Calcium in PDB 2m7n: C-Terminal Structure of (Y81F)-EHCABP1
Calcium Binding Sites:
The binding sites of Calcium atom in the C-Terminal Structure of (Y81F)-EHCABP1
(pdb code 2m7n). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
C-Terminal Structure of (Y81F)-EHCABP1, PDB code: 2m7n:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 2m7n
Go back to
Calcium Binding Sites List in 2m7n
Calcium binding site 1 out
of 2 in the C-Terminal Structure of (Y81F)-EHCABP1
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of C-Terminal Structure of (Y81F)-EHCABP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca201
b:34.0
occ:1.00
|
OD1
|
A:ASP85
|
1.0
|
43.4
|
1.0
|
CG
|
A:ASP85
|
2.2
|
53.2
|
1.0
|
OE1
|
A:GLU96
|
2.7
|
75.4
|
1.0
|
OD2
|
A:ASP89
|
2.8
|
61.4
|
1.0
|
OE2
|
A:GLU96
|
2.8
|
22.1
|
1.0
|
HA
|
A:LEU92
|
2.8
|
51.3
|
1.0
|
OD2
|
A:ASP87
|
2.9
|
13.3
|
1.0
|
OD1
|
A:ASP87
|
2.9
|
23.3
|
1.0
|
OD1
|
A:ASP89
|
3.0
|
12.3
|
1.0
|
OD2
|
A:ASP85
|
3.0
|
25.5
|
1.0
|
O
|
A:LYS91
|
3.0
|
34.2
|
1.0
|
HA
|
A:ASP85
|
3.0
|
14.0
|
1.0
|
CD
|
A:GLU96
|
3.1
|
72.0
|
1.0
|
CG
|
A:ASP89
|
3.3
|
61.1
|
1.0
|
CG
|
A:ASP87
|
3.3
|
34.2
|
1.0
|
CB
|
A:ASP85
|
3.3
|
54.5
|
1.0
|
HB3
|
A:ASP85
|
3.6
|
72.2
|
1.0
|
CA
|
A:ASP85
|
3.7
|
32.1
|
1.0
|
CA
|
A:LEU92
|
3.9
|
71.5
|
1.0
|
C
|
A:LYS91
|
3.9
|
53.4
|
1.0
|
H
|
A:THR93
|
4.1
|
51.1
|
1.0
|
HB2
|
A:ASP85
|
4.2
|
53.3
|
1.0
|
N
|
A:LEU92
|
4.3
|
53.0
|
1.0
|
H
|
A:ASP87
|
4.4
|
24.1
|
1.0
|
H
|
A:ASP89
|
4.4
|
53.1
|
1.0
|
HB3
|
A:LEU92
|
4.4
|
14.0
|
1.0
|
HB2
|
A:LEU92
|
4.4
|
43.0
|
1.0
|
H
|
A:LYS91
|
4.5
|
41.5
|
1.0
|
CB
|
A:LEU92
|
4.6
|
34.3
|
1.0
|
CG
|
A:GLU96
|
4.6
|
33.1
|
1.0
|
HB2
|
A:GLU96
|
4.6
|
74.4
|
1.0
|
C
|
A:ASP85
|
4.6
|
15.3
|
1.0
|
HZ1
|
A:LYS91
|
4.7
|
74.5
|
1.0
|
O
|
A:MET84
|
4.7
|
71.5
|
1.0
|
CB
|
A:ASP89
|
4.8
|
50.3
|
1.0
|
N
|
A:ASP85
|
4.8
|
32.3
|
1.0
|
N
|
A:THR93
|
4.8
|
3.4
|
1.0
|
CB
|
A:ASP87
|
4.8
|
4.3
|
1.0
|
C
|
A:LEU92
|
4.9
|
55.1
|
1.0
|
|
Calcium binding site 2 out
of 2 in 2m7n
Go back to
Calcium Binding Sites List in 2m7n
Calcium binding site 2 out
of 2 in the C-Terminal Structure of (Y81F)-EHCABP1
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of C-Terminal Structure of (Y81F)-EHCABP1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca202
b:64.1
occ:1.00
|
OD1
|
A:ASN119
|
2.2
|
74.5
|
1.0
|
OD1
|
A:ASP121
|
2.3
|
55.2
|
1.0
|
OD2
|
A:ASP121
|
2.4
|
0.0
|
1.0
|
CG
|
A:ASP121
|
2.6
|
30.0
|
1.0
|
HD22
|
A:ASN119
|
2.8
|
55.2
|
1.0
|
OE1
|
A:GLU128
|
2.8
|
11.3
|
1.0
|
OD2
|
A:ASP117
|
2.8
|
4.3
|
1.0
|
OD1
|
A:ASP117
|
2.8
|
60.1
|
1.0
|
CG
|
A:ASP117
|
2.9
|
45.3
|
1.0
|
OE2
|
A:GLU128
|
2.9
|
54.4
|
1.0
|
O
|
A:TYR123
|
3.0
|
75.4
|
1.0
|
CG
|
A:ASN119
|
3.0
|
54.4
|
1.0
|
HA
|
A:ASP117
|
3.2
|
51.2
|
1.0
|
CD
|
A:GLU128
|
3.2
|
61.1
|
1.0
|
ND2
|
A:ASN119
|
3.3
|
21.1
|
1.0
|
H
|
A:ASP121
|
3.5
|
61.0
|
1.0
|
H
|
A:ASN119
|
3.8
|
2.1
|
1.0
|
HA
|
A:ILE124
|
3.8
|
54.2
|
1.0
|
H
|
A:TYR123
|
4.0
|
71.4
|
1.0
|
CA
|
A:ASP117
|
4.0
|
34.0
|
1.0
|
CB
|
A:ASP117
|
4.0
|
33.3
|
1.0
|
CB
|
A:ASP121
|
4.1
|
62.3
|
1.0
|
C
|
A:TYR123
|
4.1
|
42.2
|
1.0
|
H
|
A:GLY122
|
4.2
|
42.4
|
1.0
|
HD21
|
A:ASN119
|
4.2
|
72.5
|
1.0
|
N
|
A:ASP121
|
4.3
|
32.2
|
1.0
|
HG23
|
A:ILE124
|
4.4
|
3.1
|
1.0
|
CB
|
A:ASN119
|
4.4
|
54.5
|
1.0
|
HB3
|
A:ASP121
|
4.5
|
3.3
|
1.0
|
HB2
|
A:ASP117
|
4.6
|
11.4
|
1.0
|
H
|
A:GLY120
|
4.6
|
33.3
|
1.0
|
H
|
A:ALA118
|
4.6
|
61.4
|
1.0
|
HB
|
A:ILE124
|
4.6
|
75.4
|
1.0
|
N
|
A:TYR123
|
4.7
|
62.2
|
1.0
|
HB2
|
A:ASP121
|
4.7
|
13.4
|
1.0
|
N
|
A:ASN119
|
4.7
|
61.0
|
1.0
|
CA
|
A:ILE124
|
4.7
|
0.1
|
1.0
|
C
|
A:ASP117
|
4.7
|
0.4
|
1.0
|
CA
|
A:ASP121
|
4.7
|
32.4
|
1.0
|
CG
|
A:GLU128
|
4.8
|
12.4
|
1.0
|
HB2
|
A:ASN119
|
4.8
|
75.4
|
1.0
|
HB3
|
A:ASP117
|
4.8
|
71.3
|
1.0
|
N
|
A:GLY122
|
4.8
|
1.6
|
1.0
|
N
|
A:ILE124
|
4.8
|
43.0
|
1.0
|
N
|
A:GLY120
|
4.9
|
33.3
|
1.0
|
N
|
A:ALA118
|
4.9
|
51.1
|
1.0
|
HD1
|
A:TYR123
|
5.0
|
2.3
|
1.0
|
CA
|
A:ASN119
|
5.0
|
14.3
|
1.0
|
|
Reference:
A.K.Rout,
S.Patel,
Somlata,
M.Shukla,
D.Saraswathi,
A.Bhattacharya,
K.V.Chary.
Functional Manipulation of A Calcium-Binding Protein From Entamoeba Histolytica Guided By Paramagnetic uc(Nmr). J.Biol.Chem. V. 288 23473 2013.
ISSN: ISSN 0021-9258
PubMed: 23782698
DOI: 10.1074/JBC.M112.411058
Page generated: Fri Jul 12 14:15:22 2024
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