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Calcium in PDB 2oqu: High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths

Enzymatic activity of High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths

All present enzymatic activity of High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths:
3.4.21.36;

Protein crystallography data

The structure of High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths, PDB code: 2oqu was solved by C.U.Kim, Q.Hao, S.M.Gruner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.95 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.153, 58.166, 74.658, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 22.6

Other elements in 2oqu:

The structure of High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths also contains other interesting chemical elements:

Xenon (Xe) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths (pdb code 2oqu). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths, PDB code: 2oqu:

Calcium binding site 1 out of 1 in 2oqu

Go back to Calcium Binding Sites List in 2oqu
Calcium binding site 1 out of 1 in the High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of High Pressure Cryocooling of Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca480

b:17.7
occ:1.00
 OE1 A:GLU59 2.2 13.9 1.0
O A:ASN61 2.3 11.1 1.0
O A:GLN64 2.4 13.6 1.0
OE2 A:GLU69 2.4 9.3 1.0
OD1 A:ASP66 2.4 11.6 1.0
O A:HOH643 2.5 26.4 1.0
CD A:GLU59 3.3 15.7 1.0
CD A:GLU69 3.4 9.6 1.0
CG A:ASP66 3.4 11.1 1.0
C A:ASN61 3.4 11.2 1.0
C A:GLN64 3.6 15.2 1.0
OE2 A:GLU59 3.7 17.6 1.0
CG A:GLU69 3.8 9.6 1.0
N A:ASP66 3.9 12.3 1.0
N A:ASN61 4.0 10.9 1.0
CB A:ASP66 4.1 11.7 1.0
CA A:ASN61 4.1 10.7 1.0
OD2 A:ASP66 4.3 14.0 1.0
N A:GLN64 4.3 15.9 1.0
CB A:ASN61 4.4 11.2 1.0
N A:LEU62 4.4 11.5 1.0
CA A:ASN65 4.5 14.0 1.0
N A:ASN65 4.5 13.8 1.0
OE1 A:GLU69 4.5 10.0 1.0
CA A:GLN64 4.5 15.9 1.0
C A:ASN65 4.6 13.0 1.0
CG A:GLU59 4.6 9.0 1.0
N A:HIS60 4.6 9.5 1.0
CA A:ASP66 4.6 12.0 1.0
C A:LEU62 4.6 13.8 1.0
CA A:LEU62 4.6 12.3 1.0
O A:HOH782 4.7 31.6 1.0
O A:HOH809 4.8 25.0 1.0
O A:LEU62 4.8 14.9 1.0
OH A:TYR71 4.8 14.6 1.0
N A:ASN63 5.0 14.6 1.0

Reference:

C.U.Kim, Q.Hao, S.M.Gruner. High-Pressure Cryocooling For Capillary Sample Cryoprotection and Diffraction Phasing at Long Wavelengths. Acta Crystallogr.,Sect.D V. 63 653 2007.
ISSN: ISSN 0907-4449
PubMed: 17452791
DOI: 10.1107/S0907444907011924
Page generated: Tue Jul 8 07:21:51 2025

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