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Calcium in PDB 2lv7: Solution Structure of CA2+-Bound CABP7 N-Terminal Doman

Calcium Binding Sites:

The binding sites of Calcium atom in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman (pdb code 2lv7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman, PDB code: 2lv7:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2lv7

Go back to Calcium Binding Sites List in 2lv7
Calcium binding site 1 out of 2 in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of CA2+-Bound CABP7 N-Terminal Doman within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:0.0
occ:1.00
HB2 A:ASP48 2.3 0.0 1.0
OD1 A:ASP46 2.4 0.0 1.0
HD22 A:ASN50 2.5 0.0 1.0
OE2 A:GLU57 2.6 0.0 1.0
O A:PHE52 2.6 0.0 1.0
HE22 A:GLN88 2.7 0.0 1.0
OD2 A:ASP48 2.8 0.0 1.0
OD1 A:ASN50 2.8 0.0 1.0
OE1 A:GLU57 2.8 0.0 1.0
CD A:GLU57 3.1 0.0 1.0
ND2 A:ASN50 3.2 0.0 1.0
HE21 A:GLN88 3.2 0.0 1.0
CB A:ASP48 3.2 0.0 1.0
H A:ASP48 3.3 0.0 1.0
NE2 A:GLN88 3.3 0.0 1.0
CG A:ASN50 3.3 0.0 1.0
CG A:ASP46 3.4 0.0 1.0
CG A:ASP48 3.4 0.0 1.0
HA A:ILE53 3.6 0.0 1.0
H A:SER54 3.7 0.0 1.0
C A:PHE52 3.8 0.0 1.0
H A:ASN50 3.8 0.0 1.0
OD2 A:ASP46 3.8 0.0 1.0
HB3 A:ASP48 3.9 0.0 1.0
N A:ASP48 4.0 0.0 1.0
HD21 A:ASN50 4.0 0.0 1.0
H A:GLY49 4.1 0.0 1.0
CA A:ASP48 4.1 0.0 1.0
H A:PHE52 4.2 0.0 1.0
HB2 A:PHE52 4.2 0.0 1.0
HA A:ASP46 4.2 0.0 1.0
CA A:ILE53 4.5 0.0 1.0
N A:SER54 4.5 0.0 1.0
OG A:SER54 4.5 0.0 1.0
N A:GLY49 4.5 0.0 1.0
N A:ILE53 4.5 0.0 1.0
CB A:ASP46 4.6 0.0 1.0
CG A:GLU57 4.6 0.0 1.0
OD1 A:ASP48 4.6 0.0 1.0
CD A:GLN88 4.6 0.0 1.0
C A:ASP48 4.6 0.0 1.0
N A:ASN50 4.7 0.0 1.0
HB2 A:SER54 4.7 0.0 1.0
H A:ARG47 4.7 0.0 1.0
CA A:PHE52 4.7 0.0 1.0
CB A:ASN50 4.8 0.0 1.0
CA A:ASP46 4.8 0.0 1.0
N A:PHE52 4.8 0.0 1.0
HB2 A:ASP46 4.8 0.0 1.0
N A:ARG47 4.9 0.0 1.0
C A:ILE53 4.9 0.0 1.0
C A:ASP46 4.9 0.0 1.0
HG3 A:GLU57 5.0 0.0 1.0

Calcium binding site 2 out of 2 in 2lv7

Go back to Calcium Binding Sites List in 2lv7
Calcium binding site 2 out of 2 in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of CA2+-Bound CABP7 N-Terminal Doman within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca202

b:0.0
occ:1.00
HA A:ASP82 2.3 0.0 1.0
OE2 A:GLU93 2.5 0.0 1.0
OD1 A:ASP82 2.5 0.0 1.0
OD1 A:ASP86 2.5 0.0 1.0
O A:GLN88 2.6 0.0 1.0
OD1 A:ASP84 2.6 0.0 1.0
HA A:VAL89 2.7 0.0 1.0
OE1 A:GLU93 2.8 0.0 1.0
CD A:GLU93 3.0 0.0 1.0
H A:ASP90 3.1 0.0 1.0
OD1 A:ASP90 3.1 0.0 1.0
CA A:ASP82 3.2 0.0 1.0
CG A:ASP82 3.3 0.0 1.0
HB2 A:ASP82 3.5 0.0 1.0
CB A:ASP82 3.5 0.0 1.0
CG A:ASP84 3.6 0.0 1.0
CG A:ASP86 3.7 0.0 1.0
C A:GLN88 3.7 0.0 1.0
CA A:VAL89 3.7 0.0 1.0
H A:MET83 3.8 0.0 1.0
N A:ASP90 3.8 0.0 1.0
H A:ASP84 3.8 0.0 1.0
OD2 A:ASP84 3.9 0.0 1.0
H A:ASP86 3.9 0.0 1.0
C A:ASP82 4.1 0.0 1.0
H A:GLY85 4.1 0.0 1.0
OD2 A:ASP86 4.2 0.0 1.0
N A:MET83 4.2 0.0 1.0
N A:VAL89 4.2 0.0 1.0
N A:ASP82 4.2 0.0 1.0
C A:VAL89 4.3 0.0 1.0
HG11 A:VAL89 4.3 0.0 1.0
CG A:ASP90 4.3 0.0 1.0
O A:LEU81 4.3 0.0 1.0
HB2 A:ASP90 4.3 0.0 1.0
HG21 A:VAL89 4.4 0.0 1.0
CG A:GLU93 4.5 0.0 1.0
OD2 A:ASP82 4.5 0.0 1.0
HB3 A:ASP82 4.6 0.0 1.0
C A:LEU81 4.6 0.0 1.0
N A:ASP84 4.7 0.0 1.0
H A:GLN88 4.7 0.0 1.0
HG2 A:MET83 4.7 0.0 1.0
CB A:ASP90 4.7 0.0 1.0
HB2 A:GLU93 4.7 0.0 1.0
CB A:VAL89 4.8 0.0 1.0
N A:ASP86 4.8 0.0 1.0
CB A:ASP86 4.9 0.0 1.0
HB3 A:ASP86 4.9 0.0 1.0
HG3 A:GLU93 4.9 0.0 1.0
CB A:ASP84 4.9 0.0 1.0
H A:ASP82 4.9 0.0 1.0
CA A:ASP90 4.9 0.0 1.0
N A:GLY85 4.9 0.0 1.0
CG1 A:VAL89 5.0 0.0 1.0
O A:ASP82 5.0 0.0 1.0

Reference:

H.V.Mccue, P.Patel, A.P.Herbert, L.Y.Lian, R.D.Burgoyne, L.P.Haynes. Solution uc(Nmr) Structure of the CA2+-Bound N-Terminal Domain of CABP7: A Regulator of Golgi Trafficking. J.Biol.Chem. V. 287 38231 2012.
ISSN: ISSN 0021-9258
PubMed: 22989873
DOI: 10.1074/JBC.M112.402289
Page generated: Tue Jul 8 07:01:10 2025

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