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Calcium in PDB 2oxs: Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C)

Enzymatic activity of Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C)

All present enzymatic activity of Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C):
3.4.21.4;

Protein crystallography data

The structure of Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C), PDB code: 2oxs was solved by A.Alok, M.Sinha, N.Singh, S.Sharma, P.Kaur, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.19 / 1.32
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 54.756, 58.484, 67.406, 90.00, 90.00, 90.00
R / Rfree (%) 15.5 / 15.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C) (pdb code 2oxs). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C), PDB code: 2oxs:

Calcium binding site 1 out of 1 in 2oxs

Go back to Calcium Binding Sites List in 2oxs
Calcium binding site 1 out of 1 in the Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca480

b:9.8
occ:1.00
OE1 A:GLU70 2.2 10.3 1.0
O A:VAL75 2.2 11.1 1.0
O A:ASN72 2.3 9.6 1.0
OE2 A:GLU80 2.3 10.8 1.0
O A:HOH810 2.3 12.2 1.0
O A:HOH814 2.3 10.9 1.0
CD A:GLU70 3.3 10.0 1.0
CD A:GLU80 3.4 12.2 1.0
C A:VAL75 3.4 11.5 1.0
C A:ASN72 3.5 9.5 1.0
CG A:GLU80 3.7 12.9 1.0
OE2 A:GLU70 3.8 11.7 1.0
CA A:VAL76 4.1 12.9 1.0
N A:GLU77 4.2 12.9 1.0
N A:VAL76 4.2 11.7 1.0
N A:VAL75 4.2 10.2 1.0
OE1 A:GLU77 4.3 13.4 1.0
CA A:ILE73 4.3 9.9 1.0
N A:ILE73 4.3 9.2 1.0
N A:ASN72 4.4 9.3 1.0
CA A:VAL75 4.4 11.2 1.0
CA A:ASN72 4.4 9.5 1.0
O A:HOH817 4.5 14.1 1.0
CG A:GLU77 4.5 14.6 1.0
OE1 A:GLU80 4.5 12.3 1.0
C A:ILE73 4.6 9.4 1.0
N A:ASP71 4.6 9.5 1.0
CG A:GLU70 4.6 9.2 1.0
C A:VAL76 4.6 13.3 1.0
CA A:GLU70 4.7 9.2 1.0
CB A:GLU77 4.8 14.6 1.0
CB A:ASN72 4.8 9.3 1.0
CD A:GLU77 4.8 15.8 1.0
CB A:GLU70 4.8 9.3 1.0
N A:ASN74 4.9 9.3 1.0
O A:HOH862 4.9 23.4 1.0
O A:ILE73 4.9 10.1 1.0

Reference:

A.Alok, M.Sinha, N.Singh, S.Sharma, P.Kaur, T.P.Singh. Crystal Structure of the Trypsin Complex with Benzamidine at High Temperature (35 C) To Be Published.
Page generated: Fri Jul 12 14:51:09 2024

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