Calcium in PDB 2pag: Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato

The structure of Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato, PDB code: 2pag was solved by A.A.Fedorov, U.Ramagopal, R.Toro, E.V.Fedorov, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center For Structural Genomics(Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	23.71 / 1.60
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	47.424, 47.424, 122.518, 90.00, 90.00, 90.00
R / Rfree (%)	23.3 / 22.2

The binding sites of Calcium atom in the Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato (pdb code 2pag). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato, PDB code: 2pag:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:14.0 occ:1.00 OE1 A:GLU101 2.1 13.5 1.0 OG1 A:THR105 2.4 11.8 1.0 OD1 A:ASP103 2.5 11.7 1.0 OD2 A:ASP103 2.5 12.7 1.0 CG A:ASP103 2.8 14.1 1.0 CB A:THR105 3.3 12.7 1.0 CD A:GLU101 3.4 18.5 1.0 CA A:CA202 4.1 6.4 1.0 OE2 A:GLU101 4.1 20.1 1.0 CG2 A:THR105 4.1 14.4 1.0 O A:HOH316 4.3 28.3 1.0 CB A:ASP103 4.4 14.1 1.0 O A:HOH280 4.4 32.0 1.0 CG A:GLU101 4.4 15.5 1.0 CB A:GLU101 4.4 15.2 1.0 N A:THR105 4.4 11.8 1.0 CA A:THR105 4.5 11.4 1.0 O A:HOH230 4.6 22.6 1.0 O A:HOH239 4.6 25.6 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Protein PSPTO_5518 From Pseudomonas Syringae Pv. Tomato within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca202 b:6.4 occ:1.00 OD2 A:ASP103 2.4 12.7 1.0 O A:HOH280 2.4 32.0 1.0 O A:HOH308 2.5 29.3 1.0 O A:HOH316 2.6 28.3 1.0 O A:HOH282 2.8 26.7 1.0 CG A:ASP103 3.5 14.1 1.0 CA A:CA201 4.1 14.0 1.0 CB A:ASP103 4.1 14.1 1.0 O A:HOH239 4.3 25.6 1.0 OD1 A:ASP103 4.5 11.7 1.0

A.A.Fedorov, U.Ramagopal, R.Toro, E.V.Fedorov, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of Conserved Hypothetical Protein From Pseudomonas Syringae Pv. Tomato. To Be Published.