Calcium in PDB 2mbx: Structure, Dynamics and Stability of Allergen Cod Parvalbumin Gad M 1 By Solution and High-Pressure uc(Nmr).

The binding sites of Calcium atom in the Structure, Dynamics and Stability of Allergen Cod Parvalbumin Gad M 1 By Solution and High-Pressure uc(Nmr). (pdb code 2mbx). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure, Dynamics and Stability of Allergen Cod Parvalbumin Gad M 1 By Solution and High-Pressure uc(Nmr)., PDB code: 2mbx:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Structure, Dynamics and Stability of Allergen Cod Parvalbumin Gad M 1 By Solution and High-Pressure uc(Nmr).


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure, Dynamics and Stability of Allergen Cod Parvalbumin Gad M 1 By Solution and High-Pressure uc(Nmr). within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:0.0 occ:1.00 OD1 A:ASP52 1.8 0.0 1.0 OE1 A:GLU63 1.8 0.0 1.0 OE2 A:GLU63 1.9 0.0 1.0 OG A:SER56 2.0 0.0 1.0 O A:PHE58 2.0 0.0 1.0 CD A:GLU63 2.1 0.0 1.0 HG A:SER56 2.3 0.0 1.0 HB2 A:ASP54 2.8 0.0 1.0 H A:SER56 2.9 0.0 1.0 HA A:VAL59 3.0 0.0 1.0 HA A:ASP52 3.0 0.0 1.0 CG A:ASP52 3.0 0.0 1.0 C A:PHE58 3.2 0.0 1.0 CB A:SER56 3.3 0.0 1.0 H A:PHE58 3.4 0.0 1.0 H A:ASP54 3.5 0.0 1.0 N A:SER56 3.6 0.0 1.0 HB3 A:SER56 3.6 0.0 1.0 CG A:GLU63 3.6 0.0 1.0 H A:GLU60 3.8 0.0 1.0 CA A:ASP52 3.8 0.0 1.0 CB A:ASP54 3.8 0.0 1.0 H A:LYS55 3.8 0.0 1.0 OD2 A:ASP52 3.9 0.0 1.0 CA A:SER56 3.9 0.0 1.0 CA A:VAL59 3.9 0.0 1.0 CB A:ASP52 4.0 0.0 1.0 N A:VAL59 4.0 0.0 1.0 HB2 A:SER56 4.0 0.0 1.0 HG2 A:GLU63 4.0 0.0 1.0 HG3 A:GLU63 4.0 0.0 1.0 N A:PHE58 4.1 0.0 1.0 HB3 A:ASP54 4.1 0.0 1.0 N A:LYS55 4.2 0.0 1.0 C A:ASP52 4.2 0.0 1.0 CA A:PHE58 4.2 0.0 1.0 N A:ASP54 4.3 0.0 1.0 C A:SER56 4.4 0.0 1.0 HB2 A:ASP52 4.4 0.0 1.0 H A:ASP57 4.4 0.0 1.0 HB2 A:PHE58 4.4 0.0 1.0 HB A:VAL59 4.4 0.0 1.0 CA A:ASP54 4.5 0.0 1.0 HB3 A:GLU63 4.5 0.0 1.0 CB A:GLU63 4.5 0.0 1.0 C A:ASP54 4.6 0.0 1.0 N A:ASP57 4.6 0.0 1.0 H A:GLN53 4.6 0.0 1.0 C A:LYS55 4.6 0.0 1.0 N A:GLU60 4.6 0.0 1.0 O A:ASP52 4.6 0.0 1.0 HB2 A:GLU63 4.7 0.0 1.0 N A:GLN53 4.7 0.0 1.0 HA A:LYS55 4.7 0.0 1.0 CG A:ASP54 4.8 0.0 1.0 CA A:LYS55 4.8 0.0 1.0 CB A:VAL59 4.8 0.0 1.0 HB3 A:ASP52 4.8 0.0 1.0 OD1 A:ASP54 4.8 0.0 1.0 O A:ILE51 4.9 0.0 1.0 C A:VAL59 4.9 0.0 1.0 CB A:PHE58 4.9 0.0 1.0 HA A:SER56 4.9 0.0 1.0 H A:VAL59 4.9 0.0 1.0 O A:SER56 5.0 0.0 1.0 HG12 A:VAL59 5.0 0.0 1.0

Calcium binding site 2 out of 2 in the Structure, Dynamics and Stability of Allergen Cod Parvalbumin Gad M 1 By Solution and High-Pressure uc(Nmr).


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure, Dynamics and Stability of Allergen Cod Parvalbumin Gad M 1 By Solution and High-Pressure uc(Nmr). within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca202 b:0.0 occ:1.00 OD1 A:ASP93 1.8 0.0 1.0 OD1 A:ASP91 1.8 0.0 1.0 OD1 A:ASP95 1.8 0.0 1.0 OE1 A:GLU102 1.8 0.0 1.0 CD A:GLU102 2.7 0.0 1.0 HG2 A:LYS97 2.8 0.0 1.0 CG A:ASP93 2.8 0.0 1.0 CG A:ASP95 2.8 0.0 1.0 H A:ASP95 2.9 0.0 1.0 OE2 A:GLU102 3.0 0.0 1.0 CG A:ASP91 3.0 0.0 1.0 HA A:ASP91 3.0 0.0 1.0 OD2 A:ASP93 3.2 0.0 1.0 OD2 A:ASP95 3.3 0.0 1.0 H A:ASP93 3.4 0.0 1.0 H A:GLY99 3.5 0.0 1.0 O A:LYS97 3.6 0.0 1.0 H A:GLY94 3.7 0.0 1.0 N A:ASP95 3.8 0.0 1.0 CA A:ASP91 3.8 0.0 1.0 H A:LYS97 3.8 0.0 1.0 CB A:ASP91 3.8 0.0 1.0 CG A:LYS97 3.8 0.0 1.0 H A:SER92 3.9 0.0 1.0 OD2 A:ASP91 3.9 0.0 1.0 HB2 A:ASP91 4.0 0.0 1.0 CB A:ASP95 4.1 0.0 1.0 CG A:GLU102 4.1 0.0 1.0 N A:GLY94 4.1 0.0 1.0 CB A:ASP93 4.1 0.0 1.0 HD3 A:LYS97 4.2 0.0 1.0 N A:ASP93 4.2 0.0 1.0 HD2 A:LYS97 4.2 0.0 1.0 HG3 A:GLU102 4.3 0.0 1.0 HG3 A:LYS97 4.3 0.0 1.0 CD A:LYS97 4.3 0.0 1.0 C A:ASP91 4.3 0.0 1.0 N A:SER92 4.4 0.0 1.0 C A:LYS97 4.4 0.0 1.0 CA A:ASP95 4.4 0.0 1.0 N A:GLY99 4.4 0.0 1.0 CA A:ASP93 4.5 0.0 1.0 HB3 A:ASP95 4.5 0.0 1.0 C A:ASP93 4.5 0.0 1.0 HA3 A:GLY99 4.6 0.0 1.0 N A:LYS97 4.6 0.0 1.0 H A:GLY96 4.7 0.0 1.0 HA A:ILE98 4.7 0.0 1.0 HB2 A:ASP93 4.7 0.0 1.0 C A:ASP95 4.7 0.0 1.0 HG2 A:GLU102 4.8 0.0 1.0 CB A:LYS97 4.8 0.0 1.0 HB3 A:ASP91 4.8 0.0 1.0 HB3 A:ASP93 4.8 0.0 1.0 C A:GLY94 4.8 0.0 1.0 HB2 A:ASP95 4.9 0.0 1.0 CA A:LYS97 4.9 0.0 1.0 CA A:GLY94 4.9 0.0 1.0 N A:GLY96 4.9 0.0 1.0 HB3 A:LYS97 4.9 0.0 1.0 HB3 A:GLU102 4.9 0.0 1.0 HB2 A:GLU102 4.9 0.0 1.0 HA2 A:GLY94 5.0 0.0 1.0 CB A:GLU102 5.0 0.0 1.0

A.H.Moraes, D.Ackerbauer, M.Kostadinova, M.Bublin, F.Ferreira, F.C.Almeida, H.Breiteneder, A.P.Valente. Solution and High-Pressure uc(Nmr) Studies of the Structure, Dynamics and Stability of the Cross-Reactive Allergenic Cod Parvalbumin Gad M 1 To Be Published.