Calcium in PDB 2lvk: Solution Structure of Ca-Bound Phl P 7

The binding sites of Calcium atom in the Solution Structure of Ca-Bound Phl P 7 (pdb code 2lvk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure of Ca-Bound Phl P 7, PDB code: 2lvk:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Solution Structure of Ca-Bound Phl P 7


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure of Ca-Bound Phl P 7 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca101 b:0.0 occ:1.00 HB3 A:ASN14 1.8 0.0 1.0 OD1 A:ASP12 2.2 0.0 1.0 O A:LYS18 2.4 0.0 1.0 OD1 A:ASP16 2.5 0.0 1.0 H A:ASP16 2.6 0.0 1.0 OE1 A:GLU23 2.7 0.0 1.0 H A:LYS18 2.7 0.0 1.0 OD1 A:ASN14 2.7 0.0 1.0 CB A:ASN14 2.8 0.0 1.0 HB3 A:ASP16 2.8 0.0 1.0 OE2 A:GLU23 2.8 0.0 1.0 CG A:ASN14 3.1 0.0 1.0 CD A:GLU23 3.1 0.0 1.0 CG A:ASP16 3.2 0.0 1.0 CB A:ASP16 3.4 0.0 1.0 N A:ASP16 3.4 0.0 1.0 C A:LYS18 3.4 0.0 1.0 H A:GLY17 3.4 0.0 1.0 CG A:ASP12 3.5 0.0 1.0 HB2 A:ASN14 3.5 0.0 1.0 H A:ASN14 3.5 0.0 1.0 N A:LYS18 3.6 0.0 1.0 HB2 A:LYS18 3.7 0.0 1.0 CA A:ASN14 3.7 0.0 1.0 C A:ASN14 3.8 0.0 1.0 CA A:ASP16 3.8 0.0 1.0 H A:GLY15 3.9 0.0 1.0 N A:GLY15 3.9 0.0 1.0 CA A:LYS18 4.0 0.0 1.0 N A:GLY17 4.0 0.0 1.0 OD2 A:ASP12 4.0 0.0 1.0 N A:ASN14 4.0 0.0 1.0 HA A:ASP12 4.1 0.0 1.0 HA A:ILE19 4.2 0.0 1.0 C A:ASP16 4.2 0.0 1.0 ND2 A:ASN14 4.3 0.0 1.0 OD2 A:ASP16 4.3 0.0 1.0 O A:ASN14 4.3 0.0 1.0 CB A:LYS18 4.4 0.0 1.0 HB2 A:ASP16 4.4 0.0 1.0 C A:GLY15 4.5 0.0 1.0 N A:ILE19 4.5 0.0 1.0 CG A:GLU23 4.6 0.0 1.0 HD11 A:ILE19 4.6 0.0 1.0 CB A:ASP12 4.6 0.0 1.0 HA A:ASN14 4.7 0.0 1.0 CA A:GLY15 4.7 0.0 1.0 C A:GLY17 4.7 0.0 1.0 CA A:ASP12 4.7 0.0 1.0 HD2 A:PHE53 4.7 0.0 1.0 HG3 A:LYS18 4.8 0.0 1.0 HG2 A:GLU23 4.8 0.0 1.0 HD21 A:ASN14 4.8 0.0 1.0 C A:ASP12 4.8 0.0 1.0 H A:SER20 4.8 0.0 1.0 HD22 A:ASN14 4.8 0.0 1.0 HA A:ASP16 4.9 0.0 1.0 HB2 A:ASP12 4.9 0.0 1.0 CA A:ILE19 4.9 0.0 1.0 O A:ASP12 4.9 0.0 1.0 CA A:GLY17 4.9 0.0 1.0 HA2 A:GLY15 4.9 0.0 1.0 HA A:LYS18 5.0 0.0 1.0

Calcium binding site 2 out of 2 in the Solution Structure of Ca-Bound Phl P 7


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure of Ca-Bound Phl P 7 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca102 b:0.0 occ:1.00 OD1 A:ASP47 2.2 0.0 1.0 OD2 A:ASP49 2.2 0.0 1.0 OE2 A:GLU58 2.4 0.0 1.0 OD1 A:ASP51 2.6 0.0 1.0 O A:PHE53 2.7 0.0 1.0 OE1 A:GLU58 2.7 0.0 1.0 CD A:GLU58 2.9 0.0 1.0 CG A:ASP49 3.1 0.0 1.0 H A:ASP55 3.1 0.0 1.0 OD2 A:ASP55 3.1 0.0 1.0 OD1 A:ASP55 3.3 0.0 1.0 CG A:ASP55 3.4 0.0 1.0 OD1 A:ASP49 3.4 0.0 1.0 CG A:ASP47 3.5 0.0 1.0 H A:ASP49 3.5 0.0 1.0 HA A:ILE54 3.6 0.0 1.0 H A:ASP51 3.7 0.0 1.0 CG A:ASP51 3.8 0.0 1.0 C A:PHE53 3.9 0.0 1.0 H A:GLY50 3.9 0.0 1.0 HA A:ASP47 3.9 0.0 1.0 N A:ASP55 4.0 0.0 1.0 OD2 A:ASP47 4.0 0.0 1.0 HB3 A:ASP51 4.2 0.0 1.0 H A:THR48 4.2 0.0 1.0 H A:PHE53 4.2 0.0 1.0 CB A:ASP49 4.3 0.0 1.0 N A:ASP49 4.4 0.0 1.0 N A:GLY50 4.4 0.0 1.0 CG A:GLU58 4.4 0.0 1.0 N A:ASP51 4.4 0.0 1.0 HD13 A:ILE54 4.4 0.0 1.0 CA A:ILE54 4.4 0.0 1.0 CB A:ASP55 4.5 0.0 1.0 HB2 A:ASP49 4.5 0.0 1.0 HB2 A:ASP55 4.5 0.0 1.0 CB A:ASP51 4.5 0.0 1.0 CB A:ASP47 4.5 0.0 1.0 N A:ILE54 4.6 0.0 1.0 HB2 A:PHE53 4.6 0.0 1.0 CA A:ASP47 4.7 0.0 1.0 HG3 A:GLU58 4.7 0.0 1.0 N A:THR48 4.7 0.0 1.0 C A:ILE54 4.7 0.0 1.0 CA A:ASP49 4.7 0.0 1.0 OD2 A:ASP51 4.8 0.0 1.0 HG2 A:GLU58 4.8 0.0 1.0 C A:ASP49 4.8 0.0 1.0 CA A:ASP55 4.9 0.0 1.0 HB3 A:ASP47 4.9 0.0 1.0 CA A:PHE53 4.9 0.0 1.0 HA2 A:GLY50 4.9 0.0 1.0 N A:PHE53 4.9 0.0 1.0

M.T.Henzl, A.G.Sirianni, W.G.Wycoff, A.Tan, J.J.Tanner. Solution Structures of Polcalcin Phl P 7 in Three Ligation States: Apo-, Hemi-Mg(2+) -Bound, and Fully Ca(2+) -Bound. Proteins V. 81 300 2013.
ISSN: ISSN 0887-3585
PubMed: 23011803
DOI: 10.1002/PROT.24186