Calcium in PDB 2mle: uc(Nmr) Structure of the C-Domain of Troponin C Bound to the Anchoring Region of Troponin I
Calcium Binding Sites:
The binding sites of Calcium atom in the uc(Nmr) Structure of the C-Domain of Troponin C Bound to the Anchoring Region of Troponin I
(pdb code 2mle). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
uc(Nmr) Structure of the C-Domain of Troponin C Bound to the Anchoring Region of Troponin I, PDB code: 2mle:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 2mle
Go back to
Calcium Binding Sites List in 2mle
Calcium binding site 1 out
of 2 in the uc(Nmr) Structure of the C-Domain of Troponin C Bound to the Anchoring Region of Troponin I
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of uc(Nmr) Structure of the C-Domain of Troponin C Bound to the Anchoring Region of Troponin I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca201
b:0.0
occ:1.00
|
OD1
|
C:ASP141
|
1.8
|
0.0
|
1.0
|
O
|
C:ARG147
|
1.8
|
0.0
|
1.0
|
OD2
|
C:ASP145
|
1.9
|
0.0
|
1.0
|
OE1
|
C:GLU152
|
1.9
|
0.0
|
1.0
|
OE2
|
C:GLU152
|
2.0
|
0.0
|
1.0
|
OD1
|
C:ASP145
|
2.0
|
0.0
|
1.0
|
CG
|
C:ASP145
|
2.2
|
0.0
|
1.0
|
CD
|
C:GLU152
|
2.2
|
0.0
|
1.0
|
HA
|
C:ASP141
|
2.9
|
0.0
|
1.0
|
H
|
C:ARG147
|
3.0
|
0.0
|
1.0
|
CG
|
C:ASP141
|
3.0
|
0.0
|
1.0
|
C
|
C:ARG147
|
3.1
|
0.0
|
1.0
|
H
|
C:ASP145
|
3.2
|
0.0
|
1.0
|
HA
|
C:ILE148
|
3.3
|
0.0
|
1.0
|
H
|
C:ASP149
|
3.5
|
0.0
|
1.0
|
N
|
C:ARG147
|
3.7
|
0.0
|
1.0
|
CB
|
C:ASP145
|
3.7
|
0.0
|
1.0
|
HB2
|
C:ARG147
|
3.7
|
0.0
|
1.0
|
CA
|
C:ASP141
|
3.7
|
0.0
|
1.0
|
CG
|
C:GLU152
|
3.7
|
0.0
|
1.0
|
H
|
C:ASN143
|
3.8
|
0.0
|
1.0
|
CB
|
C:ASP141
|
3.9
|
0.0
|
1.0
|
OD2
|
C:ASP141
|
3.9
|
0.0
|
1.0
|
CA
|
C:ARG147
|
3.9
|
0.0
|
1.0
|
HB3
|
C:ASN143
|
4.0
|
0.0
|
1.0
|
N
|
C:ILE148
|
4.0
|
0.0
|
1.0
|
N
|
C:ASP145
|
4.0
|
0.0
|
1.0
|
CA
|
C:ILE148
|
4.1
|
0.0
|
1.0
|
HG3
|
C:GLU152
|
4.2
|
0.0
|
1.0
|
HB2
|
C:ASP141
|
4.2
|
0.0
|
1.0
|
HB3
|
C:ASP145
|
4.2
|
0.0
|
1.0
|
H
|
C:LYS142
|
4.2
|
0.0
|
1.0
|
HG2
|
C:GLU152
|
4.2
|
0.0
|
1.0
|
HD12
|
C:ILE148
|
4.2
|
0.0
|
1.0
|
H
|
C:GLY146
|
4.3
|
0.0
|
1.0
|
N
|
C:ASP149
|
4.3
|
0.0
|
1.0
|
CA
|
C:ASP145
|
4.3
|
0.0
|
1.0
|
HB2
|
C:ASP145
|
4.3
|
0.0
|
1.0
|
C
|
C:ASP141
|
4.3
|
0.0
|
1.0
|
HD11
|
C:ILE148
|
4.4
|
0.0
|
1.0
|
CB
|
C:ARG147
|
4.4
|
0.0
|
1.0
|
N
|
C:GLY146
|
4.5
|
0.0
|
1.0
|
HB2
|
C:ASP149
|
4.5
|
0.0
|
1.0
|
C
|
C:ASP145
|
4.5
|
0.0
|
1.0
|
HB3
|
C:GLU152
|
4.5
|
0.0
|
1.0
|
N
|
C:LYS142
|
4.5
|
0.0
|
1.0
|
H
|
C:ASN144
|
4.6
|
0.0
|
1.0
|
CB
|
C:GLU152
|
4.6
|
0.0
|
1.0
|
HB2
|
C:GLU152
|
4.6
|
0.0
|
1.0
|
HB3
|
C:ASP149
|
4.6
|
0.0
|
1.0
|
N
|
C:ASN143
|
4.6
|
0.0
|
1.0
|
C
|
C:ILE148
|
4.7
|
0.0
|
1.0
|
CD1
|
C:ILE148
|
4.8
|
0.0
|
1.0
|
CB
|
C:ASN143
|
4.8
|
0.0
|
1.0
|
C
|
C:GLY146
|
4.8
|
0.0
|
1.0
|
HB3
|
C:ASP141
|
4.8
|
0.0
|
1.0
|
HB2
|
C:ASN143
|
4.8
|
0.0
|
1.0
|
N
|
C:ASN144
|
4.9
|
0.0
|
1.0
|
HB3
|
C:ARG147
|
4.9
|
0.0
|
1.0
|
HA
|
C:ARG147
|
4.9
|
0.0
|
1.0
|
H
|
C:ILE148
|
4.9
|
0.0
|
1.0
|
O
|
C:GLY140
|
4.9
|
0.0
|
1.0
|
N
|
C:ASP141
|
5.0
|
0.0
|
1.0
|
CB
|
C:ASP149
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 2mle
Go back to
Calcium Binding Sites List in 2mle
Calcium binding site 2 out
of 2 in the uc(Nmr) Structure of the C-Domain of Troponin C Bound to the Anchoring Region of Troponin I
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of uc(Nmr) Structure of the C-Domain of Troponin C Bound to the Anchoring Region of Troponin I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca202
b:0.0
occ:1.00
|
O
|
C:TYR111
|
1.8
|
0.0
|
1.0
|
OD2
|
C:ASP105
|
1.8
|
0.0
|
1.0
|
OE2
|
C:GLU116
|
1.9
|
0.0
|
1.0
|
OD1
|
C:ASP109
|
1.9
|
0.0
|
1.0
|
OD2
|
C:ASP109
|
1.9
|
0.0
|
1.0
|
OE1
|
C:GLU116
|
1.9
|
0.0
|
1.0
|
CG
|
C:ASP109
|
2.2
|
0.0
|
1.0
|
CD
|
C:GLU116
|
2.2
|
0.0
|
1.0
|
CG
|
C:ASP105
|
2.8
|
0.0
|
1.0
|
H
|
C:TYR111
|
2.9
|
0.0
|
1.0
|
C
|
C:TYR111
|
3.0
|
0.0
|
1.0
|
HA
|
C:ASP105
|
3.3
|
0.0
|
1.0
|
HA
|
C:ILE112
|
3.3
|
0.0
|
1.0
|
OD1
|
C:ASP105
|
3.4
|
0.0
|
1.0
|
H
|
C:LYS106
|
3.5
|
0.0
|
1.0
|
N
|
C:TYR111
|
3.5
|
0.0
|
1.0
|
H
|
C:GLY110
|
3.6
|
0.0
|
1.0
|
H
|
C:ASP109
|
3.6
|
0.0
|
1.0
|
CG
|
C:GLU116
|
3.7
|
0.0
|
1.0
|
CB
|
C:ASP109
|
3.7
|
0.0
|
1.0
|
CB
|
C:ASP105
|
3.8
|
0.0
|
1.0
|
CA
|
C:TYR111
|
3.9
|
0.0
|
1.0
|
H
|
C:ASP113
|
3.9
|
0.0
|
1.0
|
HB2
|
C:TYR111
|
3.9
|
0.0
|
1.0
|
CA
|
C:ASP105
|
4.0
|
0.0
|
1.0
|
N
|
C:ILE112
|
4.0
|
0.0
|
1.0
|
HB2
|
C:ASP105
|
4.0
|
0.0
|
1.0
|
CA
|
C:ILE112
|
4.0
|
0.0
|
1.0
|
N
|
C:GLY110
|
4.1
|
0.0
|
1.0
|
HG2
|
C:GLU116
|
4.1
|
0.0
|
1.0
|
HD13
|
C:ILE112
|
4.1
|
0.0
|
1.0
|
HG3
|
C:GLU116
|
4.1
|
0.0
|
1.0
|
HB2
|
C:ASP109
|
4.2
|
0.0
|
1.0
|
HB3
|
C:ASP109
|
4.2
|
0.0
|
1.0
|
N
|
C:ASP109
|
4.2
|
0.0
|
1.0
|
HB2
|
C:ASP113
|
4.2
|
0.0
|
1.0
|
N
|
C:LYS106
|
4.3
|
0.0
|
1.0
|
H
|
C:ASN107
|
4.4
|
0.0
|
1.0
|
CA
|
C:ASP109
|
4.4
|
0.0
|
1.0
|
N
|
C:ASP113
|
4.4
|
0.0
|
1.0
|
C
|
C:ASP109
|
4.5
|
0.0
|
1.0
|
CB
|
C:TYR111
|
4.5
|
0.0
|
1.0
|
C
|
C:GLY110
|
4.5
|
0.0
|
1.0
|
C
|
C:ILE112
|
4.6
|
0.0
|
1.0
|
HB3
|
C:ASP113
|
4.6
|
0.0
|
1.0
|
CB
|
C:GLU116
|
4.6
|
0.0
|
1.0
|
HB3
|
C:GLU116
|
4.6
|
0.0
|
1.0
|
HD11
|
C:ILE112
|
4.6
|
0.0
|
1.0
|
HB2
|
C:GLU116
|
4.6
|
0.0
|
1.0
|
C
|
C:ASP105
|
4.7
|
0.0
|
1.0
|
HB3
|
C:ASP105
|
4.8
|
0.0
|
1.0
|
HA
|
C:TYR111
|
4.8
|
0.0
|
1.0
|
CD1
|
C:ILE112
|
4.9
|
0.0
|
1.0
|
CB
|
C:ASP113
|
4.9
|
0.0
|
1.0
|
H
|
C:ILE112
|
4.9
|
0.0
|
1.0
|
CA
|
C:GLY110
|
4.9
|
0.0
|
1.0
|
H
|
C:ALA108
|
4.9
|
0.0
|
1.0
|
|
Reference:
O.K.Baryshnikova,
I.M.Robertson,
P.Mercier,
B.D.Sykes.
The Dilated Cardiomyopathy G159D Mutation in Cardiac Troponin C Weakens the Anchoring Interaction with Troponin I. Biochemistry.
ISSN: ISSN 0006-2960
Page generated: Fri Jul 12 14:19:35 2024
|