASP62
|
5.0
|
0.0
|
1.0
|
|
Reference:
K.Ruszczynska-Bartnik,
A.Ejchart,
M.Budzinska,
K.Zdanowski.
Solution Structure of Human Holo-S100A1 C85M Mutant To Be Published.
Page generated: Fri Jul 12 14:12:09 2024
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