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Calcium in PDB 2m28: uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain

Calcium Binding Sites:

The binding sites of Calcium atom in the uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain (pdb code 2m28). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain, PDB code: 2m28:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 2m28

Go back to Calcium Binding Sites List in 2m28
Calcium binding site 1 out of 2 in the uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca301

b:0.0
occ:1.00
OD2 A:ASP217 2.0 0.0 1.0
OD1 A:ASP219 2.5 0.0 1.0
OE1 A:GLU226 2.5 0.0 1.0
OD1 A:ASP217 2.5 0.0 1.0
O A:ARG221 2.5 0.0 1.0
OE2 A:GLU226 2.5 0.0 1.0
CG A:ASP217 2.5 0.0 1.0
OD1 A:ASP215 2.5 0.0 1.0
CD A:GLU226 2.7 0.0 1.0
CG A:ASP219 3.3 0.0 1.0
HB2 A:ARG221 3.5 0.0 1.0
CG A:ASP215 3.6 0.0 1.0
H A:ARG221 3.6 0.0 1.0
C A:ARG221 3.6 0.0 1.0
OD2 A:ASP219 3.9 0.0 1.0
H A:LYS216 4.0 0.0 1.0
CB A:ASP217 4.0 0.0 1.0
HA A:ASP215 4.0 0.0 1.0
HA A:ILE222 4.1 0.0 1.0
H A:ASP219 4.1 0.0 1.0
OD2 A:ASP215 4.1 0.0 1.0
CG A:GLU226 4.1 0.0 1.0
HB3 A:ASP219 4.1 0.0 1.0
N A:ARG221 4.2 0.0 1.0
CA A:ARG221 4.3 0.0 1.0
CB A:ARG221 4.3 0.0 1.0
HB3 A:ASP217 4.4 0.0 1.0
CB A:ASP219 4.4 0.0 1.0
HG2 A:GLU226 4.4 0.0 1.0
H A:ASP217 4.4 0.0 1.0
H A:THR223 4.5 0.0 1.0
HB2 A:ASP217 4.5 0.0 1.0
HG3 A:GLU226 4.5 0.0 1.0
H A:GLY220 4.6 0.0 1.0
N A:ASP217 4.6 0.0 1.0
N A:LYS216 4.6 0.0 1.0
N A:ILE222 4.7 0.0 1.0
HB3 A:ARG221 4.7 0.0 1.0
CB A:ASP215 4.8 0.0 1.0
CA A:ASP215 4.8 0.0 1.0
CA A:ASP217 4.9 0.0 1.0
CA A:ILE222 4.9 0.0 1.0
N A:ASP219 4.9 0.0 1.0

Calcium binding site 2 out of 2 in 2m28

Go back to Calcium Binding Sites List in 2m28
Calcium binding site 2 out of 2 in the uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca302

b:0.0
occ:1.00
OD2 A:ASP256 1.8 0.0 1.0
OD1 A:ASP252 2.2 0.0 1.0
CG A:ASP256 2.3 0.0 1.0
OE1 A:GLU263 2.4 0.0 1.0
OD1 A:ASP256 2.4 0.0 1.0
OD1 A:ASN254 2.4 0.0 1.0
OD2 A:ASP252 2.5 0.0 1.0
O A:THR258 2.5 0.0 1.0
OE2 A:GLU263 2.5 0.0 1.0
CG A:ASP252 2.5 0.0 1.0
CD A:GLU263 2.7 0.0 1.0
HG1 A:THR258 2.9 0.0 1.0
H A:THR258 2.9 0.0 1.0
H A:ASP256 3.2 0.0 1.0
CG A:ASN254 3.6 0.0 1.0
C A:THR258 3.6 0.0 1.0
H A:GLY257 3.6 0.0 1.0
CB A:ASP256 3.6 0.0 1.0
N A:THR258 3.8 0.0 1.0
HD22 A:ASN254 3.8 0.0 1.0
HA A:ASP252 3.8 0.0 1.0
HB3 A:ASP256 3.8 0.0 1.0
OG1 A:THR258 3.8 0.0 1.0
H A:LEU253 3.9 0.0 1.0
H A:ASN254 4.0 0.0 1.0
N A:ASP256 4.0 0.0 1.0
CB A:ASP252 4.0 0.0 1.0
ND2 A:ASN254 4.1 0.0 1.0
CA A:THR258 4.2 0.0 1.0
N A:GLY257 4.2 0.0 1.0
HA A:ILE259 4.2 0.0 1.0
CG A:GLU263 4.2 0.0 1.0
CA A:ASP256 4.3 0.0 1.0
HB2 A:ASP256 4.4 0.0 1.0
OD2 A:ASP260 4.4 0.0 1.0
CA A:ASP252 4.4 0.0 1.0
H A:GLY255 4.5 0.0 1.0
CB A:THR258 4.5 0.0 1.0
HB3 A:ASP252 4.5 0.0 1.0
HD11 A:ILE259 4.5 0.0 1.0
HB2 A:GLU263 4.5 0.0 1.0
HB2 A:ASP252 4.6 0.0 1.0
C A:ASP256 4.6 0.0 1.0
HB A:THR258 4.7 0.0 1.0
N A:ILE259 4.7 0.0 1.0
N A:LEU253 4.7 0.0 1.0
HG3 A:GLU263 4.7 0.0 1.0
CB A:ASN254 4.7 0.0 1.0
HG2 A:GLU263 4.8 0.0 1.0
H A:ASP260 4.8 0.0 1.0
N A:ASN254 4.8 0.0 1.0
HB2 A:ASN254 4.8 0.0 1.0
N A:GLY255 4.8 0.0 1.0
CB A:GLU263 4.9 0.0 1.0
C A:GLY257 4.9 0.0 1.0
CA A:ILE259 4.9 0.0 1.0
HB3 A:GLU263 5.0 0.0 1.0

Reference:

J.Ames, J.B.Ames. N/A N/A.
Page generated: Tue Jul 8 07:02:30 2025

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