Atomistry » Calcium » PDB 2kug-2m0j » 2lv7
Atomistry »
  Calcium »
    PDB 2kug-2m0j »
      2lv7 »

Calcium in PDB 2lv7: Solution Structure of CA2+-Bound CABP7 N-Terminal Doman

Calcium Binding Sites:

The binding sites of Calcium atom in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman (pdb code 2lv7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman, PDB code: 2lv7:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2lv7

Go back to Calcium Binding Sites List in 2lv7
Calcium binding site 1 out of 2 in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of CA2+-Bound CABP7 N-Terminal Doman within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:0.0
occ:1.00
HB2 A:ASP48 2.3 0.0 1.0
OD1 A:ASP46 2.4 0.0 1.0
HD22 A:ASN50 2.5 0.0 1.0
OE2 A:GLU57 2.6 0.0 1.0
O A:PHE52 2.6 0.0 1.0
HE22 A:GLN88 2.7 0.0 1.0
OD2 A:ASP48 2.8 0.0 1.0
OD1 A:ASN50 2.8 0.0 1.0
OE1 A:GLU57 2.8 0.0 1.0
CD A:GLU57 3.1 0.0 1.0
ND2 A:ASN50 3.2 0.0 1.0
HE21 A:GLN88 3.2 0.0 1.0
CB A:ASP48 3.2 0.0 1.0
H A:ASP48 3.3 0.0 1.0
NE2 A:GLN88 3.3 0.0 1.0
CG A:ASN50 3.3 0.0 1.0
CG A:ASP46 3.4 0.0 1.0
CG A:ASP48 3.4 0.0 1.0
HA A:ILE53 3.6 0.0 1.0
H A:SER54 3.7 0.0 1.0
C A:PHE52 3.8 0.0 1.0
H A:ASN50 3.8 0.0 1.0
OD2 A:ASP46 3.8 0.0 1.0
HB3 A:ASP48 3.9 0.0 1.0
N A:ASP48 4.0 0.0 1.0
HD21 A:ASN50 4.0 0.0 1.0
H A:GLY49 4.1 0.0 1.0
CA A:ASP48 4.1 0.0 1.0
H A:PHE52 4.2 0.0 1.0
HB2 A:PHE52 4.2 0.0 1.0
HA A:ASP46 4.2 0.0 1.0
CA A:ILE53 4.5 0.0 1.0
N A:SER54 4.5 0.0 1.0
OG A:SER54 4.5 0.0 1.0
N A:GLY49 4.5 0.0 1.0
N A:ILE53 4.5 0.0 1.0
CB A:ASP46 4.6 0.0 1.0
CG A:GLU57 4.6 0.0 1.0
OD1 A:ASP48 4.6 0.0 1.0
CD A:GLN88 4.6 0.0 1.0
C A:ASP48 4.6 0.0 1.0
N A:ASN50 4.7 0.0 1.0
HB2 A:SER54 4.7 0.0 1.0
H A:ARG47 4.7 0.0 1.0
CA A:PHE52 4.7 0.0 1.0
CB A:ASN50 4.8 0.0 1.0
CA A:ASP46 4.8 0.0 1.0
N A:PHE52 4.8 0.0 1.0
HB2 A:ASP46 4.8 0.0 1.0
N A:ARG47 4.9 0.0 1.0
C A:ILE53 4.9 0.0 1.0
C A:ASP46 4.9 0.0 1.0
HG3 A:GLU57 5.0 0.0 1.0

Calcium binding site 2 out of 2 in 2lv7

Go back to Calcium Binding Sites List in 2lv7
Calcium binding site 2 out of 2 in the Solution Structure of CA2+-Bound CABP7 N-Terminal Doman


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of CA2+-Bound CABP7 N-Terminal Doman within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca202

b:0.0
occ:1.00
HA A:ASP82 2.3 0.0 1.0
OE2 A:GLU93 2.5 0.0 1.0
OD1 A:ASP82 2.5 0.0 1.0
OD1 A:ASP86 2.5 0.0 1.0
O A:GLN88 2.6 0.0 1.0
OD1 A:ASP84 2.6 0.0 1.0
HA A:VAL89 2.7 0.0 1.0
OE1 A:GLU93 2.8 0.0 1.0
CD A:GLU93 3.0 0.0 1.0
H A:ASP90 3.1 0.0 1.0
OD1 A:ASP90 3.1 0.0 1.0
CA A:ASP82 3.2 0.0 1.0
CG A:ASP82 3.3 0.0 1.0
HB2 A:ASP82 3.5 0.0 1.0
CB A:ASP82 3.5 0.0 1.0
CG A:ASP84 3.6 0.0 1.0
CG A:ASP86 3.7 0.0 1.0
C A:GLN88 3.7 0.0 1.0
CA A:VAL89 3.7 0.0 1.0
H A:MET83 3.8 0.0 1.0
N A:ASP90 3.8 0.0 1.0
H A:ASP84 3.8 0.0 1.0
OD2 A:ASP84 3.9 0.0 1.0
H A:ASP86 3.9 0.0 1.0
C A:ASP82 4.1 0.0 1.0
H A:GLY85 4.1 0.0 1.0
OD2 A:ASP86 4.2 0.0 1.0
N A:MET83 4.2 0.0 1.0
N A:VAL89 4.2 0.0 1.0
N A:ASP82 4.2 0.0 1.0
C A:VAL89 4.3 0.0 1.0
HG11 A:VAL89 4.3 0.0 1.0
CG A:ASP90 4.3 0.0 1.0
O A:LEU81 4.3 0.0 1.0
HB2 A:ASP90 4.3 0.0 1.0
HG21 A:VAL89 4.4 0.0 1.0
CG A:GLU93 4.5 0.0 1.0
OD2 A:ASP82 4.5 0.0 1.0
HB3 A:ASP82 4.6 0.0 1.0
C A:LEU81 4.6 0.0 1.0
N A:ASP84 4.7 0.0 1.0
H A:GLN88 4.7 0.0 1.0
HG2 A:MET83 4.7 0.0 1.0
CB A:ASP90 4.7 0.0 1.0
HB2 A:GLU93 4.7 0.0 1.0
CB A:VAL89 4.8 0.0 1.0
N A:ASP86 4.8 0.0 1.0
CB A:ASP86 4.9 0.0 1.0
HB3 A:ASP86 4.9 0.0 1.0
HG3 A:GLU93 4.9 0.0 1.0
CB A:ASP84 4.9 0.0 1.0
H A:ASP82 4.9 0.0 1.0
CA A:ASP90 4.9 0.0 1.0
N A:GLY85 4.9 0.0 1.0
CG1 A:VAL89 5.0 0.0 1.0
O A:ASP82 5.0 0.0 1.0

Reference:

H.V.Mccue, P.Patel, A.P.Herbert, L.Y.Lian, R.D.Burgoyne, L.P.Haynes. Solution uc(Nmr) Structure of the CA2+-Bound N-Terminal Domain of CABP7: A Regulator of Golgi Trafficking. J.Biol.Chem. V. 287 38231 2012.
ISSN: ISSN 0021-9258
PubMed: 22989873
DOI: 10.1074/JBC.M112.402289
Page generated: Sat Dec 12 03:45:53 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy