Calcium in PDB 2n6a: uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid
Calcium Binding Sites:
The binding sites of Calcium atom in the uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid
(pdb code 2n6a). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the
uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid, PDB code: 2n6a:
Jump to Calcium binding site number:
1;
2;
3;
4;
Calcium binding site 1 out
of 4 in 2n6a
Go back to
Calcium Binding Sites List in 2n6a
Calcium binding site 1 out
of 4 in the uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca201
b:0.0
occ:1.00
|
HA
|
A:ILE27
|
3.0
|
0.0
|
1.0
|
OE1
|
A:GLU31
|
3.1
|
0.0
|
1.0
|
O
|
A:THR26
|
3.1
|
0.0
|
1.0
|
OD2
|
A:ASP24
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP20
|
3.1
|
0.0
|
1.0
|
OE2
|
A:GLU31
|
3.1
|
0.0
|
1.0
|
OD2
|
A:ASP22
|
3.1
|
0.0
|
1.0
|
H
|
A:THR28
|
3.3
|
0.0
|
1.0
|
CD
|
A:GLU31
|
3.3
|
0.0
|
1.0
|
HG23
|
A:THR28
|
3.4
|
0.0
|
1.0
|
HG22
|
A:THR26
|
3.6
|
0.0
|
1.0
|
OD1
|
A:ASP24
|
3.6
|
0.0
|
1.0
|
CG
|
A:ASP24
|
3.8
|
0.0
|
1.0
|
CG
|
A:ASP20
|
3.9
|
0.0
|
1.0
|
C
|
A:THR26
|
3.9
|
0.0
|
1.0
|
CA
|
A:ILE27
|
4.0
|
0.0
|
1.0
|
N
|
A:THR28
|
4.0
|
0.0
|
1.0
|
CG
|
A:ASP22
|
4.2
|
0.0
|
1.0
|
OD2
|
A:ASP20
|
4.2
|
0.0
|
1.0
|
CG2
|
A:THR28
|
4.4
|
0.0
|
1.0
|
N
|
A:ILE27
|
4.4
|
0.0
|
1.0
|
HB
|
A:THR28
|
4.4
|
0.0
|
1.0
|
C
|
A:ILE27
|
4.5
|
0.0
|
1.0
|
CG2
|
A:THR26
|
4.5
|
0.0
|
1.0
|
HG13
|
A:ILE27
|
4.6
|
0.0
|
1.0
|
HG21
|
A:THR26
|
4.6
|
0.0
|
1.0
|
HG21
|
A:THR28
|
4.6
|
0.0
|
1.0
|
CB
|
A:ASP22
|
4.7
|
0.0
|
1.0
|
CG
|
A:GLU31
|
4.7
|
0.0
|
1.0
|
H
|
A:THR26
|
4.8
|
0.0
|
1.0
|
HG23
|
A:ILE27
|
4.8
|
0.0
|
1.0
|
CB
|
A:THR28
|
4.8
|
0.0
|
1.0
|
HA
|
A:ASP20
|
4.9
|
0.0
|
1.0
|
H
|
A:ASP22
|
4.9
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 4 in 2n6a
Go back to
Calcium Binding Sites List in 2n6a
Calcium binding site 2 out
of 4 in the uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca202
b:0.0
occ:1.00
|
HD22
|
A:ASN60
|
2.7
|
0.0
|
1.0
|
O
|
A:THR62
|
3.1
|
0.0
|
1.0
|
OE2
|
A:GLU67
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP58
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASN60
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP56
|
3.1
|
0.0
|
1.0
|
OE1
|
A:GLU67
|
3.1
|
0.0
|
1.0
|
CD
|
A:GLU67
|
3.3
|
0.0
|
1.0
|
OG1
|
A:THR62
|
3.4
|
0.0
|
1.0
|
ND2
|
A:ASN60
|
3.5
|
0.0
|
1.0
|
CG
|
A:ASN60
|
3.7
|
0.0
|
1.0
|
H
|
A:ASP64
|
3.7
|
0.0
|
1.0
|
OD1
|
A:ASP64
|
3.8
|
0.0
|
1.0
|
C
|
A:THR62
|
3.9
|
0.0
|
1.0
|
CB
|
A:ASP64
|
3.9
|
0.0
|
1.0
|
N
|
A:ASP64
|
4.0
|
0.0
|
1.0
|
CG
|
A:ASP64
|
4.1
|
0.0
|
1.0
|
CG
|
A:ASP58
|
4.1
|
0.0
|
1.0
|
H
|
A:THR62
|
4.2
|
0.0
|
1.0
|
CG
|
A:ASP56
|
4.3
|
0.0
|
1.0
|
HA
|
A:ILE63
|
4.3
|
0.0
|
1.0
|
HA
|
A:ASP56
|
4.4
|
0.0
|
1.0
|
HD21
|
A:ASN60
|
4.4
|
0.0
|
1.0
|
HG3
|
A:GLU67
|
4.4
|
0.0
|
1.0
|
CA
|
A:ASP64
|
4.4
|
0.0
|
1.0
|
OD2
|
A:ASP58
|
4.5
|
0.0
|
1.0
|
CG
|
A:GLU67
|
4.5
|
0.0
|
1.0
|
C
|
A:ILE63
|
4.5
|
0.0
|
1.0
|
HA
|
A:ASP64
|
4.6
|
0.0
|
1.0
|
CB
|
A:THR62
|
4.6
|
0.0
|
1.0
|
N
|
A:ILE63
|
4.6
|
0.0
|
1.0
|
CA
|
A:THR62
|
4.7
|
0.0
|
1.0
|
H
|
A:ALA57
|
4.7
|
0.0
|
1.0
|
CA
|
A:ILE63
|
4.7
|
0.0
|
1.0
|
H
|
A:ASP58
|
4.8
|
0.0
|
1.0
|
HB3
|
A:ASP64
|
4.8
|
0.0
|
1.0
|
H
|
A:ASN60
|
4.8
|
0.0
|
1.0
|
N
|
A:THR62
|
4.8
|
0.0
|
1.0
|
OD2
|
A:ASP56
|
4.9
|
0.0
|
1.0
|
OD2
|
A:ASP64
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 3 out
of 4 in 2n6a
Go back to
Calcium Binding Sites List in 2n6a
Calcium binding site 3 out
of 4 in the uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca203
b:0.0
occ:1.00
|
HD22
|
A:ASN97
|
2.9
|
0.0
|
1.0
|
OD2
|
A:ASP95
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASN97
|
3.1
|
0.0
|
1.0
|
OE1
|
A:GLU104
|
3.1
|
0.0
|
1.0
|
O
|
A:TYR99
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP93
|
3.1
|
0.0
|
1.0
|
OE2
|
A:GLU104
|
3.1
|
0.0
|
1.0
|
H
|
A:SER101
|
3.2
|
0.0
|
1.0
|
CD
|
A:GLU104
|
3.3
|
0.0
|
1.0
|
ND2
|
A:ASN97
|
3.6
|
0.0
|
1.0
|
HA
|
A:ILE100
|
3.7
|
0.0
|
1.0
|
CG
|
A:ASN97
|
3.7
|
0.0
|
1.0
|
N
|
A:SER101
|
3.8
|
0.0
|
1.0
|
CB
|
A:SER101
|
3.9
|
0.0
|
1.0
|
HE21
|
A:GLN135
|
4.0
|
0.0
|
1.0
|
CG
|
A:ASP93
|
4.1
|
0.0
|
1.0
|
C
|
A:TYR99
|
4.1
|
0.0
|
1.0
|
HB3
|
A:SER101
|
4.1
|
0.0
|
1.0
|
CG
|
A:ASP95
|
4.2
|
0.0
|
1.0
|
HA
|
A:ASP93
|
4.4
|
0.0
|
1.0
|
CA
|
A:ILE100
|
4.4
|
0.0
|
1.0
|
OD2
|
A:ASP93
|
4.5
|
0.0
|
1.0
|
C
|
A:ILE100
|
4.5
|
0.0
|
1.0
|
CA
|
A:SER101
|
4.5
|
0.0
|
1.0
|
HZ2
|
A:LYS94
|
4.5
|
0.0
|
1.0
|
HE22
|
A:GLN135
|
4.5
|
0.0
|
1.0
|
HG3
|
A:GLU104
|
4.5
|
0.0
|
1.0
|
HD21
|
A:ASN97
|
4.5
|
0.0
|
1.0
|
CG
|
A:GLU104
|
4.6
|
0.0
|
1.0
|
H
|
A:ASP95
|
4.6
|
0.0
|
1.0
|
NE2
|
A:GLN135
|
4.6
|
0.0
|
1.0
|
N
|
A:ILE100
|
4.7
|
0.0
|
1.0
|
HZ3
|
A:LYS94
|
4.8
|
0.0
|
1.0
|
H
|
A:TYR99
|
4.8
|
0.0
|
1.0
|
CB
|
A:ASP95
|
4.8
|
0.0
|
1.0
|
H
|
A:ASN97
|
4.8
|
0.0
|
1.0
|
OG
|
A:SER101
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 4 out
of 4 in 2n6a
Go back to
Calcium Binding Sites List in 2n6a
Calcium binding site 4 out
of 4 in the uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of uc(Nmr) Structure of A Human Calmodulin/Connexin-36 Peptide Hybrid within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca204
b:0.0
occ:1.00
|
OE2
|
A:GLU140
|
3.1
|
0.0
|
1.0
|
OD2
|
A:ASP133
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP129
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP131
|
3.1
|
0.0
|
1.0
|
O
|
A:GLN135
|
3.1
|
0.0
|
1.0
|
OE1
|
A:GLU140
|
3.1
|
0.0
|
1.0
|
CD
|
A:GLU140
|
3.3
|
0.0
|
1.0
|
H
|
A:ASN137
|
3.5
|
0.0
|
1.0
|
OD1
|
A:ASP133
|
3.5
|
0.0
|
1.0
|
HD2
|
A:TYR99
|
3.6
|
0.0
|
1.0
|
CG
|
A:ASP133
|
3.7
|
0.0
|
1.0
|
HB3
|
A:ASN137
|
3.8
|
0.0
|
1.0
|
CG
|
A:ASP129
|
3.9
|
0.0
|
1.0
|
HE2
|
A:TYR99
|
3.9
|
0.0
|
1.0
|
CB
|
A:ASN137
|
4.0
|
0.0
|
1.0
|
N
|
A:ASN137
|
4.1
|
0.0
|
1.0
|
HA
|
A:ASP129
|
4.1
|
0.0
|
1.0
|
CG
|
A:ASP131
|
4.2
|
0.0
|
1.0
|
HA
|
A:VAL136
|
4.2
|
0.0
|
1.0
|
C
|
A:GLN135
|
4.2
|
0.0
|
1.0
|
OD2
|
A:ASP129
|
4.2
|
0.0
|
1.0
|
H
|
A:ASP131
|
4.3
|
0.0
|
1.0
|
CD2
|
A:TYR99
|
4.3
|
0.0
|
1.0
|
CE2
|
A:TYR99
|
4.5
|
0.0
|
1.0
|
CA
|
A:ASN137
|
4.7
|
0.0
|
1.0
|
CB
|
A:ASP131
|
4.7
|
0.0
|
1.0
|
CG
|
A:GLU140
|
4.7
|
0.0
|
1.0
|
H
|
A:ASP133
|
4.7
|
0.0
|
1.0
|
H
|
A:ILE130
|
4.8
|
0.0
|
1.0
|
H
|
A:GLN135
|
4.8
|
0.0
|
1.0
|
C
|
A:VAL136
|
4.8
|
0.0
|
1.0
|
CA
|
A:VAL136
|
4.8
|
0.0
|
1.0
|
CB
|
A:ASP129
|
4.9
|
0.0
|
1.0
|
N
|
A:VAL136
|
4.9
|
0.0
|
1.0
|
CA
|
A:ASP129
|
5.0
|
0.0
|
1.0
|
|
Reference:
L.Donaldson,
L.Donaldson.
N/A N/A.
Page generated: Fri Jul 12 14:23:48 2024
|