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Calcium in PDB 2q36: Actin Dimer Cross-Linked Between Residues 191 and 374 and Complexed with Kabiramide C

Protein crystallography data

The structure of Actin Dimer Cross-Linked Between Residues 191 and 374 and Complexed with Kabiramide C, PDB code: 2q36 was solved by M.R.Sawaya, I.Pashkov, D.S.Kudryashov, E.Reisler, T.O.Yeates, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.17 / 2.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 40.539, 74.276, 144.474, 90.00, 90.00, 90.00
R / Rfree (%) 17.5 / 22.3

Calcium Binding Sites:

The binding sites of Calcium atom in the Actin Dimer Cross-Linked Between Residues 191 and 374 and Complexed with Kabiramide C (pdb code 2q36). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Actin Dimer Cross-Linked Between Residues 191 and 374 and Complexed with Kabiramide C, PDB code: 2q36:

Calcium binding site 1 out of 1 in 2q36

Go back to Calcium Binding Sites List in 2q36
Calcium binding site 1 out of 1 in the Actin Dimer Cross-Linked Between Residues 191 and 374 and Complexed with Kabiramide C


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Actin Dimer Cross-Linked Between Residues 191 and 374 and Complexed with Kabiramide C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:17.6
occ:1.00
O1B A:ATP400 2.2 13.9 1.0
O A:HOH455 2.2 17.1 1.0
O2G A:ATP400 2.3 11.1 1.0
O A:HOH430 2.3 14.6 1.0
O A:HOH413 2.4 18.6 1.0
O A:HOH410 2.5 10.9 1.0
PG A:ATP400 3.4 11.8 1.0
PB A:ATP400 3.5 11.8 1.0
O3B A:ATP400 3.8 12.4 1.0
O1G A:ATP400 3.9 9.7 1.0
O A:HOH456 4.0 20.1 1.0
OE1 A:GLN137 4.1 19.7 1.0
O3A A:ATP400 4.1 11.3 1.0
O1A A:ATP400 4.3 15.2 1.0
NZ A:LYS18 4.4 22.8 1.0
CA A:GLY13 4.4 23.3 1.0
CD A:GLN137 4.5 19.8 1.0
O A:HOH458 4.5 22.7 1.0
OD2 A:ASP154 4.5 33.0 1.0
OD1 A:ASP11 4.7 24.4 1.0
PA A:ATP400 4.7 12.6 1.0
OD2 A:ASP11 4.7 23.4 1.0
O3G A:ATP400 4.7 17.6 1.0
O2B A:ATP400 4.7 8.1 1.0
OD1 A:ASP154 4.9 36.9 1.0

Reference:

M.R.Sawaya, D.S.Kudryashov, I.Pashkov, H.Adisetiyo, E.Reisler, T.O.Yeates. Multiple Crystal Structures of Actin Dimers and Their Implications For Interactions in the Actin Filament. Acta Crystallogr.,Sect.D V. 64 454 2008.
ISSN: ISSN 0907-4449
PubMed: 18391412
DOI: 10.1107/S0907444908003351
Page generated: Fri Jul 12 15:24:15 2024

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