Calcium in PDB 2m28: uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain
Calcium Binding Sites:
The binding sites of Calcium atom in the uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain
(pdb code 2m28). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain, PDB code: 2m28:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 2m28
Go back to
Calcium Binding Sites List in 2m28
Calcium binding site 1 out
of 2 in the uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca301
b:0.0
occ:1.00
|
OD2
|
A:ASP217
|
2.0
|
0.0
|
1.0
|
OD1
|
A:ASP219
|
2.5
|
0.0
|
1.0
|
OE1
|
A:GLU226
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP217
|
2.5
|
0.0
|
1.0
|
O
|
A:ARG221
|
2.5
|
0.0
|
1.0
|
OE2
|
A:GLU226
|
2.5
|
0.0
|
1.0
|
CG
|
A:ASP217
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP215
|
2.5
|
0.0
|
1.0
|
CD
|
A:GLU226
|
2.7
|
0.0
|
1.0
|
CG
|
A:ASP219
|
3.3
|
0.0
|
1.0
|
HB2
|
A:ARG221
|
3.5
|
0.0
|
1.0
|
CG
|
A:ASP215
|
3.6
|
0.0
|
1.0
|
H
|
A:ARG221
|
3.6
|
0.0
|
1.0
|
C
|
A:ARG221
|
3.6
|
0.0
|
1.0
|
OD2
|
A:ASP219
|
3.9
|
0.0
|
1.0
|
H
|
A:LYS216
|
4.0
|
0.0
|
1.0
|
CB
|
A:ASP217
|
4.0
|
0.0
|
1.0
|
HA
|
A:ASP215
|
4.0
|
0.0
|
1.0
|
HA
|
A:ILE222
|
4.1
|
0.0
|
1.0
|
H
|
A:ASP219
|
4.1
|
0.0
|
1.0
|
OD2
|
A:ASP215
|
4.1
|
0.0
|
1.0
|
CG
|
A:GLU226
|
4.1
|
0.0
|
1.0
|
HB3
|
A:ASP219
|
4.1
|
0.0
|
1.0
|
N
|
A:ARG221
|
4.2
|
0.0
|
1.0
|
CA
|
A:ARG221
|
4.3
|
0.0
|
1.0
|
CB
|
A:ARG221
|
4.3
|
0.0
|
1.0
|
HB3
|
A:ASP217
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASP219
|
4.4
|
0.0
|
1.0
|
HG2
|
A:GLU226
|
4.4
|
0.0
|
1.0
|
H
|
A:ASP217
|
4.4
|
0.0
|
1.0
|
H
|
A:THR223
|
4.5
|
0.0
|
1.0
|
HB2
|
A:ASP217
|
4.5
|
0.0
|
1.0
|
HG3
|
A:GLU226
|
4.5
|
0.0
|
1.0
|
H
|
A:GLY220
|
4.6
|
0.0
|
1.0
|
N
|
A:ASP217
|
4.6
|
0.0
|
1.0
|
N
|
A:LYS216
|
4.6
|
0.0
|
1.0
|
N
|
A:ILE222
|
4.7
|
0.0
|
1.0
|
HB3
|
A:ARG221
|
4.7
|
0.0
|
1.0
|
CB
|
A:ASP215
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASP215
|
4.8
|
0.0
|
1.0
|
CA
|
A:ASP217
|
4.9
|
0.0
|
1.0
|
CA
|
A:ILE222
|
4.9
|
0.0
|
1.0
|
N
|
A:ASP219
|
4.9
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 2m28
Go back to
Calcium Binding Sites List in 2m28
Calcium binding site 2 out
of 2 in the uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of uc(Nmr) Structure of CA2+ Bound CABP4 C-Domain within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca302
b:0.0
occ:1.00
|
OD2
|
A:ASP256
|
1.8
|
0.0
|
1.0
|
OD1
|
A:ASP252
|
2.2
|
0.0
|
1.0
|
CG
|
A:ASP256
|
2.3
|
0.0
|
1.0
|
OE1
|
A:GLU263
|
2.4
|
0.0
|
1.0
|
OD1
|
A:ASP256
|
2.4
|
0.0
|
1.0
|
OD1
|
A:ASN254
|
2.4
|
0.0
|
1.0
|
OD2
|
A:ASP252
|
2.5
|
0.0
|
1.0
|
O
|
A:THR258
|
2.5
|
0.0
|
1.0
|
OE2
|
A:GLU263
|
2.5
|
0.0
|
1.0
|
CG
|
A:ASP252
|
2.5
|
0.0
|
1.0
|
CD
|
A:GLU263
|
2.7
|
0.0
|
1.0
|
HG1
|
A:THR258
|
2.9
|
0.0
|
1.0
|
H
|
A:THR258
|
2.9
|
0.0
|
1.0
|
H
|
A:ASP256
|
3.2
|
0.0
|
1.0
|
CG
|
A:ASN254
|
3.6
|
0.0
|
1.0
|
C
|
A:THR258
|
3.6
|
0.0
|
1.0
|
H
|
A:GLY257
|
3.6
|
0.0
|
1.0
|
CB
|
A:ASP256
|
3.6
|
0.0
|
1.0
|
N
|
A:THR258
|
3.8
|
0.0
|
1.0
|
HD22
|
A:ASN254
|
3.8
|
0.0
|
1.0
|
HA
|
A:ASP252
|
3.8
|
0.0
|
1.0
|
HB3
|
A:ASP256
|
3.8
|
0.0
|
1.0
|
OG1
|
A:THR258
|
3.8
|
0.0
|
1.0
|
H
|
A:LEU253
|
3.9
|
0.0
|
1.0
|
H
|
A:ASN254
|
4.0
|
0.0
|
1.0
|
N
|
A:ASP256
|
4.0
|
0.0
|
1.0
|
CB
|
A:ASP252
|
4.0
|
0.0
|
1.0
|
ND2
|
A:ASN254
|
4.1
|
0.0
|
1.0
|
CA
|
A:THR258
|
4.2
|
0.0
|
1.0
|
N
|
A:GLY257
|
4.2
|
0.0
|
1.0
|
HA
|
A:ILE259
|
4.2
|
0.0
|
1.0
|
CG
|
A:GLU263
|
4.2
|
0.0
|
1.0
|
CA
|
A:ASP256
|
4.3
|
0.0
|
1.0
|
HB2
|
A:ASP256
|
4.4
|
0.0
|
1.0
|
OD2
|
A:ASP260
|
4.4
|
0.0
|
1.0
|
CA
|
A:ASP252
|
4.4
|
0.0
|
1.0
|
H
|
A:GLY255
|
4.5
|
0.0
|
1.0
|
CB
|
A:THR258
|
4.5
|
0.0
|
1.0
|
HB3
|
A:ASP252
|
4.5
|
0.0
|
1.0
|
HD11
|
A:ILE259
|
4.5
|
0.0
|
1.0
|
HB2
|
A:GLU263
|
4.5
|
0.0
|
1.0
|
HB2
|
A:ASP252
|
4.6
|
0.0
|
1.0
|
C
|
A:ASP256
|
4.6
|
0.0
|
1.0
|
HB
|
A:THR258
|
4.7
|
0.0
|
1.0
|
N
|
A:ILE259
|
4.7
|
0.0
|
1.0
|
N
|
A:LEU253
|
4.7
|
0.0
|
1.0
|
HG3
|
A:GLU263
|
4.7
|
0.0
|
1.0
|
CB
|
A:ASN254
|
4.7
|
0.0
|
1.0
|
HG2
|
A:GLU263
|
4.8
|
0.0
|
1.0
|
H
|
A:ASP260
|
4.8
|
0.0
|
1.0
|
N
|
A:ASN254
|
4.8
|
0.0
|
1.0
|
HB2
|
A:ASN254
|
4.8
|
0.0
|
1.0
|
N
|
A:GLY255
|
4.8
|
0.0
|
1.0
|
CB
|
A:GLU263
|
4.9
|
0.0
|
1.0
|
C
|
A:GLY257
|
4.9
|
0.0
|
1.0
|
CA
|
A:ILE259
|
4.9
|
0.0
|
1.0
|
HB3
|
A:GLU263
|
5.0
|
0.0
|
1.0
|
|
Reference:
J.Ames,
J.B.Ames.
N/A N/A.
Page generated: Fri Jul 12 14:14:35 2024
|